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The map label for this gene is yhbH [C]

Identifier: 66767637

GI number: 66767637

Start: 1600242

End: 1600559

Strand: Reverse

Name: yhbH [C]

Synonym: XC_1310

Alternate gene names: 66767637

Gene position: 1600559-1600242 (Counterclockwise)

Preceding gene: 66767638

Following gene: 66767636

Centisome position: 31.09

GC content: 63.52

Gene sequence:

>318_bases
ATGCGTATCGAGACGTATGGCCACCAGCTTGAAGTGACCCCCGCCCTGCGGGACTACGTGGCAAGCAAGCTGCAGCGCCT
GCAGCGCCACTTCGACCAGCACTGTGAAGTCCGAACCCAGCTGGCCGTCCGCAAGCCAGACCACCATGTGGTCGCCACCG
TCAACCTCCCCGGCCGCACTCTGCACGCCGATGCCAGCGGTTCCACCATGTCCGCCGCCATCGACCTGTTGGTCGACAAG
CTCGACCGCCTGGTGCTCAAGCACAAAGAGAAGAAATGTAACCACCACGCCCGCGAGGTGCGCGACAATCCCGCATGA

Upstream 100 bases:

>100_bases
GCGCATCGCCTGACGTTGCAACCACCGCAACGCCGGCCTATGCCGGGTTCGCCGGACCACCGGAAAGGTTCATTGGCCCA
CCGACCAATGGAGGTATCCG

Downstream 100 bases:

>100_bases
CGCTTCTCGCTTGATGCCCTCATGCCTTTAACCGATCTGATGGCGGCCGTGCGCACCATGGTGTCGCCGGCCGCCGATCG
CGACACCGTCCTGCATACCG

Product: sigma-54 modulation protein

Products: NA

Alternate protein names: ORF107 [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MRIETYGHQLEVTPALRDYVASKLQRLQRHFDQHCEVRTQLAVRKPDHHVVATVNLPGRTLHADASGSTMSAAIDLLVDK
LDRLVLKHKEKKCNHHAREVRDNPA

Sequences:

>Translated_105_residues
MRIETYGHQLEVTPALRDYVASKLQRLQRHFDQHCEVRTQLAVRKPDHHVVATVNLPGRTLHADASGSTMSAAIDLLVDK
LDRLVLKHKEKKCNHHAREVRDNPA
>Mature_105_residues
MRIETYGHQLEVTPALRDYVASKLQRLQRHFDQHCEVRTQLAVRKPDHHVVATVNLPGRTLHADASGSTMSAAIDLLVDK
LDRLVLKHKEKKCNHHAREVRDNPA

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=95, Percent_Identity=41.0526315789474, Blast_Score=76, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 12004; Mature: 12004

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIETYGHQLEVTPALRDYVASKLQRLQRHFDQHCEVRTQLAVRKPDHHVVATVNLPGRT
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCE
LHADASGSTMSAAIDLLVDKLDRLVLKHKEKKCNHHAREVRDNPA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIETYGHQLEVTPALRDYVASKLQRLQRHFDQHCEVRTQLAVRKPDHHVVATVNLPGRT
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCE
LHADASGSTMSAAIDLLVDKLDRLVLKHKEKKCNHHAREVRDNPA
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2695747; 3481423 [H]