| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767909
Identifier: 66767909
GI number: 66767909
Start: 1904588
End: 1905997
Strand: Reverse
Name: 66767909
Synonym: XC_1585
Alternate gene names: NA
Gene position: 1905997-1904588 (Counterclockwise)
Preceding gene: 66767910
Following gene: 66767898
Centisome position: 37.02
GC content: 48.01
Gene sequence:
>1410_bases ATGGCAAACAACGCGATGGACAGGGGAAAATCAATGACGACAAGATTCATAATGCGCCATCAAGCGGAGCTCATTGCGCT CTTCATTGCATCATCGGCTTTCTTTGCAATCCAGCTTGCCATCGATGCCAAGGCATTTACCGGAGATGCCGGAGCCTACT GGGCCTTGAGCTCAGCAATTACTGAAGGGACCTTCCCCAAGACGATTCGCGGATATTCCTACCCACTTCTACTGACACCA TTTAGATTCGCTTTTGACCATTCAGAGCAGGCTGGATTGTTATTACTCAAGCTCGGGCAATCGATAGGATACGGCTACTT GTTTTCGATCCTCCTTCCGAACCTTTATCAGGTCATATTTGACGCCAAACCGTCGGCATTCACCAGACTCATCCCTGCAC TCCTGATGGCCTTTGCATTTCCCGGATTGATATCTTACCCGCTCAGCGACGCACCTTCTTTTGGGATAATGGCGCTAGCC TTATATGCTTGCATCAAGGCCATCAAATCACAGTCCTTCAGTCTTTTGATCGTAGCAGGGCTACTTGCCTATTTAGCCTA CAACACACGAACCATCTATTTATTTTCCTTCTTTACACTCATGGTCATTGCTGCGATTTTTTTCTCAAAAAGCCTTAAGC AAAGATTTTTTGCATCGACATGCTTTCTACTAGGCGCACTAGTAGGCGCAGCCCCCCAAATGGCAATTAATTACAGCCAC CACTCAACGCGCACCCCACTCGTAGTGACGGATGTCCGCGGCGCATCCCTATTTGCGCGGCAGCTGGCATGGGGAATGAT CGTTGACAAATATGAAACACATATTGACCCCCAGACCAAAAAAGCCATACCCGTATTCTATGCAAACAACAATGGCGCAC TCATCCTCCAACAAAATGGAGGCTTTGAGAACAATCAATCAGTCGTAAAAATAGCTGGCCTGATGACCCAGCATCCAATT ACATTTATAAATATATATCTCCGTCACATTGCGTTAGCTCTCGATGTGAGGGATGGAGAGGTCTACACTCGGAACCCTAC GTCAGAAAAAAATATTCAGTCGCTGATTTTACTTAGCATCGTCTTATTTGGGCTGACCCAACTTGGCCGAGCAATCTTCT TTCAGGCCTCTAGTGAGCCGGTAAATCGCAGACTTCTTTACACGCTCGTGCTCCTGGCGCCTTGCATAGCCATCATTCCC GGCGCCATTGAAACTCGCTTCTTCTTGCCAATTCATTGCCTTTCCTACTGTGCCCTTGCGTTTGGTGGAATAAAAAAGGA AGCCATCGCAATGCAGCTAGCGTGCACAGCAATCTTGACAGCAGCGATCTTCACGTTTGCCGCAAAGTCGGCAGACAGCC CAATCCACTCCCGACCCGAGTCTTACATCCCCACCCCATCGAATATATGA
Upstream 100 bases:
>100_bases TGGCTCGCACCGGGTGCGTCCTTTGGAGAACGCAAGCGATGCATAAGTAAGCGACACTGCAACTGACAGGCCACATCTCG CGTCGCTCGCGACCGGGAAC
Downstream 100 bases:
>100_bases AGCAGGCAACGATCTGGCCACTATGATCGCGTGCAAACTTATGCATCAGTCAACCACTCGAGTGCCTATCCATCCTCAGT GATTGACGATCTCGCCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MANNAMDRGKSMTTRFIMRHQAELIALFIASSAFFAIQLAIDAKAFTGDAGAYWALSSAITEGTFPKTIRGYSYPLLLTP FRFAFDHSEQAGLLLLKLGQSIGYGYLFSILLPNLYQVIFDAKPSAFTRLIPALLMAFAFPGLISYPLSDAPSFGIMALA LYACIKAIKSQSFSLLIVAGLLAYLAYNTRTIYLFSFFTLMVIAAIFFSKSLKQRFFASTCFLLGALVGAAPQMAINYSH HSTRTPLVVTDVRGASLFARQLAWGMIVDKYETHIDPQTKKAIPVFYANNNGALILQQNGGFENNQSVVKIAGLMTQHPI TFINIYLRHIALALDVRDGEVYTRNPTSEKNIQSLILLSIVLFGLTQLGRAIFFQASSEPVNRRLLYTLVLLAPCIAIIP GAIETRFFLPIHCLSYCALAFGGIKKEAIAMQLACTAILTAAIFTFAAKSADSPIHSRPESYIPTPSNI
Sequences:
>Translated_469_residues MANNAMDRGKSMTTRFIMRHQAELIALFIASSAFFAIQLAIDAKAFTGDAGAYWALSSAITEGTFPKTIRGYSYPLLLTP FRFAFDHSEQAGLLLLKLGQSIGYGYLFSILLPNLYQVIFDAKPSAFTRLIPALLMAFAFPGLISYPLSDAPSFGIMALA LYACIKAIKSQSFSLLIVAGLLAYLAYNTRTIYLFSFFTLMVIAAIFFSKSLKQRFFASTCFLLGALVGAAPQMAINYSH HSTRTPLVVTDVRGASLFARQLAWGMIVDKYETHIDPQTKKAIPVFYANNNGALILQQNGGFENNQSVVKIAGLMTQHPI TFINIYLRHIALALDVRDGEVYTRNPTSEKNIQSLILLSIVLFGLTQLGRAIFFQASSEPVNRRLLYTLVLLAPCIAIIP GAIETRFFLPIHCLSYCALAFGGIKKEAIAMQLACTAILTAAIFTFAAKSADSPIHSRPESYIPTPSNI >Mature_468_residues ANNAMDRGKSMTTRFIMRHQAELIALFIASSAFFAIQLAIDAKAFTGDAGAYWALSSAITEGTFPKTIRGYSYPLLLTPF RFAFDHSEQAGLLLLKLGQSIGYGYLFSILLPNLYQVIFDAKPSAFTRLIPALLMAFAFPGLISYPLSDAPSFGIMALAL YACIKAIKSQSFSLLIVAGLLAYLAYNTRTIYLFSFFTLMVIAAIFFSKSLKQRFFASTCFLLGALVGAAPQMAINYSHH STRTPLVVTDVRGASLFARQLAWGMIVDKYETHIDPQTKKAIPVFYANNNGALILQQNGGFENNQSVVKIAGLMTQHPIT FINIYLRHIALALDVRDGEVYTRNPTSEKNIQSLILLSIVLFGLTQLGRAIFFQASSEPVNRRLLYTLVLLAPCIAIIPG AIETRFFLPIHCLSYCALAFGGIKKEAIAMQLACTAILTAAIFTFAAKSADSPIHSRPESYIPTPSNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51452; Mature: 51321
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNAMDRGKSMTTRFIMRHQAELIALFIASSAFFAIQLAIDAKAFTGDAGAYWALSSAI CCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECEEEECCCCHHHHHHHHH TEGTFPKTIRGYSYPLLLTPFRFAFDHSEQAGLLLLKLGQSIGYGYLFSILLPNLYQVIF HCCCCCCHHCCCCCCEEECCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH DAKPSAFTRLIPALLMAFAFPGLISYPLSDAPSFGIMALALYACIKAIKSQSFSLLIVAG CCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH LLAYLAYNTRTIYLFSFFTLMVIAAIFFSKSLKQRFFASTCFLLGALVGAAPQMAINYSH HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC HSTRTPLVVTDVRGASLFARQLAWGMIVDKYETHIDPQTKKAIPVFYANNNGALILQQNG CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCC GFENNQSVVKIAGLMTQHPITFINIYLRHIALALDVRDGEVYTRNPTSEKNIQSLILLSI CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCEEEECCCCCHHHHHHHHHHHH VLFGLTQLGRAIFFQASSEPVNRRLLYTLVLLAPCIAIIPGAIETRFFLPIHCLSYCALA HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHH FGGIKKEAIAMQLACTAILTAAIFTFAAKSADSPIHSRPESYIPTPSNI HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ANNAMDRGKSMTTRFIMRHQAELIALFIASSAFFAIQLAIDAKAFTGDAGAYWALSSAI CCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECEEEECCCCHHHHHHHHH TEGTFPKTIRGYSYPLLLTPFRFAFDHSEQAGLLLLKLGQSIGYGYLFSILLPNLYQVIF HCCCCCCHHCCCCCCEEECCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH DAKPSAFTRLIPALLMAFAFPGLISYPLSDAPSFGIMALALYACIKAIKSQSFSLLIVAG CCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH LLAYLAYNTRTIYLFSFFTLMVIAAIFFSKSLKQRFFASTCFLLGALVGAAPQMAINYSH HHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC HSTRTPLVVTDVRGASLFARQLAWGMIVDKYETHIDPQTKKAIPVFYANNNGALILQQNG CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCC GFENNQSVVKIAGLMTQHPITFINIYLRHIALALDVRDGEVYTRNPTSEKNIQSLILLSI CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCEEEECCCCCHHHHHHHHHHHH VLFGLTQLGRAIFFQASSEPVNRRLLYTLVLLAPCIAIIPGAIETRFFLPIHCLSYCALA HHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEHHHHHHHHHHHH FGGIKKEAIAMQLACTAILTAAIFTFAAKSADSPIHSRPESYIPTPSNI HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA