| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66767886
Identifier: 66767886
GI number: 66767886
Start: 1880538
End: 1881527
Strand: Reverse
Name: 66767886
Synonym: XC_1562
Alternate gene names: NA
Gene position: 1881527-1880538 (Counterclockwise)
Preceding gene: 66767887
Following gene: 66767884
Centisome position: 36.54
GC content: 67.68
Gene sequence:
>990_bases ATGACCACACGGATGTTGCGATGGCCGCTGGCCGTCGCCCTCGCCACGGTGCTGGCCGGCTGTGGCCAGCAGAGCGAGCA ACAGCAGCTGGATGCGCTGCGTTCGGGCCTGCAATACCGGGGCTACCGGCAGTTCAGTGAGCATGGGTTGCCGGTCGCCT TTGCCGCCTACCAGCGCGGCGGCAGCCTGCTGGACACGCCGCCGGAACCACTGACTGCCGACGACATCTGCATGCTCCAC GCGATGCTGTCCTACACCGCACTGTCCGCCAACAAACTGCTGCCCGCGATCGCCGAAGCGGACCTGCTGGAGCGCGATTG CGGGTCGCAGGGCGCGCTGATCGCCACGGCACTGCGCTCGGTGGCGTTCGAACGCAAGCACTGGCCGCAGCTTGCGCAGC GCTCCAGCGACAGCCTGTGGAAACACGACGCCAATCCCGACGACACCCTCACCACCTTGCTCATGCTGCACGTGGTGATG GCTTATGCGGCCATCCAGGACAAGCGCTGGGATGCGGCGGTGCTGCATGCGGATGCGATCGGCCTGGCGGTGCGTGCACC CTGGCTGGGCGAGCTGGCGCGCGTGGGCCAGGATTTTGCCGAGCACCGGTTGCTGGAAGGCCTGCGCCGGCTCAAACGCC TGAGCGAAAACCCGAAGGTGCCGCCGGACGTGCGCGCCGAACTGCAGGCATTGATCACCCGCATCGAAGCGGAGAGTGGC GACCTGGACTCGAGCTGGGCGATCGCCCGCATCCTCACCCGCTTCATGTGGCAGGCGATCGAACAGAACGCGGCGCCTGC CACCAGGGATCTGATGCGTTTTGCCGAGCAGCAGACCAGCAAACTGGGCCCCGACGCACTACGGCAGGGCTGGCGTGCAC GCTGGACACGCTGGTGGGCGAAGGCACAGACCTTCTGGCAGGACGCCGCGCCCGCGTCGGACAAGAATGCGGATGCCGCT CCAGCAGCGCCCGCTCCCGCCACGCAGTGA
Upstream 100 bases:
>100_bases ACGCGCACACGCCGCTCCACTGACAGACAAGTGCGGCACCGGCTACGCCAACGCAGTACGCTGCCATGGCGCACCGGACA CTTCCCACCTAGGACCCTGC
Downstream 100 bases:
>100_bases CTGCGTCCCGGCCGGTATCCGCGGCAGCACGCGGCCGACCGCGTGCTGGCCGACGCCTACGCCATGAGTCCCGTCGGGAA GCTGTAGCTCTCAGCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTTRMLRWPLAVALATVLAGCGQQSEQQQLDALRSGLQYRGYRQFSEHGLPVAFAAYQRGGSLLDTPPEPLTADDICMLH AMLSYTALSANKLLPAIAEADLLERDCGSQGALIATALRSVAFERKHWPQLAQRSSDSLWKHDANPDDTLTTLLMLHVVM AYAAIQDKRWDAAVLHADAIGLAVRAPWLGELARVGQDFAEHRLLEGLRRLKRLSENPKVPPDVRAELQALITRIEAESG DLDSSWAIARILTRFMWQAIEQNAAPATRDLMRFAEQQTSKLGPDALRQGWRARWTRWWAKAQTFWQDAAPASDKNADAA PAAPAPATQ
Sequences:
>Translated_329_residues MTTRMLRWPLAVALATVLAGCGQQSEQQQLDALRSGLQYRGYRQFSEHGLPVAFAAYQRGGSLLDTPPEPLTADDICMLH AMLSYTALSANKLLPAIAEADLLERDCGSQGALIATALRSVAFERKHWPQLAQRSSDSLWKHDANPDDTLTTLLMLHVVM AYAAIQDKRWDAAVLHADAIGLAVRAPWLGELARVGQDFAEHRLLEGLRRLKRLSENPKVPPDVRAELQALITRIEAESG DLDSSWAIARILTRFMWQAIEQNAAPATRDLMRFAEQQTSKLGPDALRQGWRARWTRWWAKAQTFWQDAAPASDKNADAA PAAPAPATQ >Mature_328_residues TTRMLRWPLAVALATVLAGCGQQSEQQQLDALRSGLQYRGYRQFSEHGLPVAFAAYQRGGSLLDTPPEPLTADDICMLHA MLSYTALSANKLLPAIAEADLLERDCGSQGALIATALRSVAFERKHWPQLAQRSSDSLWKHDANPDDTLTTLLMLHVVMA YAAIQDKRWDAAVLHADAIGLAVRAPWLGELARVGQDFAEHRLLEGLRRLKRLSENPKVPPDVRAELQALITRIEAESGD LDSSWAIARILTRFMWQAIEQNAAPATRDLMRFAEQQTSKLGPDALRQGWRARWTRWWAKAQTFWQDAAPASDKNADAAP AAPAPATQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36462; Mature: 36331
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRMLRWPLAVALATVLAGCGQQSEQQQLDALRSGLQYRGYRQFSEHGLPVAFAAYQRG CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCC GSLLDTPPEPLTADDICMLHAMLSYTALSANKLLPAIAEADLLERDCGSQGALIATALRS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VAFERKHWPQLAQRSSDSLWKHDANPDDTLTTLLMLHVVMAYAAIQDKRWDAAVLHADAI HHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLAVRAPWLGELARVGQDFAEHRLLEGLRRLKRLSENPKVPPDVRAELQALITRIEAESG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC DLDSSWAIARILTRFMWQAIEQNAAPATRDLMRFAEQQTSKLGPDALRQGWRARWTRWWA CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KAQTFWQDAAPASDKNADAAPAAPAPATQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTRMLRWPLAVALATVLAGCGQQSEQQQLDALRSGLQYRGYRQFSEHGLPVAFAAYQRG CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCC GSLLDTPPEPLTADDICMLHAMLSYTALSANKLLPAIAEADLLERDCGSQGALIATALRS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VAFERKHWPQLAQRSSDSLWKHDANPDDTLTTLLMLHVVMAYAAIQDKRWDAAVLHADAI HHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLAVRAPWLGELARVGQDFAEHRLLEGLRRLKRLSENPKVPPDVRAELQALITRIEAESG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC DLDSSWAIARILTRFMWQAIEQNAAPATRDLMRFAEQQTSKLGPDALRQGWRARWTRWWA CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KAQTFWQDAAPASDKNADAAPAAPAPATQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA