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The map label for this gene is trg [H]

Identifier: 66768122

GI number: 66768122

Start: 2189537

End: 2191195

Strand: Direct

Name: trg [H]

Synonym: XC_1801

Alternate gene names: 66768122

Gene position: 2189537-2191195 (Clockwise)

Preceding gene: 66768120

Following gene: 66768123

Centisome position: 42.53

GC content: 64.01

Gene sequence:

>1659_bases
ATGTTAGGCAACCTCAAAATCGGAACCCGGCTGATCGTGGCGTTTCTGATCGTTTCGGCGATCGGCGCTTGCATTGGCTG
GGTGGGGTACTCCAACTCCGGCCGGCTCAATGACCTGTCCACCACGTTGTACGAGCGCGAATTGCTGGGCTTGTCCAACG
TGAAGGAAGCCAACATCAATCTGATCTACGCCGGCCGTGCACGCGCAAACCTGCTGCTGGCCAGCAGCGCGGAAGAGCGC
CAGTCGCACGTGCAGAACATCGACAAGTACACCGCAAAAGTGGTCGATTACATGACACGTGCGCGGGCCAGCTTCGAAAC
CGACGAGGGCAAGACCAAGCTGGCGCAGTTTGATCGCGCCTGGCAGAAATACCTGGATGAGCGCGGCCGCTTCATCGAGG
CCGCCAACCGCGAAGCACTGCGCGAGGCCAACCCCGAATTGGCCGAGCTGTCACGCGCGGTGCGCGCCAGCTCGGATGAG
GTCGATACCTTGATGACCGACCTGAGCAGCTTGCGCGAACGCAGCGCGGCGTCGGCGAACGCCGAAACCGGTGCAATCCA
CAGCAGCAGTTCCAAATTGCTGATGGCCATTATCTGCGGTGGCGTGCTGTTGGGCGGGGTGCTCGGTGTCGTGATCAGCC
GCAGCGTCACCGGCCCGATCCGCCGTGCGGTGGAAGTGGCAAACGGGCTGTCCGAAGGCGATTTGACCATGCGCATCGAG
GTGCATGGTCGCGACGAAGCCGCGCAGCTGCTCGAGGCGATGCGCACCATGGTGCAGAAGCTGTCGCAGGTGGTAGGCGA
GGTCAACACCAGTGCCGAAACCCTGGCCAGCGCCTCGGAAGAAGTCAGTGCCACTGCGCAGAGCATTTCGCAGGCTGCCA
GCGAGCAAGCGGCTGGCGTGGAAGAAACCAGCGCCTCGCTGGAGCAGATGACCGCATCGATCAGCCAGAACACCGAAAAC
GCACGCATCACCGACGGCATGGCCACCCAGGCCGCGAAGGAGACCATTGAAGGTGGCGAGGCGGTCGTGGCCACCACGCA
GGCGATGAAGCAGATCGCACAGAAGATCGGCATCATCGACGACATCGCATATCAGACCAATCTGCTGGCACTCAATGCTG
CCATCGAAGCTGCACGCGCCGGCGAGCACGGCAAGGGCTTTGCGGTGGTTGCTGCCGAAGTGCGCAAGCTGGCCGAACGC
AGCCAGGTGGCGGCGCAGGAAATTGGTGAGGTCGCCAGTTCCAGCGTCGAGCTCGCCGACCGCGCCGGCCGCTTGCTGGA
CACCATCGTGCCCAGCATCAAGCGCACCTCCGATCTGGTACAGGAAATTTCTGCCGCCTCTGAAGAACAGTCCTCCGGCG
TCAGCCAGATCAACTCGGCGGTAGTGCAGTTGAGCCAGACCACCCAGCAGAATGCCAGCGCCTCCGAAGAACTCGCGGCC
ACCGCTGAAGAGATGAGCGCGCAGGCCGAGCAGCTGCAGCAGAGCATGGCGTTCTTCCGGCTAGGCGGGCAGGCGCCGGC
CAGTACGCCGCCCAAGCGCGGCAAGGCCGTGGCCGCGCGCGCAACCCGCAGCAGTGGCGCACGGACCTGGCGCGGCACTG
CCGCACCGGCCTACGCCATGTCCGAGGGCCCGGACGAGGGCCAGTTCGCACGATTCTGA

Upstream 100 bases:

>100_bases
ACGATTGGTTTAGCAAGGCACATCAATCGCTGCCCCGATGGTGTCAGCAAGTGCCTGCCGACGCACCGCACTCATGCACG
TTCACTCAAGAGACATCCCA

Downstream 100 bases:

>100_bases
GGACGACCGATGGATGCGTTGACACCCGATGCGCTGCTGGGCGATGCCGATGCGGCAGCCCAGTATCTGACCTTCCAGCT
GGACGGCGAGACCTTTGCCA

Product: chemotaxis protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MLGNLKIGTRLIVAFLIVSAIGACIGWVGYSNSGRLNDLSTTLYERELLGLSNVKEANINLIYAGRARANLLLASSAEER
QSHVQNIDKYTAKVVDYMTRARASFETDEGKTKLAQFDRAWQKYLDERGRFIEAANREALREANPELAELSRAVRASSDE
VDTLMTDLSSLRERSAASANAETGAIHSSSSKLLMAIICGGVLLGGVLGVVISRSVTGPIRRAVEVANGLSEGDLTMRIE
VHGRDEAAQLLEAMRTMVQKLSQVVGEVNTSAETLASASEEVSATAQSISQAASEQAAGVEETSASLEQMTASISQNTEN
ARITDGMATQAAKETIEGGEAVVATTQAMKQIAQKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAER
SQVAAQEIGEVASSSVELADRAGRLLDTIVPSIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQTTQQNASASEELAA
TAEEMSAQAEQLQQSMAFFRLGGQAPASTPPKRGKAVAARATRSSGARTWRGTAAPAYAMSEGPDEGQFARF

Sequences:

>Translated_552_residues
MLGNLKIGTRLIVAFLIVSAIGACIGWVGYSNSGRLNDLSTTLYERELLGLSNVKEANINLIYAGRARANLLLASSAEER
QSHVQNIDKYTAKVVDYMTRARASFETDEGKTKLAQFDRAWQKYLDERGRFIEAANREALREANPELAELSRAVRASSDE
VDTLMTDLSSLRERSAASANAETGAIHSSSSKLLMAIICGGVLLGGVLGVVISRSVTGPIRRAVEVANGLSEGDLTMRIE
VHGRDEAAQLLEAMRTMVQKLSQVVGEVNTSAETLASASEEVSATAQSISQAASEQAAGVEETSASLEQMTASISQNTEN
ARITDGMATQAAKETIEGGEAVVATTQAMKQIAQKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAER
SQVAAQEIGEVASSSVELADRAGRLLDTIVPSIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQTTQQNASASEELAA
TAEEMSAQAEQLQQSMAFFRLGGQAPASTPPKRGKAVAARATRSSGARTWRGTAAPAYAMSEGPDEGQFARF
>Mature_552_residues
MLGNLKIGTRLIVAFLIVSAIGACIGWVGYSNSGRLNDLSTTLYERELLGLSNVKEANINLIYAGRARANLLLASSAEER
QSHVQNIDKYTAKVVDYMTRARASFETDEGKTKLAQFDRAWQKYLDERGRFIEAANREALREANPELAELSRAVRASSDE
VDTLMTDLSSLRERSAASANAETGAIHSSSSKLLMAIICGGVLLGGVLGVVISRSVTGPIRRAVEVANGLSEGDLTMRIE
VHGRDEAAQLLEAMRTMVQKLSQVVGEVNTSAETLASASEEVSATAQSISQAASEQAAGVEETSASLEQMTASISQNTEN
ARITDGMATQAAKETIEGGEAVVATTQAMKQIAQKIGIIDDIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAER
SQVAAQEIGEVASSSVELADRAGRLLDTIVPSIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQTTQQNASASEELAA
TAEEMSAQAEQLQQSMAFFRLGGQAPASTPPKRGKAVAARATRSSGARTWRGTAAPAYAMSEGPDEGQFARF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=340, Percent_Identity=38.5294117647059, Blast_Score=212, Evalue=5e-56,
Organism=Escherichia coli, GI2367378, Length=330, Percent_Identity=40.6060606060606, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI1788194, Length=528, Percent_Identity=32.1969696969697, Blast_Score=192, Evalue=4e-50,
Organism=Escherichia coli, GI1788195, Length=315, Percent_Identity=37.7777777777778, Blast_Score=183, Evalue=3e-47,
Organism=Escherichia coli, GI1789453, Length=297, Percent_Identity=36.3636363636364, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58402; Mature: 58402

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGNLKIGTRLIVAFLIVSAIGACIGWVGYSNSGRLNDLSTTLYERELLGLSNVKEANIN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE
LIYAGRARANLLLASSAEERQSHVQNIDKYTAKVVDYMTRARASFETDEGKTKLAQFDRA
EEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
WQKYLDERGRFIEAANREALREANPELAELSRAVRASSDEVDTLMTDLSSLRERSAASAN
HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
AETGAIHSSSSKLLMAIICGGVLLGGVLGVVISRSVTGPIRRAVEVANGLSEGDLTMRIE
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEE
VHGRDEAAQLLEAMRTMVQKLSQVVGEVNTSAETLASASEEVSATAQSISQAASEQAAGV
ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EETSASLEQMTASISQNTENARITDGMATQAAKETIEGGEAVVATTQAMKQIAQKIGIID
HHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHH
DIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGEVASSSVELAD
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGRLLDTIVPSIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQTTQQNASASEELAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
TAEEMSAQAEQLQQSMAFFRLGGQAPASTPPKRGKAVAARATRSSGARTWRGTAAPAYAM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
SEGPDEGQFARF
CCCCCCCCCCCC
>Mature Secondary Structure
MLGNLKIGTRLIVAFLIVSAIGACIGWVGYSNSGRLNDLSTTLYERELLGLSNVKEANIN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE
LIYAGRARANLLLASSAEERQSHVQNIDKYTAKVVDYMTRARASFETDEGKTKLAQFDRA
EEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
WQKYLDERGRFIEAANREALREANPELAELSRAVRASSDEVDTLMTDLSSLRERSAASAN
HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
AETGAIHSSSSKLLMAIICGGVLLGGVLGVVISRSVTGPIRRAVEVANGLSEGDLTMRIE
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEE
VHGRDEAAQLLEAMRTMVQKLSQVVGEVNTSAETLASASEEVSATAQSISQAASEQAAGV
ECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EETSASLEQMTASISQNTENARITDGMATQAAKETIEGGEAVVATTQAMKQIAQKIGIID
HHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHH
DIAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGEVASSSVELAD
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAGRLLDTIVPSIKRTSDLVQEISAASEEQSSGVSQINSAVVQLSQTTQQNASASEELAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
TAEEMSAQAEQLQQSMAFFRLGGQAPASTPPKRGKAVAARATRSSGARTWRGTAAPAYAM
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
SEGPDEGQFARF
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]