Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 77761142

GI number: 77761142

Start: 1530009

End: 1530899

Strand: Reverse

Name: yebA [C]

Synonym: XC_1250

Alternate gene names: 77761142

Gene position: 1530899-1530009 (Counterclockwise)

Preceding gene: 66767581

Following gene: 66767576

Centisome position: 29.73

GC content: 72.28

Gene sequence:

>891_bases
ATGCTTCGTGCCGCCGTTTCCGCCGTCATCCTGCTGTTGTGCATCCCCGCGGCACCGGTCGCCGCGCAGCAGCGCTGGCA
TTGGCCCGGCGCAGCGGCAGTGGGCGCAACGCCACCTGCAAGTGCGTCGCAACGCGCCGAAACCGCCGCCGCGCCGGGCC
CGGCCCTGCAGCTCGAATGGCAGGCACCGGTGTATCTGGCCTGGGCCGTCAATCCGCTGGACGGACCGGCCGAAGTGCGC
CTGAGCGCACCGCCCAGCGCCGACTACCGCGCCGTGCCGCAGCTTCCGTTGGTGCAGTCGCTGGGCGCGCGCGAACGGCG
CCTGCTGGCCCGCGTGTATCCGGTCAGCCAGCGCAGGACACTGGACGGGCTCGGCCTGCGGCTGGAGGTGGTGCCCGGCG
ACCCGCAGGCGCAACTGCAGGAAGCGCGCTACCAGCTGCCGTTCCGCGACGTGCCGATCCAGGTGGACCAGGGCTATGGC
GGCCAGTACAGCCACAGCGACGATCCCAACTGGTATGCCATCGACTTCGCCCTACCCGCCAATACCCCGGTGCTGGCTGC
CCGCGACGGCGTGGTCATGGAAATCCAGCAAGGCGCCGAGGAGGCCGGCCCGCATGGGCCGGACGCCGGCGGCGGCAACC
TGGTGCGCCTGCTGCACGCCGACGGCAGCATGGCCATCTACGCCCATCTGGCTCCGGCGGGCGTGCTGGTGCACCCCGGC
CAGCGCGTGCGCAGCGGCGAGCGGCTCGGCAGCGCCGGCAGCACCGGCTTCAGCACCGCGCCGCACCTGCATTTCGCGGT
GCAACGCAATGTCGGCCTGCGGCTGATCTCGCTGCCATTCCGGATGAGCGGCCCACAAGGCGAGCTGCACTTCCCCTCGC
CCGCGCCCTGA

Upstream 100 bases:

>100_bases
CATGCGGATGGAAAGATATATTTTCATCCGATACCACCTGGCCGTGATGGACCGCATACTTGCGCCCCTCTCGCCCGACC
TCGACTGCAGTCGCTCGCCC

Downstream 100 bases:

>100_bases
CGCGTGCCGCCAGCGCCAGCCAGGCGCCCTGGGCTACCGCTGGCCGGCGCACCGAAGCCGCTATAATCACCGGCTTCCTC
AGTTTCCACAGGCGTCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Staphylolytic enzyme ALE-1 [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MLRAAVSAVILLLCIPAAPVAAQQRWHWPGAAAVGATPPASASQRAETAAAPGPALQLEWQAPVYLAWAVNPLDGPAEVR
LSAPPSADYRAVPQLPLVQSLGARERRLLARVYPVSQRRTLDGLGLRLEVVPGDPQAQLQEARYQLPFRDVPIQVDQGYG
GQYSHSDDPNWYAIDFALPANTPVLAARDGVVMEIQQGAEEAGPHGPDAGGGNLVRLLHADGSMAIYAHLAPAGVLVHPG
QRVRSGERLGSAGSTGFSTAPHLHFAVQRNVGLRLISLPFRMSGPQGELHFPSPAP

Sequences:

>Translated_296_residues
MLRAAVSAVILLLCIPAAPVAAQQRWHWPGAAAVGATPPASASQRAETAAAPGPALQLEWQAPVYLAWAVNPLDGPAEVR
LSAPPSADYRAVPQLPLVQSLGARERRLLARVYPVSQRRTLDGLGLRLEVVPGDPQAQLQEARYQLPFRDVPIQVDQGYG
GQYSHSDDPNWYAIDFALPANTPVLAARDGVVMEIQQGAEEAGPHGPDAGGGNLVRLLHADGSMAIYAHLAPAGVLVHPG
QRVRSGERLGSAGSTGFSTAPHLHFAVQRNVGLRLISLPFRMSGPQGELHFPSPAP
>Mature_296_residues
MLRAAVSAVILLLCIPAAPVAAQQRWHWPGAAAVGATPPASASQRAETAAAPGPALQLEWQAPVYLAWAVNPLDGPAEVR
LSAPPSADYRAVPQLPLVQSLGARERRLLARVYPVSQRRTLDGLGLRLEVVPGDPQAQLQEARYQLPFRDVPIQVDQGYG
GQYSHSDDPNWYAIDFALPANTPVLAARDGVVMEIQQGAEEAGPHGPDAGGGNLVRLLHADGSMAIYAHLAPAGVLVHPG
QRVRSGERLGSAGSTGFSTAPHLHFAVQRNVGLRLISLPFRMSGPQGELHFPSPAP

Specific function: Lyses staphylococcal cells by hydrolyzing the polyglycine interpeptide bridges of the peptidoglycan [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=98, Percent_Identity=39.7959183673469, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR003646
- InterPro:   IPR013667 [H]

Pfam domain/function: PF01551 Peptidase_M23; PF08460 SH3_5 [H]

EC number: =3.4.24.75 [H]

Molecular weight: Translated: 31338; Mature: 31338

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAAVSAVILLLCIPAAPVAAQQRWHWPGAAAVGATPPASASQRAETAAAPGPALQLEW
CCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEE
QAPVYLAWAVNPLDGPAEVRLSAPPSADYRAVPQLPLVQSLGARERRLLARVYPVSQRRT
CCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC
LDGLGLRLEVVPGDPQAQLQEARYQLPFRDVPIQVDQGYGGQYSHSDDPNWYAIDFALPA
CCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCC
NTPVLAARDGVVMEIQQGAEEAGPHGPDAGGGNLVRLLHADGSMAIYAHLAPAGVLVHPG
CCCEEEECCCEEEEEHHCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCC
QRVRSGERLGSAGSTGFSTAPHLHFAVQRNVGLRLISLPFRMSGPQGELHFPSPAP
HHHCCCHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEECEEECCCCCCEECCCCCC
>Mature Secondary Structure
MLRAAVSAVILLLCIPAAPVAAQQRWHWPGAAAVGATPPASASQRAETAAAPGPALQLEW
CCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEE
QAPVYLAWAVNPLDGPAEVRLSAPPSADYRAVPQLPLVQSLGARERRLLARVYPVSQRRT
CCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC
LDGLGLRLEVVPGDPQAQLQEARYQLPFRDVPIQVDQGYGGQYSHSDDPNWYAIDFALPA
CCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCC
NTPVLAARDGVVMEIQQGAEEAGPHGPDAGGGNLVRLLHADGSMAIYAHLAPAGVLVHPG
CCCEEEECCCEEEEEHHCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEECCC
QRVRSGERLGSAGSTGFSTAPHLHFAVQRNVGLRLISLPFRMSGPQGELHFPSPAP
HHHCCCHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEECEEECCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9023202 [H]