| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is argC
Identifier: 66768196
GI number: 66768196
Start: 2269203
End: 2270153
Strand: Direct
Name: argC
Synonym: XC_1875
Alternate gene names: 66768196
Gene position: 2269203-2270153 (Clockwise)
Preceding gene: 66768195
Following gene: 66768197
Centisome position: 44.07
GC content: 66.04
Gene sequence:
>951_bases ATGACTGTTCAACCAACCACCATCGGCATTGTGGGCGCACGCGGCCATACCGGCGCGGAGCTGATCAAGCTGATTGCCGC GCACCCGCAGTTGCAGCTGGTGTTCGTGTCCTCGCGCGAGCTCGCCGGCCAGCGCGTGGCCGAGCACAGCGATGGCTATG AGGGCGAGCTGCGCTATGAAAGCCTGGACGCCGACGCGGTGGCTGCCAAGGCCGCGGACGTGGTGATCCTGGCATTGCCC AACGGCAAGGCCGAGCCCTTCGTGGCGGCCATCGATGCCAACCGGCCGCAGACGTTGCTGATCGACCTGTCGGCCGACTA CCGCTTCGATCCGGCCTGGTATTACGGCTTGCCGGAGCTTACCCGCCACACCTACGCCGGGCAGCGCCGCATCAGCAATC CCGGCTGCTATGCCACGGCCATGCAGCTGGCGATCACGCCGCTGCGCGAGCAACTGGCAGGGCCGCCGCAGTGCTTTGGC GTCTCCGGCTATTCCGGTGCGGGCACCACGCCTTCAGACAAGAACAATCCCGCGTTGCTGGCCGACAACCTGATGCCGTA CGCGCTGACCAACCACATGCACGAGCGCGAAGTCTCCGCGCAGCTCGGCGTGCCGGTGGAATTCATGCCGCATGTGGCGC CGCATTTCCGCGGCATCACCATGACCGTGAACCTGTGGCTGCAGCAGCCGTTGACGCGCGAGCAGATCCACGCACGCTAC CTGGAGCGGTATGCGCATGAGCCCTTGATCGAGATCGTGGACGAGGCGCCGTGGGTGAGCCGTATCGCCGGCACCCAGGG CGTGCAGATCGGTGGGTTCACCATGGCGCCGGGCAACAAGCGCGTGGTGGTGGTGGCAACGCTGGACAACCTGCTCAAGG GTGCGGCCACGCAGGCCATGCAGAACCTCAACCTGGCGCTGGGCTGGGACGAATTGACCGCAATTGGCTGA
Upstream 100 bases:
>100_bases ACGCCGACGGCACGCCACGCGACACCGTGGTGTTTTCCATCATCAATGCGGAATGGGCCGGGGTGAAACGCCACCTGCAG TTCCGCCTGGACGCACACGC
Downstream 100 bases:
>100_bases TGCGCGTCCCTCGCAAGCGCCCGCACATCCATCTGCGGGGATTCAATTGGACGACTTATTTCGAGACGCTTTCCGATGAC CAATCTGTTGTGGCAAAAAC
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTVQPTTIGIVGARGHTGAELIKLIAAHPQLQLVFVSSRELAGQRVAEHSDGYEGELRYESLDADAVAAKAADVVILALP NGKAEPFVAAIDANRPQTLLIDLSADYRFDPAWYYGLPELTRHTYAGQRRISNPGCYATAMQLAITPLREQLAGPPQCFG VSGYSGAGTTPSDKNNPALLADNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIHARY LERYAHEPLIEIVDEAPWVSRIAGTQGVQIGGFTMAPGNKRVVVVATLDNLLKGAATQAMQNLNLALGWDELTAIG
Sequences:
>Translated_316_residues MTVQPTTIGIVGARGHTGAELIKLIAAHPQLQLVFVSSRELAGQRVAEHSDGYEGELRYESLDADAVAAKAADVVILALP NGKAEPFVAAIDANRPQTLLIDLSADYRFDPAWYYGLPELTRHTYAGQRRISNPGCYATAMQLAITPLREQLAGPPQCFG VSGYSGAGTTPSDKNNPALLADNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIHARY LERYAHEPLIEIVDEAPWVSRIAGTQGVQIGGFTMAPGNKRVVVVATLDNLLKGAATQAMQNLNLALGWDELTAIG >Mature_315_residues TVQPTTIGIVGARGHTGAELIKLIAAHPQLQLVFVSSRELAGQRVAEHSDGYEGELRYESLDADAVAAKAADVVILALPN GKAEPFVAAIDANRPQTLLIDLSADYRFDPAWYYGLPELTRHTYAGQRRISNPGCYATAMQLAITPLREQLAGPPQCFGV SGYSGAGTTPSDKNNPALLADNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIHARYL ERYAHEPLIEIVDEAPWVSRIAGTQGVQIGGFTMAPGNKRVVVVATLDNLLKGAATQAMQNLNLALGWDELTAIG
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1790396, Length=339, Percent_Identity=29.7935103244838, Blast_Score=121, Evalue=7e-29, Organism=Saccharomyces cerevisiae, GI6320913, Length=323, Percent_Identity=47.3684210526316, Blast_Score=295, Evalue=7e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGC_XANC8 (Q4UVI5)
Other databases:
- EMBL: CP000050 - RefSeq: YP_242958.1 - HSSP: Q9X2A2 - ProteinModelPortal: Q4UVI5 - SMR: Q4UVI5 - STRING: Q4UVI5 - GeneID: 3380422 - GenomeReviews: CP000050_GR - KEGG: xcb:XC_1875 - eggNOG: COG0002 - HOGENOM: HBG294213 - OMA: VCRIAVH - ProtClustDB: PRK00436 - BioCyc: XCAM314565:XC_1875-MONOMER - GO: GO:0005737 - HAMAP: MF_00150 - InterPro: IPR023013 - InterPro: IPR000706 - InterPro: IPR016040 - InterPro: IPR000534 - Gene3D: G3DSA:3.40.50.720 - SMART: SM00859 - TIGRFAMs: TIGR01850
Pfam domain/function: PF01118 Semialdhyde_dh
EC number: =1.2.1.38
Molecular weight: Translated: 34264; Mature: 34132
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS01224 ARGC
Important sites: ACT_SITE 136-136
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQPTTIGIVGARGHTGAELIKLIAAHPQLQLVFVSSRELAGQRVAEHSDGYEGELRYE CCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEE SLDADAVAAKAADVVILALPNGKAEPFVAAIDANRPQTLLIDLSADYRFDPAWYYGLPEL CCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEECCCEECCCHHH TRHTYAGQRRISNPGCYATAMQLAITPLREQLAGPPQCFGVSGYSGAGTTPSDKNNPALL HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEE ADNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIHARY ECCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCEEEEEEEEECCCCCHHHHHHHH LERYAHEPLIEIVDEAPWVSRIAGTQGVQIGGFTMAPGNKRVVVVATLDNLLKGAATQAM HHHHHCCHHHHHHHCCCHHHHHCCCCCEEECCEEECCCCCEEEEEEEHHHHHHHHHHHHH QNLNLALGWDELTAIG HHCCEEECCHHHHCCC >Mature Secondary Structure TVQPTTIGIVGARGHTGAELIKLIAAHPQLQLVFVSSRELAGQRVAEHSDGYEGELRYE CCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEE SLDADAVAAKAADVVILALPNGKAEPFVAAIDANRPQTLLIDLSADYRFDPAWYYGLPEL CCCCHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEECCCEECCCHHH TRHTYAGQRRISNPGCYATAMQLAITPLREQLAGPPQCFGVSGYSGAGTTPSDKNNPALL HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEE ADNLMPYALTNHMHEREVSAQLGVPVEFMPHVAPHFRGITMTVNLWLQQPLTREQIHARY ECCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHCCEEEEEEEEECCCCCHHHHHHHH LERYAHEPLIEIVDEAPWVSRIAGTQGVQIGGFTMAPGNKRVVVVATLDNLLKGAATQAM HHHHHCCHHHHHHHCCCHHHHHCCCCCEEECCEEECCCCCEEEEEEEHHHHHHHHHHHHH QNLNLALGWDELTAIG HHCCEEECCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA