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The map label for this gene is yafV [H]

Identifier: 66768221

GI number: 66768221

Start: 2295606

End: 2296406

Strand: Direct

Name: yafV [H]

Synonym: XC_1900

Alternate gene names: 66768221

Gene position: 2295606-2296406 (Clockwise)

Preceding gene: 66768220

Following gene: 66768224

Centisome position: 44.59

GC content: 64.54

Gene sequence:

>801_bases
ATGCACGACCTGCGCATTTCCCTCGTTCAAGGAAGCACCCGCTGGCACGATCCAGCCGGCAATCGCGACTATTACGGCGC
GTTGCTGGAGCCGTTGGCCGGGCAGAGCGATCTGGTGATCCTGCCGGAAACCTTCACCAGCGGGTTTTCCAACGAGGCCA
TCGACAAGGCCGAAGACATGGACGGGCCCACCGTGGCGTGGATCCGCACGCAGGCCGCGCGGTTGGGTGCGGCGATTACC
GGCAGCGTGCAGTTGCGTACCGAGCACGGTGTGTTCAACCGGCTGCTGTGGGCCACGCCGGATGGGGCGCTGCAGTACTA
CGACAAACGCCACCTGTTCCGCTTCGGCAACGAGCATCTGCGCTATGCAGCCGGGCGCGAGCGCCTCTGCGTCGAGTGGA
AGGGGTGGCGGATCAATCCACAGGTCTGCTACGACCTGCGCTTTCCGGTGTTTTGCCGTAACCGCTTCGATGTAGAGCGC
CCGGGCCAACTGGATTTCGATCTGCAGCTCTTCGTCGCCAATTGGCCTTCGGCACGTGCCTACGCCTGGAAGACACTGCT
GCGCGCGCGTGCGATCGAGAACCTGTGCTTCGTGGCGGCGGTCAATCGCGTCGGGGTGGACGGCAACCAGTTGCACTACG
CGGGCGACAGCGCGGTGATTGATTTCCTCGGCCAGCCGCAAGTGGAAATCCGCGAACAGGAACAGGTGGTGACCACCACG
ATCAGCGCGGCCGCGCTGGCCGAGCACCGCGCGCGCTTTCCGGCGATGCTGGATGGGGACAGCTTTGTGCTGGGCGAGTA
G

Upstream 100 bases:

>100_bases
CCATCGCCTGGCGTGATCCTGATCTCTGCCCGTTGACCTCGCGCCTGCTGGTGCCGCTTTTCCCGTTCCCCACTCTCGAT
TCCCCATTCCCGAGCCAACC

Downstream 100 bases:

>100_bases
GTGTGGGCGGGGATTGGGGAGTCGGGATTGGGATTGGGGGTTTGCAAGGGCGGGAGTTCTGACGCCTGATTTATCTGCGG
GCTGCTTCCGCCTGGAGCAG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAGQSDLVILPETFTSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAIT
GSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDVER
PGQLDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQEQVVTTT
ISAAALAEHRARFPAMLDGDSFVLGE

Sequences:

>Translated_266_residues
MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAGQSDLVILPETFTSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAIT
GSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDVER
PGQLDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQEQVVTTT
ISAAALAEHRARFPAMLDGDSFVLGE
>Mature_266_residues
MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAGQSDLVILPETFTSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAIT
GSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDVER
PGQLDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQEQVVTTT
ISAAALAEHRARFPAMLDGDSFVLGE

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786412, Length=269, Percent_Identity=47.2118959107807, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30026; Mature: 30026

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAGQSDLVILPETFTSGFSNEAIDKAEDM
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCHHCCCCCCCHHHHHHCC
DGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHL
CCCEEEEEEHHHHHHCEEEECEEEEEECCCHHHHEEEECCCHHHHHHHHHHHHHHCCHHH
RYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDVERPGQLDFDLQLFVANWPSARA
EECCCCCEEEEEECCEEECCEEEEEECCCEEECCCCCCCCCCCCCEEEEEEEECCCCCHH
YAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQEQVVTTT
HHHHHHHHHHHHHHHHEEHHHHHCCCCCCEEEECCCHHHHHHCCCCCEEECCCHHHHHHH
ISAAALAEHRARFPAMLDGDSFVLGE
HHHHHHHHHHHCCCEEECCCEEEECC
>Mature Secondary Structure
MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAGQSDLVILPETFTSGFSNEAIDKAEDM
CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCHHCCCCCCCHHHHHHCC
DGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHL
CCCEEEEEEHHHHHHCEEEECEEEEEECCCHHHHEEEECCCHHHHHHHHHHHHHHCCHHH
RYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDVERPGQLDFDLQLFVANWPSARA
EECCCCCEEEEEECCEEECCEEEEEECCCEEECCCCCCCCCCCCCEEEEEEEECCCCCHH
YAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQEQVVTTT
HHHHHHHHHHHHHHHHEEHHHHHCCCCCCEEEECCCHHHHHHCCCCCEEECCCHHHHHHH
ISAAALAEHRARFPAMLDGDSFVLGE
HHHHHHHHHHHCCCEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]