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The map label for this gene is ybeQ [H]

Identifier: 66767666

GI number: 66767666

Start: 1625090

End: 1625848

Strand: Reverse

Name: ybeQ [H]

Synonym: XC_1339

Alternate gene names: 66767666

Gene position: 1625848-1625090 (Counterclockwise)

Preceding gene: 66767667

Following gene: 66767665

Centisome position: 31.58

GC content: 71.01

Gene sequence:

>759_bases
ATGTCTGAGCCGGTGCTGGACACCGCGCAGGTGATCGCCGCACTGCGCACGCAGCCCGCGCAGGCGGTGGCGTTGCTACG
CAAGGCGGCCGATCGCCAGGATGTGGCCGCACAGCTTCTGCTCGCACAACTCTACGCAGAAGGCCGCGGCGTCGCGGCCG
ATCCGATCCAGGCGATGCTGTGGTACGAAGTGGCCGCCAATGCAGGGCACCCGGAAGCGATGAACCAGCTCGGGCGCTGC
CACGAACTGGGCTTCGGCACGCCCTGCAATCTGGAGCTGGCGGCGCTGTGGTTTCGCCGCGCCGCCGCGCATGGCCTGGA
CTGGGGCATGTACAACCTGGCCCACCTGTACGCCTCCGGCCGCGGCGTCGCGCAGGACCACACCCAGGCGTTGGCGCTGT
ATCGCCGCGCTGCCGAACACGGGCACGCCAAGTCGATGAATTTCGTGGCGCGCTATCTGGAGCAAGGCCTGGCCGGCGCT
GCAGATCCGCACGCCGCCCGCGCCTGGTACCGCCGCTCCGCCGAGGCCGGCGATTTCCGCGGGCAAGCCGGTTTTGCGAC
GGTGCTGGCCGACGACGGCGACATCGATCAGGCCGAAGTCTGGATGCGCCGCGCCATCGCTGGCGGGCATGCCGGGTTCC
TGCGCCAACTCACCCCGCTGCTGGCCGCCGCTCCACAACCCCGCCTGCGCGCATTGCTGAGCGAAGTGCGTGCGCGGCAG
TCGCCTGCGCCGCCCGCCACCTCCACGGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
TTGGACGTGTCGATCCGTCGTTTGACCCAGGACACGCCCGGGCATCCGTCGCTGATCCAGCTCACCGGCGTGTATCACAA
CCTGCTGCGGCAATGGGCCG

Downstream 100 bases:

>100_bases
CCCACATGGCGCCCGCCTCCTCCACCGATCAGCTCGGCGCCGCGCAACAACGGCGCGGCTTCTGGCTGCGCATGCTGCAT
CAATGGCACTGGATCAGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSEPVLDTAQVIAALRTQPAQAVALLRKAADRQDVAAQLLLAQLYAEGRGVAADPIQAMLWYEVAANAGHPEAMNQLGRC
HELGFGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASGRGVAQDHTQALALYRRAAEHGHAKSMNFVARYLEQGLAGA
ADPHAARAWYRRSAEAGDFRGQAGFATVLADDGDIDQAEVWMRRAIAGGHAGFLRQLTPLLAAAPQPRLRALLSEVRARQ
SPAPPATSTAAA

Sequences:

>Translated_252_residues
MSEPVLDTAQVIAALRTQPAQAVALLRKAADRQDVAAQLLLAQLYAEGRGVAADPIQAMLWYEVAANAGHPEAMNQLGRC
HELGFGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASGRGVAQDHTQALALYRRAAEHGHAKSMNFVARYLEQGLAGA
ADPHAARAWYRRSAEAGDFRGQAGFATVLADDGDIDQAEVWMRRAIAGGHAGFLRQLTPLLAAAPQPRLRALLSEVRARQ
SPAPPATSTAAA
>Mature_251_residues
SEPVLDTAQVIAALRTQPAQAVALLRKAADRQDVAAQLLLAQLYAEGRGVAADPIQAMLWYEVAANAGHPEAMNQLGRCH
ELGFGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASGRGVAQDHTQALALYRRAAEHGHAKSMNFVARYLEQGLAGAA
DPHAARAWYRRSAEAGDFRGQAGFATVLADDGDIDQAEVWMRRAIAGGHAGFLRQLTPLLAAAPQPRLRALLSEVRARQS
PAPPATSTAAA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=196, Percent_Identity=33.6734693877551, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 26989; Mature: 26858

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPVLDTAQVIAALRTQPAQAVALLRKAADRQDVAAQLLLAQLYAEGRGVAADPIQAML
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
WYEVAANAGHPEAMNQLGRCHELGFGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASG
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
RGVAQDHTQALALYRRAAEHGHAKSMNFVARYLEQGLAGAADPHAARAWYRRSAEAGDFR
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
GQAGFATVLADDGDIDQAEVWMRRAIAGGHAGFLRQLTPLLAAAPQPRLRALLSEVRARQ
CCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
SPAPPATSTAAA
CCCCCCCCCCCC
>Mature Secondary Structure 
SEPVLDTAQVIAALRTQPAQAVALLRKAADRQDVAAQLLLAQLYAEGRGVAADPIQAML
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
WYEVAANAGHPEAMNQLGRCHELGFGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASG
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
RGVAQDHTQALALYRRAAEHGHAKSMNFVARYLEQGLAGAADPHAARAWYRRSAEAGDFR
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
GQAGFATVLADDGDIDQAEVWMRRAIAGGHAGFLRQLTPLLAAAPQPRLRALLSEVRARQ
CCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
SPAPPATSTAAA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]