| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is ybeZ [H]
Identifier: 66768108
GI number: 66768108
Start: 2172855
End: 2173841
Strand: Reverse
Name: ybeZ [H]
Synonym: XC_1787
Alternate gene names: 66768108
Gene position: 2173841-2172855 (Counterclockwise)
Preceding gene: 66768109
Following gene: 77761167
Centisome position: 42.22
GC content: 65.25
Gene sequence:
>987_bases ATGAACTCACCAGCGTCCCGCGACTTCACCCTCGACCCGGCCGACACCGAGCGCCTGGCCAACCTGGCCGGTCCGTTCGA TGCGCACCTGCGCCAGATCGAGCTCAAGCTTGGCGTGGAGATCGCCAACCGCGGCAACATCTTCCGCGTCACCGGCCCGG AGCCTGCGGTCGATGCCGCGCAGCATCTGCTGACCGCGCTATATGACGAAGCCGCCTCCACCACGTTCGACAACCACGCC ATCCATCTGCGGCTCAACGATGCCAATGTCGAGCAGGTGGCGCAGCGCGCGTACGAACCACAGGACGTGGCGATCAAGGT CAAACGCGGCACCGTGCGTGGCCGCGGCGCCAACCAGGCCAAGTACCTGCACGCGATCACCACCCACGACATCAATTTCG GTATCGGCCCGGCCGGCACCGGCAAGACCTTCCTGGCCGTGGCCAGCGCCGTGGAGGCACTGAACGAGTCGCGCGTGCAG CGGCTGATCCTGGTGCGCCCGGCGGTGGAGGCTGGCGAGAAGCTGGGCTTTCTGCCCGGCGATCTCAGCCAGAAGGTCGA CCCTTATCTGCGTCCGCTGTACGACGCGCTGTATGAAATGCTGGGCGTGGAAAAGGTGGTCAAGCTGCTGGAAAAGAACG TCATCGAGATCGCTCCGCTGGCCTACATGCGCGGGCGCACCCTCAACGACGCGTACGTGATCCTGGACGAGGCGCAGAAC ACCACCATCGAACAGATGAAGATGTTCCTGACCCGCCTGGGCTTCGGTTCCACCGCGGTGGTCACCGGCGATCTCACCCA GATCGACCTGCCCAAGCACGTCAAGTCCGGGCTGCGCGATGCCATCGACGTGCTGCGCGAGGTGGACGGGGTGAGCTTCA CCTTCTTCGAAGCCCGCGACGTCGTGCGCCATCCGCTGGTACAACGCATCGTCACGGCGTACGAAAAGCACGATCTCGCC CACACGCCGGCCGAACCCGCGGCCTGA
Upstream 100 bases:
>100_bases CGCGGTGCTGCGCCGCCCGGTTTGCTGGTGGGATCACGCCCCCCGCGCTACCCTTTTGCTCCCGTCCTACCGACGCCGCA TTGCGGTGTCCGATCCAATC
Downstream 100 bases:
>100_bases AATCACGCCGATGCAGGCACCGCCAGGTGTCCTGCGCCCAGGTGGTGCGTCGCAATGTCGGCGTGGCGCAGGCATCTGCG CAACCCTAGCCATGCGACGT
Product: ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNSPASRDFTLDPADTERLANLAGPFDAHLRQIELKLGVEIANRGNIFRVTGPEPAVDAAQHLLTALYDEAASTTFDNHA IHLRLNDANVEQVAQRAYEPQDVAIKVKRGTVRGRGANQAKYLHAITTHDINFGIGPAGTGKTFLAVASAVEALNESRVQ RLILVRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALYEMLGVEKVVKLLEKNVIEIAPLAYMRGRTLNDAYVILDEAQN TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIDVLREVDGVSFTFFEARDVVRHPLVQRIVTAYEKHDLA HTPAEPAA
Sequences:
>Translated_328_residues MNSPASRDFTLDPADTERLANLAGPFDAHLRQIELKLGVEIANRGNIFRVTGPEPAVDAAQHLLTALYDEAASTTFDNHA IHLRLNDANVEQVAQRAYEPQDVAIKVKRGTVRGRGANQAKYLHAITTHDINFGIGPAGTGKTFLAVASAVEALNESRVQ RLILVRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALYEMLGVEKVVKLLEKNVIEIAPLAYMRGRTLNDAYVILDEAQN TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIDVLREVDGVSFTFFEARDVVRHPLVQRIVTAYEKHDLA HTPAEPAA >Mature_328_residues MNSPASRDFTLDPADTERLANLAGPFDAHLRQIELKLGVEIANRGNIFRVTGPEPAVDAAQHLLTALYDEAASTTFDNHA IHLRLNDANVEQVAQRAYEPQDVAIKVKRGTVRGRGANQAKYLHAITTHDINFGIGPAGTGKTFLAVASAVEALNESRVQ RLILVRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALYEMLGVEKVVKLLEKNVIEIAPLAYMRGRTLNDAYVILDEAQN TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIDVLREVDGVSFTFFEARDVVRHPLVQRIVTAYEKHDLA HTPAEPAA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=323, Percent_Identity=60.3715170278638, Blast_Score=372, Evalue=1e-104, Organism=Escherichia coli, GI1787257, Length=202, Percent_Identity=49.5049504950495, Blast_Score=194, Evalue=7e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 36037; Mature: 36037
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPASRDFTLDPADTERLANLAGPFDAHLRQIELKLGVEIANRGNIFRVTGPEPAVDAA CCCCCCCCCEECCCCHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCEEEECCCCCHHHHH QHLLTALYDEAASTTFDNHAIHLRLNDANVEQVAQRAYEPQDVAIKVKRGTVRGRGANQA HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH KYLHAITTHDINFGIGPAGTGKTFLAVASAVEALNESRVQRLILVRPAVEAGEKLGFLPG HEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCC DLSQKVDPYLRPLYDALYEMLGVEKVVKLLEKNVIEIAPLAYMRGRTLNDAYVILDEAQN CHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCC TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIDVLREVDGVSFTFFEARD CHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH VVRHPLVQRIVTAYEKHDLAHTPAEPAA HHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNSPASRDFTLDPADTERLANLAGPFDAHLRQIELKLGVEIANRGNIFRVTGPEPAVDAA CCCCCCCCCEECCCCHHHHHHHCCCHHHHHHHHHHHCCEEEECCCCEEEECCCCCHHHHH QHLLTALYDEAASTTFDNHAIHLRLNDANVEQVAQRAYEPQDVAIKVKRGTVRGRGANQA HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCH KYLHAITTHDINFGIGPAGTGKTFLAVASAVEALNESRVQRLILVRPAVEAGEKLGFLPG HEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCC DLSQKVDPYLRPLYDALYEMLGVEKVVKLLEKNVIEIAPLAYMRGRTLNDAYVILDEAQN CHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCC TTIEQMKMFLTRLGFGSTAVVTGDLTQIDLPKHVKSGLRDAIDVLREVDGVSFTFFEARD CHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH VVRHPLVQRIVTAYEKHDLAHTPAEPAA HHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]