| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is cysJ [H]
Identifier: 66767661
GI number: 66767661
Start: 1620152
End: 1621756
Strand: Reverse
Name: cysJ [H]
Synonym: XC_1334
Alternate gene names: 66767661
Gene position: 1621756-1620152 (Counterclockwise)
Preceding gene: 66767662
Following gene: 66767658
Centisome position: 31.5
GC content: 68.35
Gene sequence:
>1605_bases ATGAGCCTCGCCTCCCCACGCGTGTGGCTTGGCAACGGCGTCATCCTGCTGGCCTTGGCGGTACTGGCCGCCTGGTTGGG CAGCCTGCATGCGGGCCCGTGGTGGAGCGCCCCCGCCCCACACCGTTGGCAATGGGCGGGCCTCAGCCTGGCGGCTTACG CCATCGTCTGTTTCGGCCTGTGGCTGCGCGGGCGTCCACGCGTTGCGGCTGCGCGCGGCGATGACAGCAACCTGCTGATC GCCTGGGCGAGCCAGACCGGGTTCGCGCGTGAATTGGCCGAACGCAGCGCCACTGCCCTGCAGCAGGCCGGCGTCGGTGC GCATGCATTGCCGCTGGACGCGTTGGATGCCAATCAACTATCGCGCGTGCCGCGCCTGCTCTGCATCGTCAGCACCACCG GCGAAGGCGATGCACCCGATCACGTACAAGCAGCCGAGCGCACCTGGCTCGCCGGCAGCGATACCGATCTGGCCGCGCTG CGTTACGCGGTCGTGGCGCTGGGCGACCGCCGTTACGCGCAGTTCTGCGCATTTGGGCGGCGCCTGGATGCACGCTTGCA GGCGCAAGGTGCAACCCCCTTGTTCGCACGCATCGAGGTCGACAACGCCGAGCCGCAGTCCCTGCAGCAGTGGCAGCAAA GGCTGGCTGAACTGGCACCGGCACTGGCGACGCAAGCGGATTGGAGTGTGCCCAGTTATGCCGACTGGCAGCTGCAGCAG CGCGTGCATATCAATCCGGGCAGCGCGGGCGCCGCGGTGTATCGCTTGCGCCTGATCCCGTGCGGCGGTCATTTGCCGCA GTGGAGCGCGGGCGACATTGCCGAAATCCGCCCGCAGCATTCGCCACAAGTGGTGGAGACCTGGCTGCAGCGGCATCTGC TGGACGGCACCCAACAGGTGCAGGGGCGTTCGTTGCACGCCTGGCTCAGCGGCGCGACCCTGCCTGACGACAGCCCCGAC ATCACTTCGCTGGATGCATGGGTACACACGCTGGCAGCGCTGCCACACCGCGACTACTCGCTGGCCTCGCTCCCCGACGA AGGCCATGCCGAACTGCTGATCCGTCAACACCTGCATGCCGATGGCACGCCCGGCCTGGGAAGCGGCTGGCTTTGCCGGG CGGCTCCAATCGGCGCGCGCATCGCGCTACGCGTGCGGACCAATCCCGGCTTCCACCCGCCCGCCGCCGCGCAACCGATG CTGCTGATCGGCAATGGCACCGGGATCGCCGGCTTGCGTGCACACCTGCGCGCGCGCATCGCCGCCGGTGCGCGCCGCAA CTGGCTGTTGTTCGGCGAACGCAACGCAGCCTACGACACGCTCTATGGCGATGAACTCGAACACTGGCAGCGCGACGGCT GGATCGAACGACTGGACCGCGTCTATTCCCGCGACAGTAGCCAGCCGCATCGCTACGTTCAACACGCCTTGGCCGCCGCG GCGGCGGACGTGCGCGCATGGGTGGCGCAAGGCGCCTGCGTGTACGTCTGCGGCAGCCTGCGCGGCATGGCCCCGGAGGT CGATGCCACCCTCGACAGCATTCTGGGAACCGACCTCAAACACGCACTACTCAGCAGCGGGCGGTATCGTCGCGACGTGT ACTGA
Upstream 100 bases:
>100_bases ATGCGACGAACGCAGGGCTTGCGGTGCGCTTTTTGCAGCGCCGCGGCGCGGATTTGCAGGAATCCATGAGCCCGGCGTTT GAAACGCATCTGGCTGCCGC
Downstream 100 bases:
>100_bases TGGTCGTTATTGCAAGCGAAACTCCACTGCTGTGAACGGATATGTTGCGCTTCACTTGTTAGCCGCAGTGCAGCGGCTTG CATGGATCTGCACATGCAAC
Product: sulfite reductase
Products: NA
Alternate protein names: SiR-FP [H]
