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The map label for this gene is yddE [C]

Identifier: 66767698

GI number: 66767698

Start: 1655436

End: 1656314

Strand: Reverse

Name: yddE [C]

Synonym: XC_1371

Alternate gene names: 66767698

Gene position: 1656314-1655436 (Counterclockwise)

Preceding gene: 66767704

Following gene: 66767697

Centisome position: 32.17

GC content: 70.31

Gene sequence:

>879_bases
ATGCGCACATTTCGCTACCTGCAACTGGATGTTTTCTCCAACCGCCCTGGCGCTGGCAACCCACTGGGCGTCGTCGTCGA
TGCCGGCGCACTGTCAGCGCAACAGATGCAGCAGATTGCCGCCTGGCTGAACCTGTCGGAGACGGTGTTTTTCCTGCCGG
TCAGCGCGCCGGGCGCGGATTACCACATCCGCATTTTCACCCCGCGCGCGGAGCTGCCGTTTGCCGGGCACCCCAGCGTG
GGCGCTGCCTGGGTTGCCAGGACGCACGGCCTGGTGGGATACCGCCAGGACAACCGGCTGTACCAGCAATGCGCCGCCGG
CGTGCTGCCGGTGGATGTATTCGACCGTCACGACGTGGTGCTGGTGCGTCTGCGCGCGCCGCGCGCGCAGTGCAGCGACA
CCGGCACGCACCACGCCGCTGCGCTGGCGCAGGTCACCCGAGCGTTCGCCATGAGCGCGCAGGCGCCTGCCCTGTGGAAC
AACGGGCCCAGCTGGTGGTTGCTGGAGCTGGCCGACGAGGCCGCGGTGCGGACGGCCGTGCCCGACCTGGCCGCCATCGC
CGCACTCACCGCGGCCAGCGGGGCGGTCGGGCTGGCCATCTACGCCGCCGCGGCCAGCGATGCGGAAGATCTGGTGGTGC
GTGCATTCTGCCCGGGCGACGGCATCCCCGAAGACCCCGTCACCGGCAGCGCCAATGCCTGCATCGCCGCGCGCCTGCTG
GCCGAGGATCGGCTGCCGGGCAGGCAGGGACGCTACGTCGCCAGCCAGGGCCGCGAGGTCGGCCGCGATGGCCGCGTGGA
GGTGGAAGTCGACGCCGCCGGCGATGTATGGATCGGTGGCGCAACGCAGCAAGTGATCGAAGGCCGCATCGCTTGGTAA

Upstream 100 bases:

>100_bases
TCACAGCCGCGCTGCCAGGCACCATCGCGCCCATGCACCCCGCGCGGCTGCAGCCATCGCTGTCTGCACGCACTGTCCTT
TCACCGTAACGGCCGCCCTG

Downstream 100 bases:

>100_bases
GCTGCCGCGCCCTGCTCGCGGACCCGCTCCCATGACCACGCGTCGATTCCTGCAACTGGATGTGTTCTCGGCCCGCCCCG
GCAGCGGCAACCCGTTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MRTFRYLQLDVFSNRPGAGNPLGVVVDAGALSAQQMQQIAAWLNLSETVFFLPVSAPGADYHIRIFTPRAELPFAGHPSV
GAAWVARTHGLVGYRQDNRLYQQCAAGVLPVDVFDRHDVVLVRLRAPRAQCSDTGTHHAAALAQVTRAFAMSAQAPALWN
NGPSWWLLELADEAAVRTAVPDLAAIAALTAASGAVGLAIYAAAASDAEDLVVRAFCPGDGIPEDPVTGSANACIAARLL
AEDRLPGRQGRYVASQGREVGRDGRVEVEVDAAGDVWIGGATQQVIEGRIAW

Sequences:

>Translated_292_residues
MRTFRYLQLDVFSNRPGAGNPLGVVVDAGALSAQQMQQIAAWLNLSETVFFLPVSAPGADYHIRIFTPRAELPFAGHPSV
GAAWVARTHGLVGYRQDNRLYQQCAAGVLPVDVFDRHDVVLVRLRAPRAQCSDTGTHHAAALAQVTRAFAMSAQAPALWN
NGPSWWLLELADEAAVRTAVPDLAAIAALTAASGAVGLAIYAAAASDAEDLVVRAFCPGDGIPEDPVTGSANACIAARLL
AEDRLPGRQGRYVASQGREVGRDGRVEVEVDAAGDVWIGGATQQVIEGRIAW
>Mature_292_residues
MRTFRYLQLDVFSNRPGAGNPLGVVVDAGALSAQQMQQIAAWLNLSETVFFLPVSAPGADYHIRIFTPRAELPFAGHPSV
GAAWVARTHGLVGYRQDNRLYQQCAAGVLPVDVFDRHDVVLVRLRAPRAQCSDTGTHHAAALAQVTRAFAMSAQAPALWN
NGPSWWLLELADEAAVRTAVPDLAAIAALTAASGAVGLAIYAAAASDAEDLVVRAFCPGDGIPEDPVTGSANACIAARLL
AEDRLPGRQGRYVASQGREVGRDGRVEVEVDAAGDVWIGGATQQVIEGRIAW

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=270, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6321818, Length=300, Percent_Identity=31.6666666666667, Blast_Score=148, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 30927; Mature: 30927

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTFRYLQLDVFSNRPGAGNPLGVVVDAGALSAQQMQQIAAWLNLSETVFFLPVSAPGAD
CCCEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC
YHIRIFTPRAELPFAGHPSVGAAWVARTHGLVGYRQDNRLYQQCAAGVLPVDVFDRHDVV
EEEEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEECCCCCEE
LVRLRAPRAQCSDTGTHHAAALAQVTRAFAMSAQAPALWNNGPSWWLLELADEAAVRTAV
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHC
PDLAAIAALTAASGAVGLAIYAAAASDAEDLVVRAFCPGDGIPEDPVTGSANACIAARLL
CHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
AEDRLPGRQGRYVASQGREVGRDGRVEVEVDAAGDVWIGGATQQVIEGRIAW
HHHCCCCCCCCEEHHCCHHCCCCCCEEEEEECCCCEEECCCHHHHHCCCCCC
>Mature Secondary Structure
MRTFRYLQLDVFSNRPGAGNPLGVVVDAGALSAQQMQQIAAWLNLSETVFFLPVSAPGAD
CCCEEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCC
YHIRIFTPRAELPFAGHPSVGAAWVARTHGLVGYRQDNRLYQQCAAGVLPVDVFDRHDVV
EEEEEEECCCCCCCCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHCCCCEEEECCCCCEE
LVRLRAPRAQCSDTGTHHAAALAQVTRAFAMSAQAPALWNNGPSWWLLELADEAAVRTAV
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHC
PDLAAIAALTAASGAVGLAIYAAAASDAEDLVVRAFCPGDGIPEDPVTGSANACIAARLL
CHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
AEDRLPGRQGRYVASQGREVGRDGRVEVEVDAAGDVWIGGATQQVIEGRIAW
HHHCCCCCCCCEEHHCCHHCCCCCCEEEEEECCCCEEECCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]