| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is yaeQ [H]
Identifier: 66768147
GI number: 66768147
Start: 2220197
End: 2220745
Strand: Reverse
Name: yaeQ [H]
Synonym: XC_1826
Alternate gene names: 66768147
Gene position: 2220745-2220197 (Counterclockwise)
Preceding gene: 66768148
Following gene: 66768146
Centisome position: 43.13
GC content: 66.48
Gene sequence:
>549_bases ATGGCTCTCACCGCCACCGTCCGCAGGGCGGAACTGCAGATCAGCGACATGGATCGCGGCTACTACGCCAACCATTCGCT GACCCTGGCCCAGCACCCTTCCGAAACCGACGAACGCCTGATGGTGCGCCTGCTGGCGTTTGCCCTGTTCGCCGACGACC GCCTGGAGTTCGGCCGCGGGCTGAGCAATGACGACGAACCGGATCTATGGCGGCGCGACTACACCGGCGACCCCGACCTG TGGATCGACCTGGGCCAGCCCGACGAGAGCCGCGTCCGCAAGGCCTGCAACCGGTCGCGGGAAGTCGTGGTCATCGGGTA CGGCGGCCAGGCCACCGAGACTTGGTGGAAGAAGCATGCCAATGCTCTCGGCCGGCACCGCAACCTGCGCGTGCTGGAGC TCGAATCGCAGGCCACCGAGGCGCTTGGTGCGCTGATCCAGCGCGGCATGCGCTTTGACGTAATCATCCAGGACGGCGAA GTGCAGATGCTGGCCGACCAGGGCACCGTCACGCTCACTCCGATCGTGCGACAAGCCCCGGCGGAATGA
Upstream 100 bases:
>100_bases CAGCTGGACCGCTGGCTGGCACGGCAATCCGCCCGGTCATGAAGACCCTCGCGCGGAGCCCGCAGGCGTATCATGACCGC CCTTTGCAACTGGTTTCCCG
Downstream 100 bases:
>100_bases GCACGCGTTGCGATGTGCTGGTCGTCGGCGCCGGCGCTGCCGGGCTGATGAGCGCCTTCACGGCCGGCCGCCGCGGGCGG CAGGTGCTGGTGATCGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MALTATVRRAELQISDMDRGYYANHSLTLAQHPSETDERLMVRLLAFALFADDRLEFGRGLSNDDEPDLWRRDYTGDPDL WIDLGQPDESRVRKACNRSREVVVIGYGGQATETWWKKHANALGRHRNLRVLELESQATEALGALIQRGMRFDVIIQDGE VQMLADQGTVTLTPIVRQAPAE
Sequences:
>Translated_182_residues MALTATVRRAELQISDMDRGYYANHSLTLAQHPSETDERLMVRLLAFALFADDRLEFGRGLSNDDEPDLWRRDYTGDPDL WIDLGQPDESRVRKACNRSREVVVIGYGGQATETWWKKHANALGRHRNLRVLELESQATEALGALIQRGMRFDVIIQDGE VQMLADQGTVTLTPIVRQAPAE >Mature_181_residues ALTATVRRAELQISDMDRGYYANHSLTLAQHPSETDERLMVRLLAFALFADDRLEFGRGLSNDDEPDLWRRDYTGDPDLW IDLGQPDESRVRKACNRSREVVVIGYGGQATETWWKKHANALGRHRNLRVLELESQATEALGALIQRGMRFDVIIQDGEV QMLADQGTVTLTPIVRQAPAE
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=181, Percent_Identity=40.3314917127072, Blast_Score=154, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20620; Mature: 20489
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTATVRRAELQISDMDRGYYANHSLTLAQHPSETDERLMVRLLAFALFADDRLEFGRG CCCCCCEEEEEEEEECCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHCCC LSNDDEPDLWRRDYTGDPDLWIDLGQPDESRVRKACNRSREVVVIGYGGQATETWWKKHA CCCCCCCCCHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH NALGRHRNLRVLELESQATEALGALIQRGMRFDVIIQDGEVQMLADQGTVTLTPIVRQAP HHHHCCCCEEEEEECHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCEEEEHHHHCCC AE CC >Mature Secondary Structure ALTATVRRAELQISDMDRGYYANHSLTLAQHPSETDERLMVRLLAFALFADDRLEFGRG CCCCCEEEEEEEEECCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHCCC LSNDDEPDLWRRDYTGDPDLWIDLGQPDESRVRKACNRSREVVVIGYGGQATETWWKKHA CCCCCCCCCHHCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH NALGRHRNLRVLELESQATEALGALIQRGMRFDVIIQDGEVQMLADQGTVTLTPIVRQAP HHHHCCCCEEEEEECHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCCEEEEHHHHCCC AE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]