Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

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The map label for this gene is yjgA [C]

Identifier: 66767837

GI number: 66767837

Start: 1820776

End: 1821357

Strand: Reverse

Name: yjgA [C]

Synonym: XC_1511

Alternate gene names: 66767837

Gene position: 1821357-1820776 (Counterclockwise)

Preceding gene: 66767840

Following gene: 66767835

Centisome position: 35.38

GC content: 64.6

Gene sequence:

>582_bases
ATGCGCGGACGCGATGAAGATACCGGTGAATTTCGTGGCGCCAGCCGCAGCCAGCAACGGCGCGAGGCCTTGGAAATTTT
CGACCTGGGCGAAAAGCTGGTGGCGCTCACCCCGGCGCAGCTGGCCAAGTTGCCGGTGCCCGAGTCGTTGATCCCGCACA
TCGAAGAGAGCAAGCGCATCACCTCGCATATCGCGCACAAGCGCCAGCTGGCGTTTCTGGCCAAGCACATGCGCCGCGAG
GACGACGAAACCCTGGATGCGATCCGCGATGCGCTGGATGCCAACAGCGATACCGCGCGCCGCGAAGTGGCGGCGATTCA
CCGCGTCGAACGCTGGCGCGAGCGCCTGCTCGCCGAAGGCGACGTCGCGCTGGCCGAATTGCTGGAAGCCTACCCGGCTG
CCGACCGCCAGCAACTGCGTCAACTGGTGCGCAACGCGATCCACGAGCGGGCCAAGAACAAGCCGCCGCGCGCCTACCGC
GAGCTGTTCCAGGTGCTGCGTGATCTGTCTCAGAAGCCCGGATTGGAGAGTGGGGATGCGGGATTGGAAGACGAAGAGTC
GGCGTCGGAAAACGACGAATAA

Upstream 100 bases:

>100_bases
ATCCATGGCCGCAGTGTCTGAATTTGGTGCGGAGTCTTCCGCCGGAGTCCGGCCGTTCATGGCCGGAAATTTAACTAAAC
ACGTTTTGGGATGTAGTGGC

Downstream 100 bases:

>100_bases
GGCTCCGCCCGATCCACCGAGCCCCGCAACGGCGATTCCTGCCGTTGCAATTCCCCATTCCCGATTCCCGATTCCCCTCT
GCTGAACCGGCAAACCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRGRDEDTGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEESKRITSHIAHKRQLAFLAKHMRRE
DDETLDAIRDALDANSDTARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPRAYR
ELFQVLRDLSQKPGLESGDAGLEDEESASENDE

Sequences:

>Translated_193_residues
MRGRDEDTGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEESKRITSHIAHKRQLAFLAKHMRRE
DDETLDAIRDALDANSDTARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPRAYR
ELFQVLRDLSQKPGLESGDAGLEDEESASENDE
>Mature_193_residues
MRGRDEDTGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEESKRITSHIAHKRQLAFLAKHMRRE
DDETLDAIRDALDANSDTARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPRAYR
ELFQVLRDLSQKPGLESGDAGLEDEESASENDE

Specific function: Unknown

COG id: COG3028

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0307 family

Homologues:

Organism=Escherichia coli, GI1790681, Length=161, Percent_Identity=39.7515527950311, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1511_XANC8 (Q4UWJ4)

Other databases:

- EMBL:   CP000050
- RefSeq:   YP_242599.1
- ProteinModelPortal:   Q4UWJ4
- SMR:   Q4UWJ4
- STRING:   Q4UWJ4
- GeneID:   3381854
- GenomeReviews:   CP000050_GR
- KEGG:   xcb:XC_1511
- eggNOG:   COG3028
- HOGENOM:   HBG677712
- OMA:   KAPWEEE
- PhylomeDB:   Q4UWJ4
- ProtClustDB:   PRK05255
- BioCyc:   XCAM314565:XC_1511-MONOMER
- HAMAP:   MF_00765
- InterPro:   IPR023153
- InterPro:   IPR006839
- PIRSF:   PIRSF016183

Pfam domain/function: PF04751 DUF615

EC number: NA

Molecular weight: Translated: 22002; Mature: 22002

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGRDEDTGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEESKRI
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH
TSHIAHKRQLAFLAKHMRREDDETLDAIRDALDANSDTARREVAAIHRVERWRERLLAEG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPRAYRELFQVLRDLSQKPGLESGDA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
GLEDEESASENDE
CCCCCCCCCCCCC
>Mature Secondary Structure
MRGRDEDTGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEESKRI
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH
TSHIAHKRQLAFLAKHMRREDDETLDAIRDALDANSDTARREVAAIHRVERWRERLLAEG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPRAYRELFQVLRDLSQKPGLESGDA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
GLEDEESASENDE
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA