| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yehV [C]
Identifier: 66767981
GI number: 66767981
Start: 1992755
End: 1993111
Strand: Direct
Name: yehV [C]
Synonym: XC_1657
Alternate gene names: 66767981
Gene position: 1992755-1993111 (Clockwise)
Preceding gene: 66767980
Following gene: 66767982
Centisome position: 38.7
GC content: 61.62
Gene sequence:
>357_bases ATGCTGGATCCGGGCAGTAATCGCGAGCTACCGCCGATTCCGGCCAAGCGCTACTTCACCATCGGTGAGGTGAGCGAGCT GTGCGACGTCAAGCCGCACGTGCTGCGCTATTGGGAAACCGAATTTCCGAGCCTGGAGCCAGTCAAGCGGCGCGGCAACC GACGCTACTACCAGCGGCACGATGTGCTGATGGTGCGGCAGATTCGTGGCCTGCTGTACGAGCAGGGTTACACCATCGGG GGCGCGCGTCTGCGTCTTGAAGGGGATGGGGCCAAGAGCGAGTCAGCGCTGAGCAATCAGATCATCAAGCAGGTGCGCAT GGAGCTTGAAGAAGTCCTGCAGCTGCTGCGACGCTAG
Upstream 100 bases:
>100_bases CCCGGTCGCAATCCCAAGACCGGTGAGGAAATTCCGATCTCGGCCAGGACGGTGGTGACCTTCCGCCCCGGCCAGAAACT CAAGGAACGGGTGGAGGCTT
Downstream 100 bases:
>100_bases GAAAGCGCCGCATAAAGCCGCTATAATCGCAGGCCGCCTCAGGGCGGGACGCAACATCTTCGGGGTATAGCGCAGCCTGG TAGCGCACTAGTCTGGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; Transcriptional Regulator Protein; MerR Family Regulatory Protein; Transcriptional Regulator MerR; TRANSCRIPTIONal REGULATOR MerR Family; Transcriptional Regulatory Protein; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein; MerR Protein
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG GARLRLEGDGAKSESALSNQIIKQVRMELEEVLQLLRR
Sequences:
>Translated_118_residues MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG GARLRLEGDGAKSESALSNQIIKQVRMELEEVLQLLRR >Mature_118_residues MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG GARLRLEGDGAKSESALSNQIIKQVRMELEEVLQLLRR
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13826; Mature: 13826
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRH CCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCHHHHH DVLMVRQIRGLLYEQGYTIGGARLRLEGDGAKSESALSNQIIKQVRMELEEVLQLLRR HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRH CCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCHHHHH DVLMVRQIRGLLYEQGYTIGGARLRLEGDGAKSESALSNQIIKQVRMELEEVLQLLRR HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA