Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

Click here to switch to the map view.

The map label for this gene is 66768198

Identifier: 66768198

GI number: 66768198

Start: 2271521

End: 2271928

Strand: Direct

Name: 66768198

Synonym: XC_1877

Alternate gene names: NA

Gene position: 2271521-2271928 (Clockwise)

Preceding gene: 66768197

Following gene: 66768199

Centisome position: 44.12

GC content: 68.38

Gene sequence:

>408_bases
GTGATCCCCACCCTCAGTGCCGACACCGCCGAGCACTATCCCTGGGGCGAGGCCTGCGATGGCTGGCACCTGCTGCGCGA
CCCGGGGCTCAGCGTGCTCGAAGAGCACATGCCACCGGGCGCGATGGAGCAACGCCACCGGCATAGCCGTGCACGGCATT
TTTTCTATGTGCTCGCCGGCGAGGTGATGCTGCAGGTGGATGGCGAGCAGCACGTGCTCAAGGTGGGCCAGGGCCTGCAT
GTGACGCCCGGCTCGACGCATCAGATGCACAACCTGTCCGACGAGCAGGCGCGGTTCCTGGTGATTTCCACGCCGCATGG
CAAGGCCGAGCTTACGACCACTGCCGGCGCCCCTGTGGCCACCGCCGCCGTGGTTGCACCGGGCGCCGCGCCAACGGAGG
CCGACTGA

Upstream 100 bases:

>100_bases
AGGGACGCACACCGGAAGGCAGCCTGGCCGCACGCGTGTCGCCCGGTGCGGCGGCCGACCTGCAGCTGGATGTGCTGCGC
GCCCGCTGGGAGGCGCTGCA

Downstream 100 bases:

>100_bases
TGGCCAAGCGCTATCTGGTCCTGGCGATGCGCCAGCCCGACTTCCCGGCCGATGTGGTGCAGCCGCATCGCGATTTTCTG
GATGCGCTGCGAGCCGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Domain Protein; Alginate Biosynthesis Protein Alga; Cupin 2 Barrel; Cupin Domain-Containing Protein

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MIPTLSADTAEHYPWGEACDGWHLLRDPGLSVLEEHMPPGAMEQRHRHSRARHFFYVLAGEVMLQVDGEQHVLKVGQGLH
VTPGSTHQMHNLSDEQARFLVISTPHGKAELTTTAGAPVATAAVVAPGAAPTEAD

Sequences:

>Translated_135_residues
MIPTLSADTAEHYPWGEACDGWHLLRDPGLSVLEEHMPPGAMEQRHRHSRARHFFYVLAGEVMLQVDGEQHVLKVGQGLH
VTPGSTHQMHNLSDEQARFLVISTPHGKAELTTTAGAPVATAAVVAPGAAPTEAD
>Mature_135_residues
MIPTLSADTAEHYPWGEACDGWHLLRDPGLSVLEEHMPPGAMEQRHRHSRARHFFYVLAGEVMLQVDGEQHVLKVGQGLH
VTPGSTHQMHNLSDEQARFLVISTPHGKAELTTTAGAPVATAAVVAPGAAPTEAD

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14557; Mature: 14557

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPTLSADTAEHYPWGEACDGWHLLRDPGLSVLEEHMPPGAMEQRHRHSRARHFFYVLAG
CCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCHHHHHHHHHHHHEEEEEEEC
EVMLQVDGEQHVLKVGQGLHVTPGSTHQMHNLSDEQARFLVISTPHGKAELTTTAGAPVA
EEEEEECCCHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCH
TAAVVAPGAAPTEAD
HHEEECCCCCCCCCC
>Mature Secondary Structure
MIPTLSADTAEHYPWGEACDGWHLLRDPGLSVLEEHMPPGAMEQRHRHSRARHFFYVLAG
CCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCHHHHHHHHHHHHEEEEEEEC
EVMLQVDGEQHVLKVGQGLHVTPGSTHQMHNLSDEQARFLVISTPHGKAELTTTAGAPVA
EEEEEECCCHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCH
TAAVVAPGAAPTEAD
HHEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA