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The map label for this gene is bfrD [H]

Identifier: 66767668

GI number: 66767668

Start: 1626576

End: 1628894

Strand: Reverse

Name: bfrD [H]

Synonym: XC_1341

Alternate gene names: 66767668

Gene position: 1628894-1626576 (Counterclockwise)

Preceding gene: 66767669

Following gene: 66767667

Centisome position: 31.64

GC content: 64.98

Gene sequence:

>2319_bases
ATGACTCCCAGGATTTCCCCGCTCACTTCGGCCGTGTTGCTGACGCTGTCCGCTCCTGCCTTCGCCCAGCCTGGCGACGC
GCCGGCACCTCCGGGCGCAGTGGATCTGGATGCGATCCGGGTGCAGCAGGAGCGTGCGCAGAAGCCGTCCTCGCCCAAGT
ACACCGAGGCGCTGCGCGACACCCCGCAGACCATCACCGTGGTCACCAAGCAGACCATGGACCAGCAGAACCTGCTGTCG
CTGCGTGATGTGCTCAGCACCCTGCCCGGCATCACCTTTGGTGCAGGCGAAGGCGGCGGCGGGTATGGCGACAGCATCAA
CCTGCGCGGCTTTACCGCCAGCAGCGACATCACCACCGACGGCGTGCGCGACAGCGCGCAGTACAGCCGCAGCGACACCT
TCAACCTGGAAGCGGTGGAGCTGATCAACGGCGCCAACTCGGCAATGTCCGGCGCAGGCTCGGTCGGTGGCAACATCAAC
CTGGTGACCAAGACCGCCGGCCAAGGCGACTTCACCAACGTGCTGATCGGCGGCGGCAGCGACCGCTACGGCCGCCTCAC
CGTCGACAGCAACTACGACTTCGAAAACGGCACCGCGGTGCGCTTGAACACCATGGGTCATACCCAGGACGTGCCGGGCC
GCGATGAGGAATTCCGTCATCGCTGGGGCTTTGCGCCGTCGGTGGCGTTCGGGCTGGGCTCGGACACGCGCTTCACGCTG
AGCTACCTGCACCAGCACGACAACAACCTGCCGCAGTACGGCGTGCCGTTCGCGCTCAGCCCGTTCAACGATGGCCCGCT
GCCGGGCGTGGACCGCGAAACCTATTACGGCTATCGCAATGTGTCGCGTCAGGAGATCGACGTGGACATGCTGACCGGCG
TGCTGGAAATGGACTTCGACGACAACGTCAAACTGCGCAGCCTGGCGCGTGTGCAGCGCGTGGACCAGACCACCACGGCC
ACCGCGCCGGAAGGCACCTGGTGCCTGCCCAACAACACCAACGCCTACACCGGCCGCGCCTGCGTCGGCCAGCCGCCGTC
CACCTGGAACCCGAACAGCGGCCCGCGCGGGCTGGTGCGCGAGACCGAAAACTTCATCGCCCACAGCCAGACCGACCTGA
CCGCCACCCTGCACACCGGCGCCATCGAGCACCGCGTGGTCGCCGGCGTGGCCTTCAGCAAGGAAGATTTCGAACTCGAT
AGCGGCAGCATCTTCCGCAATGCCGACGGCTCCACCACCGGCATCACCTACCCGCTGCAGACCTTCGACAACCCGTACAA
CATCTGGACCGGCCCGCAGAACTATTTCCGCACCGGACGCAGCAAGGGCAGCCTGACCAATCAGGCGGTGTACCTGTTCG
ACACGCTGCAGTTCAACGAGCAATGGATGCTCAACCTGGGCGGCCGTTACGAACACAACGAAGGCGACAGCACCACCTAC
ACCGTCAATGCCACCGGCGGCGTGACCGGCGTGACTCCGGGGTTCCCGGCAGGCAGCGAAGAGGATCTGTTCTCCTACCG
CGCCGGCCTGGTATTCAAGCCGGTCGACAACGCCAGCCTGTATCTGTCCTACGCCAACAGCAAGACCCCGTCCAAGGCGT
CGGTCAATGGCTCGTGCACGCCGATCGCCACTGCCACCGTCGGCGCCAACTGCAATGTGGAGCCGGAAAGCGCGGTCAAT
ATCGAACTCGGCGGTAAGTGGGACGTGTTGAACGAGCGTCTGGCACTGACGGCGGCGGTGTTCCGCAACGAGCGCGAGAA
CTACAAGGTCAACAGCGGCGACCCGCTGATTCCCGAGCAGGTGCTCGACGGCAAGGCGCGCGTGGATGGCATTGCGCTGG
GCGCGGCCGGCTACCTGACCGAGCGTTGGTCGGTCTTCGCCAACTACACTTTCCTGGACAGCGAAGTGCTGCAGAGCGTT
TCCAACCGCACTGCCAGCCTCACCGGCGACCCGATTGCCGGACGCGAACTGGTGCAGACCCCGCGCAACGCCGGCAATCT
CTGGACCACGTATCAGCTCAACGAGTGGACGTTCGGGTACGGCGTCAATTACCAGGGCAGCTTCTATCCGAACAACACCT
CGACCGCGGTCTACCGCAAGACCGACGCGTACTGGGTGCACCGCGCGATGGTCGGCCTGCGCGTCAACGACTGGCTCAGC
CTGCAGTTGAACGTCAACAACCTGTTCGACAAGGAGTACTACACCAGCATCCGCAACAACCTCACCGTCAACGCCGCGGG
CACCGTCACCGCCGGCAGCGGCTGGGCGTTGCCGGGTGATGGCCGCTCGGCGGTATTGAACGCGACCTTCAGCTTCTGA

Upstream 100 bases:

>100_bases
CTGGCAGCAGGCGGCATCGGGCTGACAGGCGCGCATTCCCTTCCCGCATCCGCCGAGCCATCGCCAGGCCGAAGCATCGC
TTCCCTTTTCGAGACGTCCC

Downstream 100 bases:

>100_bases
TTCATCAACGCGCCGTCCGCAGTCCGCGGACGGCGTGGAGACCACTGCATGTTGTTGCCCATTCCCGACGTCCTGACGCC
CGCCCAGCTGAGCCAGCTGA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 772; Mature: 771

Protein sequence:

>772_residues
MTPRISPLTSAVLLTLSAPAFAQPGDAPAPPGAVDLDAIRVQQERAQKPSSPKYTEALRDTPQTITVVTKQTMDQQNLLS
LRDVLSTLPGITFGAGEGGGGYGDSINLRGFTASSDITTDGVRDSAQYSRSDTFNLEAVELINGANSAMSGAGSVGGNIN
LVTKTAGQGDFTNVLIGGGSDRYGRLTVDSNYDFENGTAVRLNTMGHTQDVPGRDEEFRHRWGFAPSVAFGLGSDTRFTL
SYLHQHDNNLPQYGVPFALSPFNDGPLPGVDRETYYGYRNVSRQEIDVDMLTGVLEMDFDDNVKLRSLARVQRVDQTTTA
TAPEGTWCLPNNTNAYTGRACVGQPPSTWNPNSGPRGLVRETENFIAHSQTDLTATLHTGAIEHRVVAGVAFSKEDFELD
SGSIFRNADGSTTGITYPLQTFDNPYNIWTGPQNYFRTGRSKGSLTNQAVYLFDTLQFNEQWMLNLGGRYEHNEGDSTTY
TVNATGGVTGVTPGFPAGSEEDLFSYRAGLVFKPVDNASLYLSYANSKTPSKASVNGSCTPIATATVGANCNVEPESAVN
IELGGKWDVLNERLALTAAVFRNERENYKVNSGDPLIPEQVLDGKARVDGIALGAAGYLTERWSVFANYTFLDSEVLQSV
SNRTASLTGDPIAGRELVQTPRNAGNLWTTYQLNEWTFGYGVNYQGSFYPNNTSTAVYRKTDAYWVHRAMVGLRVNDWLS
LQLNVNNLFDKEYYTSIRNNLTVNAAGTVTAGSGWALPGDGRSAVLNATFSF

Sequences:

>Translated_772_residues
MTPRISPLTSAVLLTLSAPAFAQPGDAPAPPGAVDLDAIRVQQERAQKPSSPKYTEALRDTPQTITVVTKQTMDQQNLLS
LRDVLSTLPGITFGAGEGGGGYGDSINLRGFTASSDITTDGVRDSAQYSRSDTFNLEAVELINGANSAMSGAGSVGGNIN
LVTKTAGQGDFTNVLIGGGSDRYGRLTVDSNYDFENGTAVRLNTMGHTQDVPGRDEEFRHRWGFAPSVAFGLGSDTRFTL
SYLHQHDNNLPQYGVPFALSPFNDGPLPGVDRETYYGYRNVSRQEIDVDMLTGVLEMDFDDNVKLRSLARVQRVDQTTTA
TAPEGTWCLPNNTNAYTGRACVGQPPSTWNPNSGPRGLVRETENFIAHSQTDLTATLHTGAIEHRVVAGVAFSKEDFELD
SGSIFRNADGSTTGITYPLQTFDNPYNIWTGPQNYFRTGRSKGSLTNQAVYLFDTLQFNEQWMLNLGGRYEHNEGDSTTY
TVNATGGVTGVTPGFPAGSEEDLFSYRAGLVFKPVDNASLYLSYANSKTPSKASVNGSCTPIATATVGANCNVEPESAVN
IELGGKWDVLNERLALTAAVFRNERENYKVNSGDPLIPEQVLDGKARVDGIALGAAGYLTERWSVFANYTFLDSEVLQSV
SNRTASLTGDPIAGRELVQTPRNAGNLWTTYQLNEWTFGYGVNYQGSFYPNNTSTAVYRKTDAYWVHRAMVGLRVNDWLS
LQLNVNNLFDKEYYTSIRNNLTVNAAGTVTAGSGWALPGDGRSAVLNATFSF
>Mature_771_residues
TPRISPLTSAVLLTLSAPAFAQPGDAPAPPGAVDLDAIRVQQERAQKPSSPKYTEALRDTPQTITVVTKQTMDQQNLLSL
RDVLSTLPGITFGAGEGGGGYGDSINLRGFTASSDITTDGVRDSAQYSRSDTFNLEAVELINGANSAMSGAGSVGGNINL
VTKTAGQGDFTNVLIGGGSDRYGRLTVDSNYDFENGTAVRLNTMGHTQDVPGRDEEFRHRWGFAPSVAFGLGSDTRFTLS
YLHQHDNNLPQYGVPFALSPFNDGPLPGVDRETYYGYRNVSRQEIDVDMLTGVLEMDFDDNVKLRSLARVQRVDQTTTAT
APEGTWCLPNNTNAYTGRACVGQPPSTWNPNSGPRGLVRETENFIAHSQTDLTATLHTGAIEHRVVAGVAFSKEDFELDS
GSIFRNADGSTTGITYPLQTFDNPYNIWTGPQNYFRTGRSKGSLTNQAVYLFDTLQFNEQWMLNLGGRYEHNEGDSTTYT
VNATGGVTGVTPGFPAGSEEDLFSYRAGLVFKPVDNASLYLSYANSKTPSKASVNGSCTPIATATVGANCNVEPESAVNI
ELGGKWDVLNERLALTAAVFRNERENYKVNSGDPLIPEQVLDGKARVDGIALGAAGYLTERWSVFANYTFLDSEVLQSVS
NRTASLTGDPIAGRELVQTPRNAGNLWTTYQLNEWTFGYGVNYQGSFYPNNTSTAVYRKTDAYWVHRAMVGLRVNDWLSL
QLNVNNLFDKEYYTSIRNNLTVNAAGTVTAGSGWALPGDGRSAVLNATFSF

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=758, Percent_Identity=32.1899736147757, Blast_Score=285, Evalue=6e-78,
Organism=Escherichia coli, GI1786344, Length=782, Percent_Identity=24.1687979539642, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1787344, Length=727, Percent_Identity=25.5845942228336, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 83631; Mature: 83500

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRISPLTSAVLLTLSAPAFAQPGDAPAPPGAVDLDAIRVQQERAQKPSSPKYTEALRD
CCCCCCHHHHEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHC
TPQTITVVTKQTMDQQNLLSLRDVLSTLPGITFGAGEGGGGYGDSINLRGFTASSDITTD
CCCEEEEEEHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCC
GVRDSAQYSRSDTFNLEAVELINGANSAMSGAGSVGGNINLVTKTAGQGDFTNVLIGGGS
CCCCCHHHCCCCCCCEEEEEEECCCCHHCCCCCCCCCCEEEEEEECCCCCCEEEEEECCC
DRYGRLTVDSNYDFENGTAVRLNTMGHTQDVPGRDEEFRHRWGFAPSVAFGLGSDTRFTL
CCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCHHH
SYLHQHDNNLPQYGVPFALSPFNDGPLPGVDRETYYGYRNVSRQEIDVDMLTGVLEMDFD
HHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCHHHCCHHHHHCEEEECCC
DNVKLRSLARVQRVDQTTTATAPEGTWCLPNNTNAYTGRACVGQPPSTWNPNSGPRGLVR
CCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEECCEECCCCCCCCCCCCCCCCHHH
ETENFIAHSQTDLTATLHTGAIEHRVVAGVAFSKEDFELDSGSIFRNADGSTTGITYPLQ
HHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEHH
TFDNPYNIWTGPQNYFRTGRSKGSLTNQAVYLFDTLQFNEQWMLNLGGRYEHNEGDSTTY
HCCCCCEECCCCHHHHHCCCCCCCCCCCEEEEEEEEECCCEEEEECCCEEECCCCCCEEE
TVNATGGVTGVTPGFPAGSEEDLFSYRAGLVFKPVDNASLYLSYANSKTPSKASVNGSCT
EEECCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
PIATATVGANCNVEPESAVNIELGGKWDVLNERLALTAAVFRNERENYKVNSGDPLIPEQ
EEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHH
VLDGKARVDGIALGAAGYLTERWSVFANYTFLDSEVLQSVSNRTASLTGDPIAGRELVQT
HHCCCCCCCEEEECCCHHHHHCEEEEEEEEEECHHHHHHHHCCCEECCCCCCCCHHHHHC
PRNAGNLWTTYQLNEWTFGYGVNYQGSFYPNNTSTAVYRKTDAYWVHRAMVGLRVNDWLS
CCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEEEEECCHHEEEHHHHEEEECCEEE
LQLNVNNLFDKEYYTSIRNNLTVNAAGTVTAGSGWALPGDGRSAVLNATFSF
EEEEHHHHHHHHHHHHHHCCEEEECCCEEECCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TPRISPLTSAVLLTLSAPAFAQPGDAPAPPGAVDLDAIRVQQERAQKPSSPKYTEALRD
CCCCCHHHHEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHC
TPQTITVVTKQTMDQQNLLSLRDVLSTLPGITFGAGEGGGGYGDSINLRGFTASSDITTD
CCCEEEEEEHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCC
GVRDSAQYSRSDTFNLEAVELINGANSAMSGAGSVGGNINLVTKTAGQGDFTNVLIGGGS
CCCCCHHHCCCCCCCEEEEEEECCCCHHCCCCCCCCCCEEEEEEECCCCCCEEEEEECCC
DRYGRLTVDSNYDFENGTAVRLNTMGHTQDVPGRDEEFRHRWGFAPSVAFGLGSDTRFTL
CCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCHHH
SYLHQHDNNLPQYGVPFALSPFNDGPLPGVDRETYYGYRNVSRQEIDVDMLTGVLEMDFD
HHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCHHHCCHHHHHCEEEECCC
DNVKLRSLARVQRVDQTTTATAPEGTWCLPNNTNAYTGRACVGQPPSTWNPNSGPRGLVR
CCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCEECCEECCCCCCCCCCCCCCCCHHH
ETENFIAHSQTDLTATLHTGAIEHRVVAGVAFSKEDFELDSGSIFRNADGSTTGITYPLQ
HHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEHH
TFDNPYNIWTGPQNYFRTGRSKGSLTNQAVYLFDTLQFNEQWMLNLGGRYEHNEGDSTTY
HCCCCCEECCCCHHHHHCCCCCCCCCCCEEEEEEEEECCCEEEEECCCEEECCCCCCEEE
TVNATGGVTGVTPGFPAGSEEDLFSYRAGLVFKPVDNASLYLSYANSKTPSKASVNGSCT
EEECCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
PIATATVGANCNVEPESAVNIELGGKWDVLNERLALTAAVFRNERENYKVNSGDPLIPEQ
EEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHH
VLDGKARVDGIALGAAGYLTERWSVFANYTFLDSEVLQSVSNRTASLTGDPIAGRELVQT
HHCCCCCCCEEEECCCHHHHHCEEEEEEEEEECHHHHHHHHCCCEECCCCCCCCHHHHHC
PRNAGNLWTTYQLNEWTFGYGVNYQGSFYPNNTSTAVYRKTDAYWVHRAMVGLRVNDWLS
CCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCEEEEEECCHHEEEHHHHEEEECCEEE
LQLNVNNLFDKEYYTSIRNNLTVNAAGTVTAGSGWALPGDGRSAVLNATFSF
EEEEHHHHHHHHHHHHHHCCEEEECCCEEECCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]