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MSLASPRVWLGNGVILLALAVLAAWLGSLHAGPWWSAPAPHRWQWAGLSLAAYAIVCFGLWLRGRPRVAAARGDDSNLLI AWASQTGFARELAERSATALQQAGVGAHALPLDALDANQLSRVPRLLCIVSTTGEGDAPDHVQAAERTWLAGSDTDLAAL RYAVVALGDRRYAQFCAFGRRLDARLQAQGATPLFARIEVDNAEPQSLQQWQQRLAELAPALATQADWSVPSYADWQLQQ RVHINPGSAGAAVYRLRLIPCGGHLPQWSAGDIAEIRPQHSPQVVETWLQRHLLDGTQQVQGRSLHAWLSGATLPDDSPD ITSLDAWVHTLAALPHRDYSLASLPDEGHAELLIRQHLHADGTPGLGSGWLCRAAPIGARIALRVRTNPGFHPPAAAQPM LLIGNGTGIAGLRAHLRARIAAGARRNWLLFGERNAAYDTLYGDELEHWQRDGWIERLDRVYSRDSSQPHRYVQHALAAA AADVRAWVAQGACVYVCGSLRGMAPEVDATLDSILGTDLKHALLSSGRYRRDVY
Sequences:
>Translated_534_residues MSLASPRVWLGNGVILLALAVLAAWLGSLHAGPWWSAPAPHRWQWAGLSLAAYAIVCFGLWLRGRPRVAAARGDDSNLLI AWASQTGFARELAERSATALQQAGVGAHALPLDALDANQLSRVPRLLCIVSTTGEGDAPDHVQAAERTWLAGSDTDLAAL RYAVVALGDRRYAQFCAFGRRLDARLQAQGATPLFARIEVDNAEPQSLQQWQQRLAELAPALATQADWSVPSYADWQLQQ RVHINPGSAGAAVYRLRLIPCGGHLPQWSAGDIAEIRPQHSPQVVETWLQRHLLDGTQQVQGRSLHAWLSGATLPDDSPD ITSLDAWVHTLAALPHRDYSLASLPDEGHAELLIRQHLHADGTPGLGSGWLCRAAPIGARIALRVRTNPGFHPPAAAQPM LLIGNGTGIAGLRAHLRARIAAGARRNWLLFGERNAAYDTLYGDELEHWQRDGWIERLDRVYSRDSSQPHRYVQHALAAA AADVRAWVAQGACVYVCGSLRGMAPEVDATLDSILGTDLKHALLSSGRYRRDVY >Mature_533_residues SLASPRVWLGNGVILLALAVLAAWLGSLHAGPWWSAPAPHRWQWAGLSLAAYAIVCFGLWLRGRPRVAAARGDDSNLLIA WASQTGFARELAERSATALQQAGVGAHALPLDALDANQLSRVPRLLCIVSTTGEGDAPDHVQAAERTWLAGSDTDLAALR YAVVALGDRRYAQFCAFGRRLDARLQAQGATPLFARIEVDNAEPQSLQQWQQRLAELAPALATQADWSVPSYADWQLQQR VHINPGSAGAAVYRLRLIPCGGHLPQWSAGDIAEIRPQHSPQVVETWLQRHLLDGTQQVQGRSLHAWLSGATLPDDSPDI TSLDAWVHTLAALPHRDYSLASLPDEGHAELLIRQHLHADGTPGLGSGWLCRAAPIGARIALRVRTNPGFHPPAAAQPML LIGNGTGIAGLRAHLRARIAAGARRNWLLFGERNAAYDTLYGDELEHWQRDGWIERLDRVYSRDSSQPHRYVQHALAAAA ADVRAWVAQGACVYVCGSLRGMAPEVDATLDSILGTDLKHALLSSGRYRRDVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Homo sapiens, GI127139033, Length=237, Percent_Identity=28.6919831223629, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI10835173, Length=225, Percent_Identity=30.2222222222222, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI40254422, Length=225, Percent_Identity=30.2222222222222, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI24041029, Length=231, Percent_Identity=30.7359307359307, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1789123, Length=540, Percent_Identity=26.1111111111111, Blast_Score=138, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17566446, Length=200, Percent_Identity=30.5, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17554134, Length=193, Percent_Identity=29.0155440414508, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321832, Length=177, Percent_Identity=31.0734463276836, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1 [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 58077; Mature: 57946
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLASPRVWLGNGVILLALAVLAAWLGSLHAGPWWSAPAPHRWQWAGLSLAAYAIVCFGL CCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHH WLRGRPRVAAARGDDSNLLIAWASQTGFARELAERSATALQQAGVGAHALPLDALDANQL HHCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH SRVPRLLCIVSTTGEGDAPDHVQAAERTWLAGSDTDLAALRYAVVALGDRRYAQFCAFGR HHCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH RLDARLQAQGATPLFARIEVDNAEPQSLQQWQQRLAELAPALATQADWSVPSYADWQLQQ HHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE RVHINPGSAGAAVYRLRLIPCGGHLPQWSAGDIAEIRPQHSPQVVETWLQRHLLDGTQQV EEEECCCCCCCEEEEEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCHHHH QGRSLHAWLSGATLPDDSPDITSLDAWVHTLAALPHRDYSLASLPDEGHAELLIRQHLHA CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC DGTPGLGSGWLCRAAPIGARIALRVRTNPGFHPPAAAQPMLLIGNGTGIAGLRAHLRARI CCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH AAGARRNWLLFGERNAAYDTLYGDELEHWQRDGWIERLDRVYSRDSSQPHRYVQHALAAA HCCCCCCEEEEECCCCCHHHHCCHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHH AADVRAWVAQGACVYVCGSLRGMAPEVDATLDSILGTDLKHALLSSGRYRRDVY HHHHHHHHHCCCCEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLASPRVWLGNGVILLALAVLAAWLGSLHAGPWWSAPAPHRWQWAGLSLAAYAIVCFGL CCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHH WLRGRPRVAAARGDDSNLLIAWASQTGFARELAERSATALQQAGVGAHALPLDALDANQL HHCCCCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH SRVPRLLCIVSTTGEGDAPDHVQAAERTWLAGSDTDLAALRYAVVALGDRRYAQFCAFGR HHCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH RLDARLQAQGATPLFARIEVDNAEPQSLQQWQQRLAELAPALATQADWSVPSYADWQLQQ HHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE RVHINPGSAGAAVYRLRLIPCGGHLPQWSAGDIAEIRPQHSPQVVETWLQRHLLDGTQQV EEEECCCCCCCEEEEEEEEECCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCHHHH QGRSLHAWLSGATLPDDSPDITSLDAWVHTLAALPHRDYSLASLPDEGHAELLIRQHLHA CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC DGTPGLGSGWLCRAAPIGARIALRVRTNPGFHPPAAAQPMLLIGNGTGIAGLRAHLRARI CCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH AAGARRNWLLFGERNAAYDTLYGDELEHWQRDGWIERLDRVYSRDSSQPHRYVQHALAAA HCCCCCCEEEEECCCCCHHHHCCHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHH AADVRAWVAQGACVYVCGSLRGMAPEVDATLDSILGTDLKHALLSSGRYRRDVY HHHHHHHHHCCCCEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]