| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is cheW [H]
Identifier: 66768123
GI number: 66768123
Start: 2191205
End: 2191714
Strand: Direct
Name: cheW [H]
Synonym: XC_1802
Alternate gene names: 66768123
Gene position: 2191205-2191714 (Clockwise)
Preceding gene: 66768122
Following gene: 66768125
Centisome position: 42.56
GC content: 65.88
Gene sequence:
>510_bases ATGGATGCGTTGACACCCGATGCGCTGCTGGGCGATGCCGATGCGGCAGCCCAGTATCTGACCTTCCAGCTGGACGGCGA GACCTTTGCCACCAGCATTCTCGGCATTCGCGAGATCATCCAGTACCGTGCACCCACGCCGGTGCCATCGATGCCGGCCT GCGTACGCGGGGTGATCAACCTGCGCGGCGCAGTGGTGCCGGTGGTGGATCTGCAGGCACGGCTGGGACGTGCCGACAGC AGCATCGGCAAGCGCAGTTGCATCGTGATTCTGGCCACCGAGCAGGCGCAGGGGCCGCAGGTGATCGGCGTGCTGGTGGA CGCGGTCAATGCGGTGATCGAGCTGGCCGATCACGACATCGAAGCAGCGCCGTCGTTCGGCACGCACATCCGCCGCGATC TGCTGCGCGGCATGGGCAAGGTGGGCGAGCGCTTCGTCGTGCTGCTGGAGATGGAGCAGGTGTTGCGAGTGGACGAGATT GCTGGCGAAACCGACGTGCTGGCGGCCTGA
Upstream 100 bases:
>100_bases CAGCAGTGGCGCACGGACCTGGCGCGGCACTGCCGCACCGGCCTACGCCATGTCCGAGGGCCCGGACGAGGGCCAGTTCG CACGATTCTGAGGACGACCG
Downstream 100 bases:
>100_bases AATCCGCGAAACGAAGCGCCTGCGGCGGTGGCGCGTTGATCAGCGGTCGGTCTGCCAACCATCGAAGCGCTGGACGCAAT TGCGCCCCGCACGCGCGGCA
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MDALTPDALLGDADAAAQYLTFQLDGETFATSILGIREIIQYRAPTPVPSMPACVRGVINLRGAVVPVVDLQARLGRADS SIGKRSCIVILATEQAQGPQVIGVLVDAVNAVIELADHDIEAAPSFGTHIRRDLLRGMGKVGERFVVLLEMEQVLRVDEI AGETDVLAA
Sequences:
>Translated_169_residues MDALTPDALLGDADAAAQYLTFQLDGETFATSILGIREIIQYRAPTPVPSMPACVRGVINLRGAVVPVVDLQARLGRADS SIGKRSCIVILATEQAQGPQVIGVLVDAVNAVIELADHDIEAAPSFGTHIRRDLLRGMGKVGERFVVLLEMEQVLRVDEI AGETDVLAA >Mature_169_residues MDALTPDALLGDADAAAQYLTFQLDGETFATSILGIREIIQYRAPTPVPSMPACVRGVINLRGAVVPVVDLQARLGRADS SIGKRSCIVILATEQAQGPQVIGVLVDAVNAVIELADHDIEAAPSFGTHIRRDLLRGMGKVGERFVVLLEMEQVLRVDEI AGETDVLAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=161, Percent_Identity=31.055900621118, Blast_Score=99, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 17972; Mature: 17972
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALTPDALLGDADAAAQYLTFQLDGETFATSILGIREIIQYRAPTPVPSMPACVRGVIN CCCCCCCHHHCCHHHHHEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LRGAVVPVVDLQARLGRADSSIGKRSCIVILATEQAQGPQVIGVLVDAVNAVIELADHDI HCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC EAAPSFGTHIRRDLLRGMGKVGERFVVLLEMEQVLRVDEIAGETDVLAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDALTPDALLGDADAAAQYLTFQLDGETFATSILGIREIIQYRAPTPVPSMPACVRGVIN CCCCCCCHHHCCHHHHHEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LRGAVVPVVDLQARLGRADSSIGKRSCIVILATEQAQGPQVIGVLVDAVNAVIELADHDI HCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC EAAPSFGTHIRRDLLRGMGKVGERFVVLLEMEQVLRVDEIAGETDVLAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]