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The map label for this gene is 66767658

Identifier: 66767658

GI number: 66767658

Start: 1616903

End: 1618396

Strand: Reverse

Name: 66767658

Synonym: XC_1331

Alternate gene names: NA

Gene position: 1618396-1616903 (Counterclockwise)

Preceding gene: 66767661

Following gene: 66767657

Centisome position: 31.43

GC content: 67.07

Gene sequence:

>1494_bases
ATGGATAGCGCCAAGATCGACCAATTCGCCAGCGACACGTGGGATCGCGAGATCGTCCCGCAACTGGTCGATTACATCCG
CATCCCCAACAAGTCGCCGATGTTCGATGCCGACTGGGTCGCGCATGGCTATATGGAACAGGCCGTCACCCTGATGGAAA
CCTGGGCACGCGCCCAGGCCATCGACGGCATGCAGGTCGAGGTGGTGCGCCTGGAAGGCCGCACGCCGTTGATCTTCATC
GAGATCCCGGCCACCGGGTCGGAGTCGGGCGAGGACACCGTGCTGCTGTACGGCCACCTGGACAAGCAGCCGGAAATGAC
CGGCTGGGATGCCGATCTCGGCCCCTGGGAGCCGGTGCTGCGCGACGACAAACTGTATGGGCGCGGCGGCGCGGACGATG
GCTACGCGATCTTCGGCTCGCTGGCTGCGGTGATGGCGCTGCGTGCACAAGGCCTGCCGCATGCGCGCTGCGTGGTGCTG
ATCGAAGCCTGCGAGGAATCCGGTAGCTACGACCTGCCCGCCTATGTGGACCACCTGGCCGAGCGCATTGGCAAGCCGTC
GCTGGTGGTGTGCCTGGATTCGGGTTGCGGCAACTACGAGCAGCTGTGGTGCACGACTTCGTTGCGTGGCCTGACCGGCG
GCAACCTGACCGTGAAGGTGCTGGAGGAAGGCGTGCACTCGGGCGACGCGTCCGGCGTGGTGCCGTCCAGCTTCCGCCTG
CTGCGCCAGCTGCTGTCGCGGATCGAGGACGAAACCAGCGGACGCATCCTGCTCGATGGCCTGCACGTGGACGTGCCCGC
CGAGCGACTGGCACAGGCCCGCAGTGCGGCGGCAACGCTGGACACGGCCATCTTCGACAAGTTTCCGATGGTGGACGGGC
TGGTGCCGATGCACGAGGACCTCACCGAGCTGGTGTTGAACCGGACCTGGCGCCCGGCCTTGTCGGTCACGGGTGTGGAT
GGCATGCCGCCGCTGGCCTCGGCCGGCAACGTGCTGCGTCCGCAGACCGCGGTGAAGCTGTCGCTGCGCCTGCCGCCCAC
TGCTGACGGCAAGGCCTGCGGCGAGCTGCTCAAGCAGGCCTTGCTGCGCGACCCACCGAACGGCGCGCAGGTCACGCTGG
AACTGGAAAAGGCCTCCTCCGGCTGGAGCGCGCCGGGCATGGCGCCGTGGCTGGAGAAAGCCATCGACGACGCCAGCCGC
GCCTTCTTCGACAAGCCGGCGATGTACATGGGCGAAGGCGGCTCGATCCCGTTCATGGGCATGCTGGGCGAGAAATTCCC
CGGTGCGCAGTTCATGATCACCGGCGTGCTCGGCCCGCATTCCAATGCGCATGGCCCGAACGAATTCCTGCACATCCCGA
TGGGCAAGCGCGTCACCGCCTGCGTTTCCAAGGTGATCACCGAGCACCACGCCGCCTGCCTGCGTGGCGAGACCAGCGGC
TCGCCGGTGGCAGCGGACAGCGGCACCCGACATGGTGGACATGGCTGCTGCTGA

Upstream 100 bases:

>100_bases
TTTTCACACAGCCGGTGAACTGCGCGGTGCCTTGTAGGGAAATCCCTACCCCCTGGCTGCGGCGTAGAATGTGCCATTAC
GTCACGCATTCGGAGCCCGT

Downstream 100 bases:

>100_bases
GGCAGCGCACTGCGACGATCGGCCGGCCTGGCGCACTGCGGGCCGGCCGGCTGTCTTGACCGCACGGCTGCAAGCGCTCC
GTGCAACCACCCCGCGTCGA

Product: succinyl-diaminopimelate desuccinylase

Products: NA

Alternate protein names: Peptidase; M20/M25/M40 Family Peptidase; Succinyl-Diaminopimelate Desuccinylase; Peptidase Family; ArgE/DapE/Acy1 Family Protein; M20 Family Peptidase; Peptidase Dimerization Domain Protein; Zinc Metallopeptidase; N-Acyl-L-Amino Acid Amidohydrolase; Peptidase Dimerisation Domain-Containing Protein; Deacylase; Peptidase Or Deacetlylase Family Protein; Acetylornithine Deacetylase ArgE; Beta-Ala-His Dipeptidase; Metallopeptidase; Thiol Dipeptidase; Peptidase Dimerisation Domain Protein

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MDSAKIDQFASDTWDREIVPQLVDYIRIPNKSPMFDADWVAHGYMEQAVTLMETWARAQAIDGMQVEVVRLEGRTPLIFI
EIPATGSESGEDTVLLYGHLDKQPEMTGWDADLGPWEPVLRDDKLYGRGGADDGYAIFGSLAAVMALRAQGLPHARCVVL
IEACEESGSYDLPAYVDHLAERIGKPSLVVCLDSGCGNYEQLWCTTSLRGLTGGNLTVKVLEEGVHSGDASGVVPSSFRL
LRQLLSRIEDETSGRILLDGLHVDVPAERLAQARSAAATLDTAIFDKFPMVDGLVPMHEDLTELVLNRTWRPALSVTGVD
GMPPLASAGNVLRPQTAVKLSLRLPPTADGKACGELLKQALLRDPPNGAQVTLELEKASSGWSAPGMAPWLEKAIDDASR
AFFDKPAMYMGEGGSIPFMGMLGEKFPGAQFMITGVLGPHSNAHGPNEFLHIPMGKRVTACVSKVITEHHAACLRGETSG
SPVAADSGTRHGGHGCC

Sequences:

>Translated_497_residues
MDSAKIDQFASDTWDREIVPQLVDYIRIPNKSPMFDADWVAHGYMEQAVTLMETWARAQAIDGMQVEVVRLEGRTPLIFI
EIPATGSESGEDTVLLYGHLDKQPEMTGWDADLGPWEPVLRDDKLYGRGGADDGYAIFGSLAAVMALRAQGLPHARCVVL
IEACEESGSYDLPAYVDHLAERIGKPSLVVCLDSGCGNYEQLWCTTSLRGLTGGNLTVKVLEEGVHSGDASGVVPSSFRL
LRQLLSRIEDETSGRILLDGLHVDVPAERLAQARSAAATLDTAIFDKFPMVDGLVPMHEDLTELVLNRTWRPALSVTGVD
GMPPLASAGNVLRPQTAVKLSLRLPPTADGKACGELLKQALLRDPPNGAQVTLELEKASSGWSAPGMAPWLEKAIDDASR
AFFDKPAMYMGEGGSIPFMGMLGEKFPGAQFMITGVLGPHSNAHGPNEFLHIPMGKRVTACVSKVITEHHAACLRGETSG
SPVAADSGTRHGGHGCC
>Mature_497_residues
MDSAKIDQFASDTWDREIVPQLVDYIRIPNKSPMFDADWVAHGYMEQAVTLMETWARAQAIDGMQVEVVRLEGRTPLIFI
EIPATGSESGEDTVLLYGHLDKQPEMTGWDADLGPWEPVLRDDKLYGRGGADDGYAIFGSLAAVMALRAQGLPHARCVVL
IEACEESGSYDLPAYVDHLAERIGKPSLVVCLDSGCGNYEQLWCTTSLRGLTGGNLTVKVLEEGVHSGDASGVVPSSFRL
LRQLLSRIEDETSGRILLDGLHVDVPAERLAQARSAAATLDTAIFDKFPMVDGLVPMHEDLTELVLNRTWRPALSVTGVD
GMPPLASAGNVLRPQTAVKLSLRLPPTADGKACGELLKQALLRDPPNGAQVTLELEKASSGWSAPGMAPWLEKAIDDASR
AFFDKPAMYMGEGGSIPFMGMLGEKFPGAQFMITGVLGPHSNAHGPNEFLHIPMGKRVTACVSKVITEHHAACLRGETSG
SPVAADSGTRHGGHGCC

Specific function: Unknown

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI271398239, Length=393, Percent_Identity=27.2264631043257, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI21071039, Length=417, Percent_Identity=27.5779376498801, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17563146, Length=300, Percent_Identity=29, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI193211059, Length=420, Percent_Identity=25.4761904761905, Blast_Score=90, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6321159, Length=398, Percent_Identity=27.6381909547739, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6319758, Length=410, Percent_Identity=23.4146341463415, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24585880, Length=393, Percent_Identity=30.7888040712468, Blast_Score=106, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53407; Mature: 53407

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSAKIDQFASDTWDREIVPQLVDYIRIPNKSPMFDADWVAHGYMEQAVTLMETWARAQA
CCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IDGMQVEVVRLEGRTPLIFIEIPATGSESGEDTVLLYGHLDKQPEMTGWDADLGPWEPVL
CCCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHH
RDDKLYGRGGADDGYAIFGSLAAVMALRAQGLPHARCVVLIEACEESGSYDLPAYVDHLA
CCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEEHHHCCCCCCCHHHHHHHH
ERIGKPSLVVCLDSGCGNYEQLWCTTSLRGLTGGNLTVKVLEEGVHSGDASGVVPSSFRL
HHHCCCEEEEEECCCCCCHHHEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCCHHHHHH
LRQLLSRIEDETSGRILLDGLHVDVPAERLAQARSAAATLDTAIFDKFPMVDGLVPMHED
HHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LTELVLNRTWRPALSVTGVDGMPPLASAGNVLRPQTAVKLSLRLPPTADGKACGELLKQA
HHHHHHCCCCCCCEEECCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH
LLRDPPNGAQVTLELEKASSGWSAPGMAPWLEKAIDDASRAFFDKPAMYMGEGGSIPFMG
HHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHH
MLGEKFPGAQFMITGVLGPHSNAHGPNEFLHIPMGKRVTACVSKVITEHHAACLRGETSG
HCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
SPVAADSGTRHGGHGCC
CCEECCCCCCCCCCCCC
>Mature Secondary Structure
MDSAKIDQFASDTWDREIVPQLVDYIRIPNKSPMFDADWVAHGYMEQAVTLMETWARAQA
CCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IDGMQVEVVRLEGRTPLIFIEIPATGSESGEDTVLLYGHLDKQPEMTGWDADLGPWEPVL
CCCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHH
RDDKLYGRGGADDGYAIFGSLAAVMALRAQGLPHARCVVLIEACEESGSYDLPAYVDHLA
CCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEEHHHCCCCCCCHHHHHHHH
ERIGKPSLVVCLDSGCGNYEQLWCTTSLRGLTGGNLTVKVLEEGVHSGDASGVVPSSFRL
HHHCCCEEEEEECCCCCCHHHEEEECCCCCCCCCCEEEEEEHHHCCCCCCCCCCHHHHHH
LRQLLSRIEDETSGRILLDGLHVDVPAERLAQARSAAATLDTAIFDKFPMVDGLVPMHED
HHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
LTELVLNRTWRPALSVTGVDGMPPLASAGNVLRPQTAVKLSLRLPPTADGKACGELLKQA
HHHHHHCCCCCCCEEECCCCCCCCHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHH
LLRDPPNGAQVTLELEKASSGWSAPGMAPWLEKAIDDASRAFFDKPAMYMGEGGSIPFMG
HHCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHH
MLGEKFPGAQFMITGVLGPHSNAHGPNEFLHIPMGKRVTACVSKVITEHHAACLRGETSG
HCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
SPVAADSGTRHGGHGCC
CCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA