| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is hslO [H]
Identifier: 66767570
GI number: 66767570
Start: 1522406
End: 1523296
Strand: Reverse
Name: hslO [H]
Synonym: XC_1243
Alternate gene names: 66767570
Gene position: 1523296-1522406 (Counterclockwise)
Preceding gene: 66767574
Following gene: 66767569
Centisome position: 29.59
GC content: 67.45
Gene sequence:
>891_bases ATGACCGATCACGATCAGCTTTCCCGTTTCCTGTTGCCTGCCGCCGGCGTGCGTGGCGTGCATGTGCGTCTGACCCAGGC CTGGCGCGACATCCAGGGCGCTGCCCACTACCCGCCATTTGCACGCCAGTTGCTTGGCGAAGCCGCAGTCGCGTCCGCGC TGTTCACCGGCCACACCAAGGTAGACGGCAGGCTGTCGGTGCAGTTGCGCGGCAATGACCGCCTACGCACGCTGTTTGCC GAATGCACCGCTGCCGGCACCTTGCGCGGCATCGTCCAGATCGCCGACGGTGCCGATGCGCCCACCGATCTGCGCGAGCT CGGCGACGACGCCCTGCTGGCCATCACCATCGAGAACCCCGGCCTGGACCCGCGCGAACCGCAGCGCTACCAGAGCCTGG TGGGCATGCAGGCGCCGGATCTGGCCGAAGCGTTCGAAACCTACTTCCTGCAGTCCGAGCAGCTGCCCACCCGCCTGCTG CTGGCCGCCGGGCCTGACCAGGCTGCGGGCCTGTTGCTGCAAAAGCTGCCCGGCGACGAAGGCGACACCGACGGCTGGAC CCGCGTCGGCGCCCTGTTCGACACCCTGGGCGCCCCGGAACTGCTTTCGGTCGCCGGCGAAGACCTGCTGCATCGTCTAT TCCATGAAGAAGCGCCCGAACTGGTGGGCAACAAGGCGCTAAGCTTCGGCTGTTCCTGCTCACGCGAGCGCGTCGCCGCA ATGCTGCAGTCGCTGGGCGAAGACGAAGCGCGCGCGGCGGCGGAGCCGACTGGGGAAGTCGAGGTGCGGTGCGAGTTCTG CGGGCGTGAGTATCACTTCCCGTTGACCGAGCTGGACGTACTTTTCAGCGAGGCGCAGCCATCGCAGGATGCGCCGGAAC GGTTGCAGTAG
Upstream 100 bases:
>100_bases GCTTGTCATCCAATCCGTCCGTCCCCATTGTTCGCTACGACCTTCATCCCGATGCCTGCCGCATTATCCGGCACTGGCGT CCCTTACGTCCGACGCTCCC
Downstream 100 bases:
>100_bases AGAGCATCTGGCAAGCGACGTTCTGGGGAGAGCGAGGACTTGTTAAATATTCATAAACACCCTAGCATCCTCACTGCCCG CTATCGGGAACTTAACACCT
Product: heat shock protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTDHDQLSRFLLPAAGVRGVHVRLTQAWRDIQGAAHYPPFARQLLGEAAVASALFTGHTKVDGRLSVQLRGNDRLRTLFA ECTAAGTLRGIVQIADGADAPTDLRELGDDALLAITIENPGLDPREPQRYQSLVGMQAPDLAEAFETYFLQSEQLPTRLL LAAGPDQAAGLLLQKLPGDEGDTDGWTRVGALFDTLGAPELLSVAGEDLLHRLFHEEAPELVGNKALSFGCSCSRERVAA MLQSLGEDEARAAAEPTGEVEVRCEFCGREYHFPLTELDVLFSEAQPSQDAPERLQ
Sequences:
>Translated_296_residues MTDHDQLSRFLLPAAGVRGVHVRLTQAWRDIQGAAHYPPFARQLLGEAAVASALFTGHTKVDGRLSVQLRGNDRLRTLFA ECTAAGTLRGIVQIADGADAPTDLRELGDDALLAITIENPGLDPREPQRYQSLVGMQAPDLAEAFETYFLQSEQLPTRLL LAAGPDQAAGLLLQKLPGDEGDTDGWTRVGALFDTLGAPELLSVAGEDLLHRLFHEEAPELVGNKALSFGCSCSRERVAA MLQSLGEDEARAAAEPTGEVEVRCEFCGREYHFPLTELDVLFSEAQPSQDAPERLQ >Mature_295_residues TDHDQLSRFLLPAAGVRGVHVRLTQAWRDIQGAAHYPPFARQLLGEAAVASALFTGHTKVDGRLSVQLRGNDRLRTLFAE CTAAGTLRGIVQIADGADAPTDLRELGDDALLAITIENPGLDPREPQRYQSLVGMQAPDLAEAFETYFLQSEQLPTRLLL AAGPDQAAGLLLQKLPGDEGDTDGWTRVGALFDTLGAPELLSVAGEDLLHRLFHEEAPELVGNKALSFGCSCSRERVAAM LQSLGEDEARAAAEPTGEVEVRCEFCGREYHFPLTELDVLFSEAQPSQDAPERLQ
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=292, Percent_Identity=32.1917808219178, Blast_Score=171, Evalue=8e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 32081; Mature: 31950
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHDQLSRFLLPAAGVRGVHVRLTQAWRDIQGAAHYPPFARQLLGEAAVASALFTGHTK CCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCE VDGRLSVQLRGNDRLRTLFAECTAAGTLRGIVQIADGADAPTDLRELGDDALLAITIENP ECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEEECCC GLDPREPQRYQSLVGMQAPDLAEAFETYFLQSEQLPTRLLLAAGPDQAAGLLLQKLPGDE CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCC GDTDGWTRVGALFDTLGAPELLSVAGEDLLHRLFHEEAPELVGNKALSFGCSCSRERVAA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHH MLQSLGEDEARAAAEPTGEVEVRCEFCGREYHFPLTELDVLFSEAQPSQDAPERLQ HHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHCC >Mature Secondary Structure TDHDQLSRFLLPAAGVRGVHVRLTQAWRDIQGAAHYPPFARQLLGEAAVASALFTGHTK CCHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCE VDGRLSVQLRGNDRLRTLFAECTAAGTLRGIVQIADGADAPTDLRELGDDALLAITIENP ECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEEECCC GLDPREPQRYQSLVGMQAPDLAEAFETYFLQSEQLPTRLLLAAGPDQAAGLLLQKLPGDE CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCC GDTDGWTRVGALFDTLGAPELLSVAGEDLLHRLFHEEAPELVGNKALSFGCSCSRERVAA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHH MLQSLGEDEARAAAEPTGEVEVRCEFCGREYHFPLTELDVLFSEAQPSQDAPERLQ HHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA