| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767835
Identifier: 66767835
GI number: 66767835
Start: 1818307
End: 1819062
Strand: Reverse
Name: 66767835
Synonym: XC_1509
Alternate gene names: NA
Gene position: 1819062-1818307 (Counterclockwise)
Preceding gene: 66767837
Following gene: 66767831
Centisome position: 35.33
GC content: 67.86
Gene sequence:
>756_bases ATGAAGCTCACTGCCCACGTTCTGGACGGACACACGCTGGATATTCGCCCCGCACCGCACGAACGCGCCTGGATGGATGC CACCGACCAACGCTACGCCTACCGTTGCCTGCCGCTGGCCATCGCCAATGCGCATGGCTGGGAGCTGCTGTGCCAGGCCG GCTTCGAGGCGGTCTGGGATGGCGGCGATGGGCTGGGCGCGGTGGTCATCACCGCCGATGCCGGCAACGCCGCGCCGGCG ATCAGCCATTTTGGCTACGGCATGCTGACCTTCCACGTGCCCTGCCTGTTTCGGACCGACGCGGGCGTGGACCTGTTCGT CACCGGGCCGTTGAACTGTCCCAAGGACGGCATCGGTGCGCTGAGCGGCATCGTGGAAACCGACTGGAGCCCGTACACCT TCACCATGAACTGGCGTTTTACCCGGCCGGGGCGGGTGCGCTTCGAGGCGGGTGAGCCGTTTTGCCATCTGTTCCCGCTA CAGCGGCAGTTGATCGAACAGGTGCAGCCGCAGTGGCAGCCGTTGTCCGAAACGCCGGCGCTGGCGCAGCAGCATGCCGA CTGGACCGACAGCCGCAGCCGTTTCCTGGAAGCCTTGCCGGACGCGCAATCGGCGGCGGCGCGCGAGAAATGGCAGCGCG GCTACTTTCGTGGCGTGACTGCGCCTGCGCAGACGCCGGTGGCCGGGCACCGCACGCGGCTGCGCCTGCCGCTATTCACG CGTACCGGCGCGTCGCTTGACCCAGCCGGCGAGTGA
Upstream 100 bases:
>100_bases ATGTGGTCAGGATGGGGGTCTCGCGCCGGGGAGACAAGTCGCGCGGCTGAACGTGGCACGCGGCTATCATCGCCAGCCCG CTGCCAGCCACCGCGCACGC
Downstream 100 bases:
>100_bases TCGACTGACTGCCTAGCGCGGCGCCTTGTCCGGCGCCGGCCTGGCGGGCGCACGCTCGCGCGCATCGCGGTCCACCACGT CCACCTGCGGCTCTTTCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MKLTAHVLDGHTLDIRPAPHERAWMDATDQRYAYRCLPLAIANAHGWELLCQAGFEAVWDGGDGLGAVVITADAGNAAPA ISHFGYGMLTFHVPCLFRTDAGVDLFVTGPLNCPKDGIGALSGIVETDWSPYTFTMNWRFTRPGRVRFEAGEPFCHLFPL QRQLIEQVQPQWQPLSETPALAQQHADWTDSRSRFLEALPDAQSAAAREKWQRGYFRGVTAPAQTPVAGHRTRLRLPLFT RTGASLDPAGE
Sequences:
>Translated_251_residues MKLTAHVLDGHTLDIRPAPHERAWMDATDQRYAYRCLPLAIANAHGWELLCQAGFEAVWDGGDGLGAVVITADAGNAAPA ISHFGYGMLTFHVPCLFRTDAGVDLFVTGPLNCPKDGIGALSGIVETDWSPYTFTMNWRFTRPGRVRFEAGEPFCHLFPL QRQLIEQVQPQWQPLSETPALAQQHADWTDSRSRFLEALPDAQSAAAREKWQRGYFRGVTAPAQTPVAGHRTRLRLPLFT RTGASLDPAGE >Mature_251_residues MKLTAHVLDGHTLDIRPAPHERAWMDATDQRYAYRCLPLAIANAHGWELLCQAGFEAVWDGGDGLGAVVITADAGNAAPA ISHFGYGMLTFHVPCLFRTDAGVDLFVTGPLNCPKDGIGALSGIVETDWSPYTFTMNWRFTRPGRVRFEAGEPFCHLFPL QRQLIEQVQPQWQPLSETPALAQQHADWTDSRSRFLEALPDAQSAAAREKWQRGYFRGVTAPAQTPVAGHRTRLRLPLFT RTGASLDPAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27722; Mature: 27722
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTAHVLDGHTLDIRPAPHERAWMDATDQRYAYRCLPLAIANAHGWELLCQAGFEAVWD CCEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHCCCEEEC GGDGLGAVVITADAGNAAPAISHFGYGMLTFHVPCLFRTDAGVDLFVTGPLNCPKDGIGA CCCCCEEEEEEECCCCCCCHHHHCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCHHHHH LSGIVETDWSPYTFTMNWRFTRPGRVRFEAGEPFCHLFPLQRQLIEQVQPQWQPLSETPA HHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCCCCCCHH LAQQHADWTDSRSRFLEALPDAQSAAAREKWQRGYFRGVTAPAQTPVAGHRTRLRLPLFT HHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEE RTGASLDPAGE CCCCCCCCCCC >Mature Secondary Structure MKLTAHVLDGHTLDIRPAPHERAWMDATDQRYAYRCLPLAIANAHGWELLCQAGFEAVWD CCEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHCCCEEEC GGDGLGAVVITADAGNAAPAISHFGYGMLTFHVPCLFRTDAGVDLFVTGPLNCPKDGIGA CCCCCEEEEEEECCCCCCCHHHHCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCHHHHH LSGIVETDWSPYTFTMNWRFTRPGRVRFEAGEPFCHLFPLQRQLIEQVQPQWQPLSETPA HHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCCCCCCHH LAQQHADWTDSRSRFLEALPDAQSAAAREKWQRGYFRGVTAPAQTPVAGHRTRLRLPLFT HHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEE RTGASLDPAGE CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA