| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is ygjG [C]
Identifier: 66768080
GI number: 66768080
Start: 2137217
End: 2138569
Strand: Reverse
Name: ygjG [C]
Synonym: XC_1759
Alternate gene names: 66768080
Gene position: 2138569-2137217 (Counterclockwise)
Preceding gene: 66768086
Following gene: 66768079
Centisome position: 41.54
GC content: 68.37
Gene sequence:
>1353_bases ATGCACGACCACCCTTCGAGCGATGCCGCCCACGCGATGCAGACACCGGCGGCGATGGAGGCGTTCTGGATGCCGTTCAC GGCCAACCGGCAGTTCAAGGCGCGCCCGCGCCTGCTGGCCTCGGCTGCAGGCATGTATTACCGCGATGTCGAGGGCCGGC AGATCCTGGATGGCACCGCGGGGCTGTGGTGCTGCAACGCCGGCCATGCGCGCGAGCGCATCGTCGCGGCGATCCGCGCG CAGGCCGGCACGCTGGATTTCGCGCCCACCTTCCAGATGGGCTCACCGCTGCCGTTCGCCCTGGCCGAACGGCTGGCCGC GTTGGCGCCGCCAGGCCTGGGCCATGTGTTCTTCACCAACTCCGGCTCGGAAGCCGTGGATAGCGCGATGAAGATCGTGC TGGCCTATCACCGCTTGCGCGGCGAGGGCCAGCGCACCCGTTTCATCGGCCGCGAGAAGGCCTACCACGGGGTGGGCTTC GGCGGGATGTCGATCGGCGGGCTGCCCAATAACCGTAAATGGTTCGGCCCGCTGCTGGCCGGCACCGATCATCTACGGCA CACGCTGGATCTGCAGCGCAATGCGTATTCGCGGGGACTGCCCGCCTTCGGTGTGGAGCTAGCCGACGACCTGGAACGGC TGATCACCCTGCACGACGCCTCCACCATCGCCGCAGTGTTCGTCGAACCGGTGTCCGGCTCGGCCGGGGTGATCCTGCCG CCGGAGGGCTATCTGCAGCGCCTGCGCGCCATCTGCGACCGCCACGGCATCGTGCTGGTGTTCGACGAGGTGATCACCGG CTTCGGGCGCGTGGGCGAGGCGTTCGCCGCGCAGCGCTTCGGGGTGACCCCGGACCTGATCACCGCCGCCAAGGGCCTGA CCAGCGGCACGGTGCCGATGGGCGCGGTGCTGGTGGCCGATGCGATCCACGATGCCTTCATGCATGGGCCGCAGGCGGCG ATCGAGCTGTTCCATGGCTACACCTATTCCGGACATCCGCTGGCCTGCGCCGCAGCCCTGGCCACGCTGGACACCTACGC CGAAGAACAGCTGTTCACGCGGGCAATTACGCTGGGGCCGCAGTGGGAGGAGGCGTTGCACAGCCTGCGCGGACTGCCGC ACGTCATCGACATCCGCAACATCGGCTTGATCGGTGCGATCGAACTGGCGCCGCGCGAGGGTGCCCCGGGGGCGCGCGGT TACGAGGTGTTCGAACGCTGCTTCCACGAGGGCGGCCTGCTGGTGCGTGTCACCGGCGATGTCATTGCGTTGTCGCCGCC GTTGATCGTCACCCCCGACCAGATCGGACAAATGGTGGAGACGCTGGCCGCGATCCTGCGCAAGGTGGACTAA
Upstream 100 bases:
>100_bases GGCCGCCACGCGGCCCGGGTGCGCCAGGTGCGCGCCGCTGCGGTTCCAGATGACGCAGCTGCTGCCGTAGAGTCGGCCCA TCCCCGCCCCGGAGTCTGCG
Downstream 100 bases:
>100_bases AGGCCTTGCAGTGCGAGCGGCCGCTCGCATTGGCGTGCCGACGCGCTGGCTGGCCAGTGTGTCACCGGGCCGCGCCATGG CCGGCTGCCCTGCCCGCCAC
Product: beta alanine--pyruvate transaminase
Products: NA
Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MHDHPSSDAAHAMQTPAAMEAFWMPFTANRQFKARPRLLASAAGMYYRDVEGRQILDGTAGLWCCNAGHARERIVAAIRA QAGTLDFAPTFQMGSPLPFALAERLAALAPPGLGHVFFTNSGSEAVDSAMKIVLAYHRLRGEGQRTRFIGREKAYHGVGF GGMSIGGLPNNRKWFGPLLAGTDHLRHTLDLQRNAYSRGLPAFGVELADDLERLITLHDASTIAAVFVEPVSGSAGVILP PEGYLQRLRAICDRHGIVLVFDEVITGFGRVGEAFAAQRFGVTPDLITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQAA IELFHGYTYSGHPLACAAALATLDTYAEEQLFTRAITLGPQWEEALHSLRGLPHVIDIRNIGLIGAIELAPREGAPGARG YEVFERCFHEGGLLVRVTGDVIALSPPLIVTPDQIGQMVETLAAILRKVD
Sequences:
>Translated_450_residues MHDHPSSDAAHAMQTPAAMEAFWMPFTANRQFKARPRLLASAAGMYYRDVEGRQILDGTAGLWCCNAGHARERIVAAIRA QAGTLDFAPTFQMGSPLPFALAERLAALAPPGLGHVFFTNSGSEAVDSAMKIVLAYHRLRGEGQRTRFIGREKAYHGVGF GGMSIGGLPNNRKWFGPLLAGTDHLRHTLDLQRNAYSRGLPAFGVELADDLERLITLHDASTIAAVFVEPVSGSAGVILP PEGYLQRLRAICDRHGIVLVFDEVITGFGRVGEAFAAQRFGVTPDLITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQAA IELFHGYTYSGHPLACAAALATLDTYAEEQLFTRAITLGPQWEEALHSLRGLPHVIDIRNIGLIGAIELAPREGAPGARG YEVFERCFHEGGLLVRVTGDVIALSPPLIVTPDQIGQMVETLAAILRKVD >Mature_450_residues MHDHPSSDAAHAMQTPAAMEAFWMPFTANRQFKARPRLLASAAGMYYRDVEGRQILDGTAGLWCCNAGHARERIVAAIRA QAGTLDFAPTFQMGSPLPFALAERLAALAPPGLGHVFFTNSGSEAVDSAMKIVLAYHRLRGEGQRTRFIGREKAYHGVGF GGMSIGGLPNNRKWFGPLLAGTDHLRHTLDLQRNAYSRGLPAFGVELADDLERLITLHDASTIAAVFVEPVSGSAGVILP PEGYLQRLRAICDRHGIVLVFDEVITGFGRVGEAFAAQRFGVTPDLITAAKGLTSGTVPMGAVLVADAIHDAFMHGPQAA IELFHGYTYSGHPLACAAALATLDTYAEEQLFTRAITLGPQWEEALHSLRGLPHVIDIRNIGLIGAIELAPREGAPGARG YEVFERCFHEGGLLVRVTGDVIALSPPLIVTPDQIGQMVETLAAILRKVD
Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=412, Percent_Identity=29.126213592233, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI284507298, Length=328, Percent_Identity=29.8780487804878, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI37574042, Length=428, Percent_Identity=29.4392523364486, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI13994255, Length=438, Percent_Identity=27.6255707762557, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI226442705, Length=428, Percent_Identity=29.4392523364486, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI24119277, Length=435, Percent_Identity=26.2068965517241, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI226442709, Length=392, Percent_Identity=29.8469387755102, Blast_Score=123, Evalue=3e-28, Organism=Escherichia coli, GI145693181, Length=391, Percent_Identity=32.7365728900256, Blast_Score=190, Evalue=1e-49, Organism=Escherichia coli, GI1786991, Length=434, Percent_Identity=31.1059907834101, Blast_Score=164, Evalue=9e-42, Organism=Escherichia coli, GI1789759, Length=449, Percent_Identity=30.2895322939866, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1789016, Length=408, Percent_Identity=32.1078431372549, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI1788044, Length=439, Percent_Identity=28.7015945330296, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI1787560, Length=424, Percent_Identity=31.3679245283019, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1786349, Length=361, Percent_Identity=30.4709141274238, Blast_Score=95, Evalue=9e-21, Organism=Caenorhabditis elegans, GI25144271, Length=419, Percent_Identity=27.4463007159904, Blast_Score=154, Evalue=9e-38, Organism=Caenorhabditis elegans, GI32564660, Length=439, Percent_Identity=27.5626423690205, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI71992977, Length=438, Percent_Identity=26.9406392694064, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI25144274, Length=248, Percent_Identity=31.4516129032258, Blast_Score=128, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6323470, Length=437, Percent_Identity=27.4599542334096, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6324386, Length=450, Percent_Identity=26.2222222222222, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6324432, Length=416, Percent_Identity=26.4423076923077, Blast_Score=116, Evalue=9e-27, Organism=Drosophila melanogaster, GI21357415, Length=420, Percent_Identity=27.6190476190476, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI161085790, Length=441, Percent_Identity=29.4784580498866, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI28574759, Length=437, Percent_Identity=29.7482837528604, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI21356575, Length=434, Percent_Identity=27.8801843317972, Blast_Score=115, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.18 [H]
Molecular weight: Translated: 48321; Mature: 48321
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDHPSSDAAHAMQTPAAMEAFWMPFTANRQFKARPRLLASAAGMYYRDVEGRQILDGTA CCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCEEECCCC GLWCCNAGHARERIVAAIRAQAGTLDFAPTFQMGSPLPFALAERLAALAPPGLGHVFFTN CEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEC SGSEAVDSAMKIVLAYHRLRGEGQRTRFIGREKAYHGVGFGGMSIGGLPNNRKWFGPLLA CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCEECCCCCCCCCCCHHHH GTDHLRHTLDLQRNAYSRGLPAFGVELADDLERLITLHDASTIAAVFVEPVSGSAGVILP CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEC PEGYLQRLRAICDRHGIVLVFDEVITGFGRVGEAFAAQRFGVTPDLITAAKGLTSGTVPM CHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCH GAVLVADAIHDAFMHGPQAAIELFHGYTYSGHPLACAAALATLDTYAEEQLFTRAITLGP HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QWEEALHSLRGLPHVIDIRNIGLIGAIELAPREGAPGARGYEVFERCFHEGGLLVRVTGD CHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECC VIALSPPLIVTPDQIGQMVETLAAILRKVD EEEECCCEEECHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHDHPSSDAAHAMQTPAAMEAFWMPFTANRQFKARPRLLASAAGMYYRDVEGRQILDGTA CCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCEEECCCC GLWCCNAGHARERIVAAIRAQAGTLDFAPTFQMGSPLPFALAERLAALAPPGLGHVFFTN CEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEC SGSEAVDSAMKIVLAYHRLRGEGQRTRFIGREKAYHGVGFGGMSIGGLPNNRKWFGPLLA CCHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCCCEECCCCCCCCCCCHHHH GTDHLRHTLDLQRNAYSRGLPAFGVELADDLERLITLHDASTIAAVFVEPVSGSAGVILP CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEEC PEGYLQRLRAICDRHGIVLVFDEVITGFGRVGEAFAAQRFGVTPDLITAAKGLTSGTVPM CHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCH GAVLVADAIHDAFMHGPQAAIELFHGYTYSGHPLACAAALATLDTYAEEQLFTRAITLGP HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QWEEALHSLRGLPHVIDIRNIGLIGAIELAPREGAPGARGYEVFERCFHEGGLLVRVTGD CHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECC VIALSPPLIVTPDQIGQMVETLAAILRKVD EEEECCCEEECHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1618757; 6822556; 2500426 [H]