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The map label for this gene is yebA [C]

Identifier: 66768178

GI number: 66768178

Start: 2253714

End: 2254559

Strand: Reverse

Name: yebA [C]

Synonym: XC_1857

Alternate gene names: 66768178

Gene position: 2254559-2253714 (Counterclockwise)

Preceding gene: 66768179

Following gene: 66768177

Centisome position: 43.79

GC content: 68.56

Gene sequence:

>846_bases
ATGCGTGCACTGCTGATGGGCGCGGCGCTTGCGCTGGCGCCGTGCACATTGCTCACGGTGCCGGTGTCTGCGCAGGAGCC
CGCCGCTGCAGACGGGCGCGTGGTGTTTCCGGCCAGCGCCTCGCAAGGGGCGATGGTGATCGGCAAAGTGCCGGCGGGCA
GCCGGGTCGAGTACACCGGCCGCGCGCTGCGCGTGAGTGGTTACGGCAGCGTGGTGTTCGGCATCGGCCGTGACGCCACC
GGCCCGTTGCAGGTGCAGATCACCCGCGCCGATGGTGGAAAGGAGACCGCAACCATCGCGGTCACTCCGCGCGACTGGCC
GGTGGAGCGCGTCAACGGCGTGCCGCCAAAGACCGTCAACCCACCACCGGCCATTGCCGAGCGCATCAAGCGCGAGCAGG
CGCAGGTCACTGCCGCACGCGATCGCGACGACCCACGCGCCGATTTTGCGCAGCCCTTCGTGTGGCCGGTACAGGGCCGC
ATCAGCGGCCGCTTCGGCAATGCGCGCGTGTATAACGGCCAGCCTGGCGCCGGTCATTCGGGCATGGATATCGCCGTGCC
CACCGGCACGCCGGTCAAGGCGCCCGCCGCTGGCGTGGTGACCTTTGCGGCACCGGATCTGTACCTGACCGGCGGCACGT
TGCTGCTTGACCACGGCTTCGGCATCAGTTCGAACTTCCTGCACCTGTCGCGGATCGACGTGAAGGTAGGCGATCGCGTG
GAACAGGGCCAGGTCATCGCCGCGGTGGGCGCCACCGGGCGCGCGACCGGGCCGCATCTGCATTGGGGGATGAATTGGTT
CGATGTGCGTATCGACCCCTTGTTGGTGCTTGAGCGCGGGAAGTAA

Upstream 100 bases:

>100_bases
GCTCACGCATCGCTGCAACCTGGGTCAACGGCCAGCAGGTGTGGGATGGCGAACAGCTGGTGGGCAGTGCCGCCGGCCAG
CGCCTGACCTTCGACCGCTG

Downstream 100 bases:

>100_bases
GTGCCAGTGGGCGGCTTTTCCCTTCTCCCCTCGGGAGAAGGTGGCGCGTAGCGCCGGATGAGGGTGCGGCTGCTACTGGT
TAACTGAGTAACCGTACCCT

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRALLMGAALALAPCTLLTVPVSAQEPAAADGRVVFPASASQGAMVIGKVPAGSRVEYTGRALRVSGYGSVVFGIGRDAT
GPLQVQITRADGGKETATIAVTPRDWPVERVNGVPPKTVNPPPAIAERIKREQAQVTAARDRDDPRADFAQPFVWPVQGR
ISGRFGNARVYNGQPGAGHSGMDIAVPTGTPVKAPAAGVVTFAAPDLYLTGGTLLLDHGFGISSNFLHLSRIDVKVGDRV
EQGQVIAAVGATGRATGPHLHWGMNWFDVRIDPLLVLERGK

Sequences:

>Translated_281_residues
MRALLMGAALALAPCTLLTVPVSAQEPAAADGRVVFPASASQGAMVIGKVPAGSRVEYTGRALRVSGYGSVVFGIGRDAT
GPLQVQITRADGGKETATIAVTPRDWPVERVNGVPPKTVNPPPAIAERIKREQAQVTAARDRDDPRADFAQPFVWPVQGR
ISGRFGNARVYNGQPGAGHSGMDIAVPTGTPVKAPAAGVVTFAAPDLYLTGGTLLLDHGFGISSNFLHLSRIDVKVGDRV
EQGQVIAAVGATGRATGPHLHWGMNWFDVRIDPLLVLERGK
>Mature_281_residues
MRALLMGAALALAPCTLLTVPVSAQEPAAADGRVVFPASASQGAMVIGKVPAGSRVEYTGRALRVSGYGSVVFGIGRDAT
GPLQVQITRADGGKETATIAVTPRDWPVERVNGVPPKTVNPPPAIAERIKREQAQVTAARDRDDPRADFAQPFVWPVQGR
ISGRFGNARVYNGQPGAGHSGMDIAVPTGTPVKAPAAGVVTFAAPDLYLTGGTLLLDHGFGISSNFLHLSRIDVKVGDRV
EQGQVIAAVGATGRATGPHLHWGMNWFDVRIDPLLVLERGK

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=168, Percent_Identity=33.9285714285714, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 29433; Mature: 29433

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALLMGAALALAPCTLLTVPVSAQEPAAADGRVVFPASASQGAMVIGKVPAGSRVEYTG
CCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEECC
RALRVSGYGSVVFGIGRDATGPLQVQITRADGGKETATIAVTPRDWPVERVNGVPPKTVN
CEEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHCCCCCCCCC
PPPAIAERIKREQAQVTAARDRDDPRADFAQPFVWPVQGRISGRFGNARVYNGQPGAGHS
CCHHHHHHHHHHHHHEEEECCCCCCCCHHCCCEEEEECCEEECCCCCEEEECCCCCCCCC
GMDIAVPTGTPVKAPAAGVVTFAAPDLYLTGGTLLLDHGFGISSNFLHLSRIDVKVGDRV
CCEEEECCCCCCCCCCCCEEEEECCCEEEECCEEEEECCCCCCCCEEEEEEEEEEECCCC
EQGQVIAAVGATGRATGPHLHWGMNWFDVRIDPLLVLERGK
CCCCEEEEECCCCCCCCCEEEECCCEEEEEECEEEEEECCC
>Mature Secondary Structure
MRALLMGAALALAPCTLLTVPVSAQEPAAADGRVVFPASASQGAMVIGKVPAGSRVEYTG
CCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCEEEECC
RALRVSGYGSVVFGIGRDATGPLQVQITRADGGKETATIAVTPRDWPVERVNGVPPKTVN
CEEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHCCCCCCCCC
PPPAIAERIKREQAQVTAARDRDDPRADFAQPFVWPVQGRISGRFGNARVYNGQPGAGHS
CCHHHHHHHHHHHHHEEEECCCCCCCCHHCCCEEEEECCEEECCCCCEEEECCCCCCCCC
GMDIAVPTGTPVKAPAAGVVTFAAPDLYLTGGTLLLDHGFGISSNFLHLSRIDVKVGDRV
CCEEEECCCCCCCCCCCCEEEEECCCEEEECCEEEEECCCCCCCCEEEEEEEEEEECCCC
EQGQVIAAVGATGRATGPHLHWGMNWFDVRIDPLLVLERGK
CCCCEEEEECCCCCCCCCEEEECCCEEEEEECEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]