| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is nuoN [H]
Identifier: 66767926
GI number: 66767926
Start: 1921884
End: 1923344
Strand: Direct
Name: nuoN [H]
Synonym: XC_1602
Alternate gene names: 66767926
Gene position: 1921884-1923344 (Clockwise)
Preceding gene: 66767925
Following gene: 66767927
Centisome position: 37.33
GC content: 64.54
Gene sequence:
>1461_bases ATGACCACGCCAACGCTCGCGCCGTTGACCACCGCTGACCTGGCTCCGCTCGCACCGGAGCTGGTGCTGATCGGCGGTGC CTTCGCACTGTTGATGATCGATCTGTTCGTGAGCCAGCGGCACAAGGTCTGGACCCACCTGTTCTCTGTCGCAGTCCTGG CCGTGGTGCTGGTGATGCTGGCAACCGGCACGGGCGGGCAGGGCGAAGCCTTCCACGGCATGTTCGTGCGCGACACCGCC GCCGATGTCATGAAGACGGTGATCGTGCTGGTCAGTGGCCTGAGCCTGGTTTACGGCTGGAGCTATCTGCGCGAGCGCAA TCTGTACCAGGGCGAGATTCCGGTGCTGGTGCTGTTTGCGACTGCCGGCATGATGCTGCTCACCTCCGCCGGCAGCCTGC TGATGGTCTACCTTGGCCTGGAGTTGCTGGCGCTGTGCTCGTATGCGCTGGTGGCGTCCAACCGGGACAACGGCCTGGCG ACCGAAGCGGCGATGAAGTACTTCGTGCTGGGTTCGCTGGCCTCCGGTCTGCTGTTGTACGGCATGTCGCTGGTGTATGG CGCCACGGGGACGCTGAGCCTGGCCGGCATCCACGACGCAATCGAAGGCTCGGGCGAGCGCACGCTGTTGCTGACCGGTA CGATCTTCATGATCGCCGGTGTGGCCTTCAAACTGGGTGCCGCGCCGTTCCATATGTGGCTGCCCGACGTCTATCAGGGT GCGCCAGCGCCGATCGCGCTGTTCATCAGCTCCGCGCCCAAGCTGGCCGCCTTCGGCATGGCGTATCGCCTGCTCGAAAT GGGCATGGGCCCGCTGTCGCCGCAGTGGCATCTGCTGATCGGTGGCCTGTCAGCTTTGTCGCTGGTGATCGGTAACCTGA TGGCCATCGCGCAGAGCAACCTCAAGCGCATGCTGGCGTACTCAACGGTCTCGCATATCGGCTTCCTGCTGATGGGCGTG GCAGGTGGCGGCGAGGAGGGCTATGCCGCCGCGATGTTCTACGCGGTGAGCTACACCATCATGTCCACGGCGTCGTTCGG CGCGATCATTGCGCTGTCGCGCAGCGGCTTCGAAGCTGAGCACATCGACGACTTCAAGGGCCTGAACGCACGCAACCCGT GGATGGCTGGCCTGGTGCTCTGCATCATGGCGTCGTTGGCCGGCATTCCGCCGTTCCTCGGTTTCTGGACCAAGCTGGCC GTGCTCGGCGCGGCGGTGAAGGGCGACATGTTGTGGCTCGCGATGGTCGGCGTGCTGTGCGCGGTGATCGGTGCGTATTA CTACCTGCGCGTCATCAAGGTCATGTACTTCGACGAACCGGTTGGCGAGCCGCTGCCTGCCAACAAGGATCGCGTGCTGG GGACGGTGCTGGGTGTCAATGCGCTCGCGTTGCTCGCACTGGGCCTGGCCTGGAACCCGATCATGGTGTGGTGCCAGCGC GCGTTTGCGGGCCTGGCCTGA
Upstream 100 bases:
>100_bases GACCGACCTGATGGAACCGTCGATCGCCAAGCTGGCGACCCAGATTGCAACGACCAAGCTCTAACCGCTTGCCGTCCGTA TTGATTTTCAGGATTTGATG
Downstream 100 bases:
>100_bases TCGCATAGCTAGTGCCCGCTGTGTGCAGGCACGTGTCCTGACTAAACTGGCAGGGCACTGAAATAAAGTCGTGATCGCTG TTTCGTTTTTGTGTCATCGC
Product: NADH dehydrogenase subunit N
Products: NA
Alternate protein names: NADH dehydrogenase I subunit N; NDH-1 subunit N [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTTPTLAPLTTADLAPLAPELVLIGGAFALLMIDLFVSQRHKVWTHLFSVAVLAVVLVMLATGTGGQGEAFHGMFVRDTA ADVMKTVIVLVSGLSLVYGWSYLRERNLYQGEIPVLVLFATAGMMLLTSAGSLLMVYLGLELLALCSYALVASNRDNGLA TEAAMKYFVLGSLASGLLLYGMSLVYGATGTLSLAGIHDAIEGSGERTLLLTGTIFMIAGVAFKLGAAPFHMWLPDVYQG APAPIALFISSAPKLAAFGMAYRLLEMGMGPLSPQWHLLIGGLSALSLVIGNLMAIAQSNLKRMLAYSTVSHIGFLLMGV AGGGEEGYAAAMFYAVSYTIMSTASFGAIIALSRSGFEAEHIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTKLA VLGAAVKGDMLWLAMVGVLCAVIGAYYYLRVIKVMYFDEPVGEPLPANKDRVLGTVLGVNALALLALGLAWNPIMVWCQR AFAGLA
Sequences:
>Translated_486_residues MTTPTLAPLTTADLAPLAPELVLIGGAFALLMIDLFVSQRHKVWTHLFSVAVLAVVLVMLATGTGGQGEAFHGMFVRDTA ADVMKTVIVLVSGLSLVYGWSYLRERNLYQGEIPVLVLFATAGMMLLTSAGSLLMVYLGLELLALCSYALVASNRDNGLA TEAAMKYFVLGSLASGLLLYGMSLVYGATGTLSLAGIHDAIEGSGERTLLLTGTIFMIAGVAFKLGAAPFHMWLPDVYQG APAPIALFISSAPKLAAFGMAYRLLEMGMGPLSPQWHLLIGGLSALSLVIGNLMAIAQSNLKRMLAYSTVSHIGFLLMGV AGGGEEGYAAAMFYAVSYTIMSTASFGAIIALSRSGFEAEHIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTKLA VLGAAVKGDMLWLAMVGVLCAVIGAYYYLRVIKVMYFDEPVGEPLPANKDRVLGTVLGVNALALLALGLAWNPIMVWCQR AFAGLA >Mature_485_residues TTPTLAPLTTADLAPLAPELVLIGGAFALLMIDLFVSQRHKVWTHLFSVAVLAVVLVMLATGTGGQGEAFHGMFVRDTAA DVMKTVIVLVSGLSLVYGWSYLRERNLYQGEIPVLVLFATAGMMLLTSAGSLLMVYLGLELLALCSYALVASNRDNGLAT EAAMKYFVLGSLASGLLLYGMSLVYGATGTLSLAGIHDAIEGSGERTLLLTGTIFMIAGVAFKLGAAPFHMWLPDVYQGA PAPIALFISSAPKLAAFGMAYRLLEMGMGPLSPQWHLLIGGLSALSLVIGNLMAIAQSNLKRMLAYSTVSHIGFLLMGVA GGGEEGYAAAMFYAVSYTIMSTASFGAIIALSRSGFEAEHIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTKLAV LGAAVKGDMLWLAMVGVLCAVIGAYYYLRVIKVMYFDEPVGEPLPANKDRVLGTVLGVNALALLALGLAWNPIMVWCQRA FAGLA
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1007
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 2 (chain N)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 2 family [H]
Homologues:
Organism=Homo sapiens, GI251831108, Length=319, Percent_Identity=25.3918495297806, Blast_Score=79, Evalue=9e-15, Organism=Escherichia coli, GI145693160, Length=475, Percent_Identity=33.4736842105263, Blast_Score=218, Evalue=9e-58, Organism=Escherichia coli, GI1788614, Length=368, Percent_Identity=27.445652173913, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1788827, Length=324, Percent_Identity=27.7777777777778, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788831, Length=332, Percent_Identity=25.9036144578313, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1788613, Length=333, Percent_Identity=27.027027027027, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788829, Length=347, Percent_Identity=25.9365994236311, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010096 - InterPro: IPR001750 [H]
Pfam domain/function: PF00361 Oxidored_q1 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 51356; Mature: 51225
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTLAPLTTADLAPLAPELVLIGGAFALLMIDLFVSQRHKVWTHLFSVAVLAVVLVML CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGTGGQGEAFHGMFVRDTAADVMKTVIVLVSGLSLVYGWSYLRERNLYQGEIPVLVLFA HCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHH TAGMMLLTSAGSLLMVYLGLELLALCSYALVASNRDNGLATEAAMKYFVLGSLASGLLLY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GMSLVYGATGTLSLAGIHDAIEGSGERTLLLTGTIFMIAGVAFKLGAAPFHMWLPDVYQG HHHHHHCCCCCEEEHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHCCHHHCC APAPIALFISSAPKLAAFGMAYRLLEMGMGPLSPQWHLLIGGLSALSLVIGNLMAIAQSN CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LKRMLAYSTVSHIGFLLMGVAGGGEEGYAAAMFYAVSYTIMSTASFGAIIALSRSGFEAE HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHH HIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTKLAVLGAAVKGDMLWLAMVGVLC HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVIGAYYYLRVIKVMYFDEPVGEPLPANKDRVLGTVLGVNALALLALGLAWNPIMVWCQR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AFAGLA HHHCCC >Mature Secondary Structure TTPTLAPLTTADLAPLAPELVLIGGAFALLMIDLFVSQRHKVWTHLFSVAVLAVVLVML CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGTGGQGEAFHGMFVRDTAADVMKTVIVLVSGLSLVYGWSYLRERNLYQGEIPVLVLFA HCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHH TAGMMLLTSAGSLLMVYLGLELLALCSYALVASNRDNGLATEAAMKYFVLGSLASGLLLY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GMSLVYGATGTLSLAGIHDAIEGSGERTLLLTGTIFMIAGVAFKLGAAPFHMWLPDVYQG HHHHHHCCCCCEEEHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHCCHHHCC APAPIALFISSAPKLAAFGMAYRLLEMGMGPLSPQWHLLIGGLSALSLVIGNLMAIAQSN CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LKRMLAYSTVSHIGFLLMGVAGGGEEGYAAAMFYAVSYTIMSTASFGAIIALSRSGFEAE HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHH HIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTKLAVLGAAVKGDMLWLAMVGVLC HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVIGAYYYLRVIKVMYFDEPVGEPLPANKDRVLGTVLGVNALALLALGLAWNPIMVWCQR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AFAGLA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA