| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yggX [C]
Identifier: 66768017
GI number: 66768017
Start: 2032661
End: 2032939
Strand: Reverse
Name: yggX [C]
Synonym: XC_1693
Alternate gene names: 66768017
Gene position: 2032939-2032661 (Counterclockwise)
Preceding gene: 66768018
Following gene: 66768013
Centisome position: 39.48
GC content: 62.37
Gene sequence:
>279_bases ATGTCCCGCACCGTGTTCTGCCAGTACCAGCAATGCGACACCGAAGGCCTGGATTTTGCGCCGTATCCGGGCGAGCTCGG CCAACGCATCTTCGCGCAGATTGGCAAGGCCGGCTGGCAGGCCTGGCTTGCGCACCAGACCATGCTGATCAACGAAAACC GGCTCTCGCCGCGTGACCCCAAGCACCGCGCCTTCCTCGAGGCGGAACTGCAGAAGTTCCTGTTCGAACGCAACGCCGAC AAGCCGGAAGGGTATGTCGATCCGCTGGGTGAAGAGTGA
Upstream 100 bases:
>100_bases GAACACGGGCTTACACTGCGACTCCAGCGCACCGTGTGTTGGTTGAGCCCTGCACACCTGCATCGCCCACATCACGCGCG CCCCATACAAGGAACTTTGC
Downstream 100 bases:
>100_bases GCACGGCAATGCGCTGATGTGGCTGCAGCGTGCGTCCGACCCGGTAGTGCCCACATGTTCGCGCTGAGGCGCTGTGGTGC ATCGCCACTGCCGCCGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MSRTVFCQYQQCDTEGLDFAPYPGELGQRIFAQIGKAGWQAWLAHQTMLINENRLSPRDPKHRAFLEAELQKFLFERNAD KPEGYVDPLGEE
Sequences:
>Translated_92_residues MSRTVFCQYQQCDTEGLDFAPYPGELGQRIFAQIGKAGWQAWLAHQTMLINENRLSPRDPKHRAFLEAELQKFLFERNAD KPEGYVDPLGEE >Mature_91_residues SRTVFCQYQQCDTEGLDFAPYPGELGQRIFAQIGKAGWQAWLAHQTMLINENRLSPRDPKHRAFLEAELQKFLFERNADK PEGYVDPLGEE
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family
Homologues:
Organism=Escherichia coli, GI1789332, Length=86, Percent_Identity=50, Blast_Score=93, Evalue=4e-21,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): FETP_XANC8 (Q4UW14)
Other databases:
- EMBL: CP000050 - RefSeq: YP_242779.1 - ProteinModelPortal: Q4UW14 - SMR: Q4UW14 - STRING: Q4UW14 - GeneID: 3380242 - GenomeReviews: CP000050_GR - KEGG: xcb:XC_1693 - eggNOG: COG2924 - HOGENOM: HBG289800 - OMA: SKQTMLI - PhylomeDB: Q4UW14 - ProtClustDB: PRK05408 - BioCyc: XCAM314565:XC_1693-MONOMER - HAMAP: MF_00686 - InterPro: IPR007457 - PIRSF: PIRSF029827 - ProDom: PD029191
Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX
EC number: NA
Molecular weight: Translated: 10645; Mature: 10514
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTVFCQYQQCDTEGLDFAPYPGELGQRIFAQIGKAGWQAWLAHQTMLINENRLSPRDP CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC KHRAFLEAELQKFLFERNADKPEGYVDPLGEE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SRTVFCQYQQCDTEGLDFAPYPGELGQRIFAQIGKAGWQAWLAHQTMLINENRLSPRDP CCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC KHRAFLEAELQKFLFERNADKPEGYVDPLGEE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA