| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66768086
Identifier: 66768086
GI number: 66768086
Start: 2146326
End: 2146787
Strand: Reverse
Name: 66768086
Synonym: XC_1765
Alternate gene names: NA
Gene position: 2146787-2146326 (Counterclockwise)
Preceding gene: 66768087
Following gene: 66768080
Centisome position: 41.7
GC content: 61.04
Gene sequence:
>462_bases ATGGCACTGCTGATCTGGCAGGACGACCTCAACACCGGGATCGAGGTGATCGATCACCAACACCGCCGCATCGTGGAGAT GATCAATCACCTGCACGTGGCGCAGACCAGCCTGCAGCGGTTGGTGGTGTCGGACGTGATCGACGAATTGATCGACTACA CGTTGTCGCATTTCGCCTTCGAAGAGGAGCTGATGGAAGAAGCCGGCTACCCCTTCAGCCACGCCCACCAGCGCGTGCAC GCGGTGTTCGCCAAGCGCGTTGGCGACTATCGCCTGCGTTTCCAGGCGGGCGAAGATATCAGCGACGAACTCCGCAACAT GCTCTCGCGCTGGTTGTTCAACCACATCCGCGGCGACGATCAGGCCTATGCCCCGCAGGTGATCGCGCACCTGGACCAAT TCAGCCGCACCCATCAACACGGCAGCTGGCTGGGACGGACGCTCAAGCGCTTGTTTCGCTGA
Upstream 100 bases:
>100_bases CGCCTGGCCAGCTGAGCCGCAGCGCTGGCTTGATCCAGATCAACGCGCATGGCGCGCGTGATGCCTATCGTGCGCCCATC GCATGGGGCAAGGCATATCG
Downstream 100 bases:
>100_bases TGCATTGGGTGGCTGAGCCCGCTTAGGAGCTGCGCTTGCGCGCGACTGGGCGTATCGGTAATGCCGCATCGCGCGCAAGC GCGCTCCTACGGGTGTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MALLIWQDDLNTGIEVIDHQHRRIVEMINHLHVAQTSLQRLVVSDVIDELIDYTLSHFAFEEELMEEAGYPFSHAHQRVH AVFAKRVGDYRLRFQAGEDISDELRNMLSRWLFNHIRGDDQAYAPQVIAHLDQFSRTHQHGSWLGRTLKRLFR
Sequences:
>Translated_153_residues MALLIWQDDLNTGIEVIDHQHRRIVEMINHLHVAQTSLQRLVVSDVIDELIDYTLSHFAFEEELMEEAGYPFSHAHQRVH AVFAKRVGDYRLRFQAGEDISDELRNMLSRWLFNHIRGDDQAYAPQVIAHLDQFSRTHQHGSWLGRTLKRLFR >Mature_152_residues ALLIWQDDLNTGIEVIDHQHRRIVEMINHLHVAQTSLQRLVVSDVIDELIDYTLSHFAFEEELMEEAGYPFSHAHQRVHA VFAKRVGDYRLRFQAGEDISDELRNMLSRWLFNHIRGDDQAYAPQVIAHLDQFSRTHQHGSWLGRTLKRLFR
Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]
COG id: COG2703
COG function: function code P; Hemerythrin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemerythrin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012827 - InterPro: IPR012312 - InterPro: IPR016131 [H]
Pfam domain/function: PF01814 Hemerythrin [H]
EC number: NA
Molecular weight: Translated: 18055; Mature: 17923
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00550 HEMERYTHRINS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLIWQDDLNTGIEVIDHQHRRIVEMINHLHVAQTSLQRLVVSDVIDELIDYTLSHFAF CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEELMEEAGYPFSHAHQRVHAVFAKRVGDYRLRFQAGEDISDELRNMLSRWLFNHIRGDD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCC QAYAPQVIAHLDQFSRTHQHGSWLGRTLKRLFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure ALLIWQDDLNTGIEVIDHQHRRIVEMINHLHVAQTSLQRLVVSDVIDELIDYTLSHFAF EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEELMEEAGYPFSHAHQRVHAVFAKRVGDYRLRFQAGEDISDELRNMLSRWLFNHIRGDD HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCC QAYAPQVIAHLDQFSRTHQHGSWLGRTLKRLFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA