Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

Click here to switch to the map view.

The map label for this gene is yaiI [C]

Identifier: 66768148

GI number: 66768148

Start: 2220804

End: 2221286

Strand: Reverse

Name: yaiI [C]

Synonym: XC_1827

Alternate gene names: 66768148

Gene position: 2221286-2220804 (Counterclockwise)

Preceding gene: 66768151

Following gene: 66768147

Centisome position: 43.14

GC content: 70.6

Gene sequence:

>483_bases
ATGAATACGCCACTCCCGCCAGGTCTTGCGCAGATCTGGGTCGACGCCGACGCCTGCCCGGCGGTCATTCGCGACATTTT
GTTCCGCGCCGCCCAGCGCACCGGCATCCCTGTCACCTTGGTCGCCAACCACTTCCTGCGCACGCCAACCCTGGCCCATG
TGCGGGCGCTGCAGGTGCCCGGCGGCCCGGATGCGGCCGATGACGCCATTGCCGAGCGGGTCAACGCTGGCGATCTGGTA
GTGACCCAGGACATTCCTTTGGCGGCGCGCGTACTGGAACGCGGCGCCGCAGCGGTCAGTCCGCGCGGGGAGCCGTTCAG
CAGCGACAGCATCGCCGAGCGCCTGTCGGTGCGCGGCTTTCTGGAAGAATTGCGCGGCGCCGGCGTGGCCACCGGCGGGC
CGCCTGCGCTGCACGCACGCGACCGCCAGGCGTTCGCGGCACAGCTGGACCGCTGGCTGGCACGGCAATCCGCCCGGTCA
TGA

Upstream 100 bases:

>100_bases
GTACTCGTGTTTTATGCAAAAAGCGACACCTTCGGACAAAACTTTTGCTGTCAGGCGCATTCTGACCCCCCGTCAGGCCA
TTTCCCTCCCGATTTCCTAG

Downstream 100 bases:

>100_bases
AGACCCTCGCGCGGAGCCCGCAGGCGTATCATGACCGCCCTTTGCAACTGGTTTCCCGATGGCTCTCACCGCCACCGTCC
GCAGGGCGGAACTGCAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNTPLPPGLAQIWVDADACPAVIRDILFRAAQRTGIPVTLVANHFLRTPTLAHVRALQVPGGPDAADDAIAERVNAGDLV
VTQDIPLAARVLERGAAAVSPRGEPFSSDSIAERLSVRGFLEELRGAGVATGGPPALHARDRQAFAAQLDRWLARQSARS

Sequences:

>Translated_160_residues
MNTPLPPGLAQIWVDADACPAVIRDILFRAAQRTGIPVTLVANHFLRTPTLAHVRALQVPGGPDAADDAIAERVNAGDLV
VTQDIPLAARVLERGAAAVSPRGEPFSSDSIAERLSVRGFLEELRGAGVATGGPPALHARDRQAFAAQLDRWLARQSARS
>Mature_160_residues
MNTPLPPGLAQIWVDADACPAVIRDILFRAAQRTGIPVTLVANHFLRTPTLAHVRALQVPGGPDAADDAIAERVNAGDLV
VTQDIPLAARVLERGAAAVSPRGEPFSSDSIAERLSVRGFLEELRGAGVATGGPPALHARDRQAFAAQLDRWLARQSARS

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family

Homologues:

Organism=Escherichia coli, GI87081732, Length=141, Percent_Identity=55.3191489361702, Blast_Score=166, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1827_XANC8 (Q4UVN3)

Other databases:

- EMBL:   CP000050
- RefSeq:   YP_242910.1
- STRING:   Q4UVN3
- GeneID:   3380374
- GenomeReviews:   CP000050_GR
- KEGG:   xcb:XC_1827
- eggNOG:   COG1671
- HOGENOM:   HBG363074
- OMA:   PLASRCV
- PhylomeDB:   Q4UVN3
- ProtClustDB:   CLSK451485
- BioCyc:   XCAM314565:XC_1827-MONOMER
- HAMAP:   MF_00489
- InterPro:   IPR003791

Pfam domain/function: PF02639 DUF188

EC number: NA

Molecular weight: Translated: 16924; Mature: 16924

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPLPPGLAQIWVDADACPAVIRDILFRAAQRTGIPVTLVANHFLRTPTLAHVRALQVP
CCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHEEEECC
GGPDAADDAIAERVNAGDLVVTQDIPLAARVLERGAAAVSPRGEPFSSDSIAERLSVRGF
CCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
LEELRGAGVATGGPPALHARDRQAFAAQLDRWLARQSARS
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTPLPPGLAQIWVDADACPAVIRDILFRAAQRTGIPVTLVANHFLRTPTLAHVRALQVP
CCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHEEEECC
GGPDAADDAIAERVNAGDLVVTQDIPLAARVLERGAAAVSPRGEPFSSDSIAERLSVRGF
CCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
LEELRGAGVATGGPPALHARDRQAFAAQLDRWLARQSARS
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA