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The map label for this gene is ycdJ [C]

Identifier: 66767581

GI number: 66767581

Start: 1534838

End: 1535833

Strand: Reverse

Name: ycdJ [C]

Synonym: XC_1254

Alternate gene names: 66767581

Gene position: 1535833-1534838 (Counterclockwise)

Preceding gene: 66767582

Following gene: 77761142

Centisome position: 29.83

GC content: 62.15

Gene sequence:

>996_bases
ATGCGACACCTTGCCTGCTCTCTCGCCTTGGCGCTGGCCTGTGGCCCGCTGATGGCCCAGGAGGCCAGTTACGGCCCCCG
CCTGGAAGGCTTTGATTACCCCTATCCAGTGAAAACCTACGCGTTTACGTCGCAACAGCAGGCGCTGGAGATGGCGTACC
TGGATGTTGCGCCGACGGGCAAAGCCAACGGGCGCACCGCCGTGCTGCTGCACGGCAAGAACTTCTGCGCCGCCACCTGG
GAGCAAACCATCGCCGCACTGAGCAAGGCCGGCTACCGCGTGATCGCGCCGGACCAGGTGGGCTTTTGCAAATCCAGCAA
ACCGGCCGCGTATCAGTTCTCGTTCGCACAGCTCGCCGACAACACGCATGCCCTGCTGCAGAAGCTCGGTCTCCAGCGCG
CCGTGGTGGTTGGGCACTCGATGGGCGGCATGCTCGCGATCCGCTATGCACTGATGTACCCGCAAGCGACCGAGCACCTC
GCGCTGGTCGACCCGATCGGGCTGGAAGACTGGAAGGCCGAAGGCATTCCGTGGCGCAGCGTGGATGCTTGGTACGACAA
CGAACTGAAGATCAGCTTCGAGCGCATCAAGAAGTACCAGATGGACGTGTACTACGCTGGCCAATGGAAGCCGGAATTCG
AGCGCTGGGCGCGCATGCAGGCCGGTATGTCACTGGGCAACGGCAAACAGGCCGTGGCGTGGAATCAGGCGCTGACCTAC
GACATGGTGTTCAATCAGCCGGTGGTTTACGAGCTGCCCAGGCTCGCCGTGCCAACCACACTGTTTATCGGGCTTAAGGA
TCGCACTGCCATCGGCAAAGACACCGCACCGCCAGAGGTGAAGGCGCGCGTGGGCGATTACACCAAGCTGGGCAAACGCG
CCGCCGAGGCCATTCCTAATGCCACGTTGGTCGAATTCGCCGACCTGGGACATTCGCCACAGGTGCAGGATCCGGTGCGT
TTCAATGCCGAATTGTTGAAGGCGATTTCCCGCTAG

Upstream 100 bases:

>100_bases
CGCAAGCGTTGAGTGGCGCTCAGTAGCGGCCGCCACGTGCTGTACGCGCTCACCACAGCGCGCTGTGTAGCCTTGCGGCA
TTGCTCACCTGGAGATCGCG

Downstream 100 bases:

>100_bases
CGAGTTGCAGCGCGCAGGTTCTGACATGCGCGCCGCCAGCCAGCTCCAGGCGCGATCGCCACGCCCCTAACACCGATTGG
GAACACGTGGTTTCGCGCGC

Product: hydrolase

Products: NA

Alternate protein names: Chloride peroxidase [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MRHLACSLALALACGPLMAQEASYGPRLEGFDYPYPVKTYAFTSQQQALEMAYLDVAPTGKANGRTAVLLHGKNFCAATW
EQTIAALSKAGYRVIAPDQVGFCKSSKPAAYQFSFAQLADNTHALLQKLGLQRAVVVGHSMGGMLAIRYALMYPQATEHL
ALVDPIGLEDWKAEGIPWRSVDAWYDNELKISFERIKKYQMDVYYAGQWKPEFERWARMQAGMSLGNGKQAVAWNQALTY
DMVFNQPVVYELPRLAVPTTLFIGLKDRTAIGKDTAPPEVKARVGDYTKLGKRAAEAIPNATLVEFADLGHSPQVQDPVR
FNAELLKAISR

Sequences:

>Translated_331_residues
MRHLACSLALALACGPLMAQEASYGPRLEGFDYPYPVKTYAFTSQQQALEMAYLDVAPTGKANGRTAVLLHGKNFCAATW
EQTIAALSKAGYRVIAPDQVGFCKSSKPAAYQFSFAQLADNTHALLQKLGLQRAVVVGHSMGGMLAIRYALMYPQATEHL
ALVDPIGLEDWKAEGIPWRSVDAWYDNELKISFERIKKYQMDVYYAGQWKPEFERWARMQAGMSLGNGKQAVAWNQALTY
DMVFNQPVVYELPRLAVPTTLFIGLKDRTAIGKDTAPPEVKARVGDYTKLGKRAAEAIPNATLVEFADLGHSPQVQDPVR
FNAELLKAISR
>Mature_331_residues
MRHLACSLALALACGPLMAQEASYGPRLEGFDYPYPVKTYAFTSQQQALEMAYLDVAPTGKANGRTAVLLHGKNFCAATW
EQTIAALSKAGYRVIAPDQVGFCKSSKPAAYQFSFAQLADNTHALLQKLGLQRAVVVGHSMGGMLAIRYALMYPQATEHL
ALVDPIGLEDWKAEGIPWRSVDAWYDNELKISFERIKKYQMDVYYAGQWKPEFERWARMQAGMSLGNGKQAVAWNQALTY
DMVFNQPVVYELPRLAVPTTLFIGLKDRTAIGKDTAPPEVKARVGDYTKLGKRAAEAIPNATLVEFADLGHSPQVQDPVR
FNAELLKAISR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial non-heme bromo- and chloro- peroxidases family [H]

Homologues:

Organism=Homo sapiens, GI27597073, Length=144, Percent_Identity=31.25, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24586387, Length=120, Percent_Identity=30.8333333333333, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24586391, Length=120, Percent_Identity=30.8333333333333, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24586389, Length=120, Percent_Identity=30.8333333333333, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24586385, Length=120, Percent_Identity=30.8333333333333, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =1.11.1.10 [H]

Molecular weight: Translated: 36642; Mature: 36642

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLACSLALALACGPLMAQEASYGPRLEGFDYPYPVKTYAFTSQQQALEMAYLDVAPTG
CCHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHEEECCCCC
KANGRTAVLLHGKNFCAATWEQTIAALSKAGYRVIAPDQVGFCKSSKPAAYQFSFAQLAD
CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEHHHHHCC
NTHALLQKLGLQRAVVVGHSMGGMLAIRYALMYPQATEHLALVDPIGLEDWKAEGIPWRS
CHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC
VDAWYDNELKISFERIKKYQMDVYYAGQWKPEFERWARMQAGMSLGNGKQAVAWNQALTY
CCCCCCCCEEEEHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEE
DMVFNQPVVYELPRLAVPTTLFIGLKDRTAIGKDTAPPEVKARVGDYTKLGKRAAEAIPN
EEHCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCC
ATLVEFADLGHSPQVQDPVRFNAELLKAISR
CHHHHHHHCCCCCCCCCCHHHCHHHHHHHCC
>Mature Secondary Structure
MRHLACSLALALACGPLMAQEASYGPRLEGFDYPYPVKTYAFTSQQQALEMAYLDVAPTG
CCHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHEEECCCCC
KANGRTAVLLHGKNFCAATWEQTIAALSKAGYRVIAPDQVGFCKSSKPAAYQFSFAQLAD
CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEHHHHHCC
NTHALLQKLGLQRAVVVGHSMGGMLAIRYALMYPQATEHLALVDPIGLEDWKAEGIPWRS
CHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC
VDAWYDNELKISFERIKKYQMDVYYAGQWKPEFERWARMQAGMSLGNGKQAVAWNQALTY
CCCCCCCCEEEEHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEECCCEEE
DMVFNQPVVYELPRLAVPTTLFIGLKDRTAIGKDTAPPEVKARVGDYTKLGKRAAEAIPN
EEHCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCC
ATLVEFADLGHSPQVQDPVRFNAELLKAISR
CHHHHHHHCCCCCCCCCCHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]