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The map label for this gene is rimP [H]

Identifier: 66767927

GI number: 66767927

Start: 1923821

End: 1924411

Strand: Direct

Name: rimP [H]

Synonym: XC_1603

Alternate gene names: 66767927

Gene position: 1923821-1924411 (Clockwise)

Preceding gene: 66767926

Following gene: 66767928

Centisome position: 37.37

GC content: 61.59

Gene sequence:

>591_bases
GTGAGCGAAAAAGCGACCGAAATCGCCAATCTGCTGGGTCCAACGGTTGAGTCCTTGGGTCTGGAACTGCTGGGTGTCGA
ATATCTTCCGGCCCCGGGTGGCGCAACGTTGCGCCTGTATATCGATGTGCCGCTCGCCGAGCAGCCCGATCGCATCATCA
ACGTCGATGACTGCGAGCGCGTGAGCCGCGAAGTGTCTGCCCAGTTGGACGTCGAAGATCCAATCAGCGGCAATTACACC
CTGGAAGTCTCCTCGCCAGGTGTGGATCGTCCCTTGTTCACGCTGGATCAGTTCGCCCGCCATGTCGGCGAGTCCGCCAA
GATCGTGTTGAAGCTGGCGCAGGATGGCCGGCGCCGCTTTCAGGGCCAGATCGTCCGCATCGACACTGAAGCTGCTGCAG
TCGTGTTCTCGGTCGATGGCAAGGACGTGCAGATCGGCTTCGGCAATATCGACAAGGCGCGCATCCTGCCGGACTGGGTC
GCACTGGGCCTGGCACCGCAGAAACCGAATAAGCCCGGCCCGAAAAAACCCGGGCACGACAAGAAGAAACCATCCAACGA
GCCGGCGGCTGGCAAGCCGCGCGCGGAGTGA

Upstream 100 bases:

>100_bases
CACGCAAGGGGCCCATCGGGCCCCTTGTTTTTTCCGGAACCGGAAAGTTTGCTGCCGGTTGCCGGGGGTTCTACTGGCAA
TCATCTGATCAGGGCAGTCT

Downstream 100 bases:

>100_bases
CTAAATGAGCAAGGAACTTTTGCTGGTAGTGGATGCGGTCGCCAACGAAAAAGGCGTGCCGCGTGAGGTGATCTTCGACG
CGATCGAGGCCGCTTTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSEKATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSREVSAQLDVEDPISGNYT
LEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQIVRIDTEAAAVVFSVDGKDVQIGFGNIDKARILPDWV
ALGLAPQKPNKPGPKKPGHDKKKPSNEPAAGKPRAE

Sequences:

>Translated_196_residues
MSEKATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSREVSAQLDVEDPISGNYT
LEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQIVRIDTEAAAVVFSVDGKDVQIGFGNIDKARILPDWV
ALGLAPQKPNKPGPKKPGHDKKKPSNEPAAGKPRAE
>Mature_195_residues
SEKATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSREVSAQLDVEDPISGNYTL
EVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQIVRIDTEAAAVVFSVDGKDVQIGFGNIDKARILPDWVA
LGLAPQKPNKPGPKKPGHDKKKPSNEPAAGKPRAE

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=159, Percent_Identity=45.9119496855346, Blast_Score=134, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 21180; Mature: 21049

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCER
CCHHHHHHHHHHCCCHHHCCEEEECEEEECCCCCCEEEEEEECCCCCCCCCEECCHHHHH
VSREVSAQLDVEDPISGNYTLEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRF
HHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
QGQIVRIDTEAAAVVFSVDGKDVQIGFGNIDKARILPDWVALGLAPQKPNKPGPKKPGHD
CCEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
KKKPSNEPAAGKPRAE
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEKATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCER
CHHHHHHHHHHCCCHHHCCEEEECEEEECCCCCCEEEEEEECCCCCCCCCEECCHHHHH
VSREVSAQLDVEDPISGNYTLEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRF
HHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
QGQIVRIDTEAAAVVFSVDGKDVQIGFGNIDKARILPDWVALGLAPQKPNKPGPKKPGHD
CCEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
KKKPSNEPAAGKPRAE
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]