| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yhjG [H]
Identifier: 66767574
GI number: 66767574
Start: 1525562
End: 1527517
Strand: Reverse
Name: yhjG [H]
Synonym: XC_1247
Alternate gene names: 66767574
Gene position: 1527517-1525562 (Counterclockwise)
Preceding gene: 66767575
Following gene: 66767570
Centisome position: 29.67
GC content: 65.39
Gene sequence:
>1956_bases GTGACTACCCCGACAGCTTCCATCGCCGCCCGCCCTTCCCGCCAACCACGCCGACGCCGCTGGTTGATCGGCACCGGCAT CGTGCTGGCACTGATCGTGATCCTGGTGCTGGTGTTCGACTGGAACTGGTTGCGCGGCCCGGTGGAGCGCGCAGTCAGCG CCAAGACGGGGCGCGAATTCCACCTGGGCCATCTGGATGTGGATCTGGGCCGCATCGTCACCGTGCGCGGTGAGCAGCTG AGCCTGGGCAATGCTGCATGGTCCAAACGCGGCCCCATGGCGCAGATGCGCTCAGCCGAAATCGATGTCGAATTCTGGCC ATTGCTGCGCGGCAAGGTGCGCCTGCCGGAGATCCGGCTGGAGCACACCAAGGTGGTACTGGAAGCCGGCGACGATACCC ACCCCGGCAACTGGGTGTTCGAGACCAGCGGTGGCGATGGCACCCTGCCGCGATTGGGCCGGTTGCTGGTGCAGGACGGC CGGCTGCAGTACATCGATGCGGCCAACAAGTCTGACGTGGACGTCGCCATCAACAGCCTGGCACCACCGCGCAGCGATCA GCGCGCCGCGCCGATCGGCATCGACGGCAAGGGTCGCTGGAAGGCGTATCCCTTCACGCTCAAAGGCAATACCGCCTCGC CGCTGGAGCTGAGCCAGACCGAGCACCCGTTCCGGATCGACCTGCGCGGCAGTGCCGGGGCCACCCGCACCCACGTGCGC GGCACGCTGACCAATCCGTTTCAGTTCCAGGTGTTCGACCTGCAGATGGCATTGAGCGGCCAGGACATGGAGGACCTGTA TCCGCTAACCGGCGTGGCGATTCCCTCCACCCCGCCGTACACGCTGGATGGCCACCTGCGCCGCAACGGCGATATCTGGC GCTACGAAGATTTCACCGGCAAGGCCGGCGATAGCGATCTCTCAGGCACCGCCGAAGTGGATCTGCGCAACAAGCGCCCC TTCCTGCGCGCCGATCTGGCCTCCAAACGCCTGGATTTCGACGACCTCGCCGGGTTTGTCGGTGCACCGCCCAAGACCGG CGCCAACGAATCGGCTAACGCCGAGCAAAAGAAGCGGGCAGCGCAATTGGCCGCCGACACCCGCGTACTGCCCGACACGC CCTATGACCTGTCCAAATTGCGGGCGATGGATGCGCAGGTGCGCTGGCGCGCGCAGCGCATCAATACACCGTCATGGCCG CTGGACGACATGGATGCATCGCTGCGCTTGAAGGATGGATTGCTGCAGCTGGATCCACTCAATTTCGGCGTGGCGGGCGG CGATATCCGCTCCACCATCCGCATGGACGCACGCAACCCGGTGATTTCCACCCAGCTGCAGGCCGCGATTCGCGGTATCC GCCTGGACAAGCTGTTTCCCGATGCCACCCTGGCCAAGCAGGCGTCTGGCGCAATCGGTGGCGATCTGGATCTGAAAGGA CGTGGCAACTCGATCGCCGCCATGCTCGGTACCGCCGACGGCTCGATCGGTGTGGGCATGGGCCGCGGTCACGTGGGCAA CCTGATCATGGAACTGGCCGGCCTGGATATTGCCGAATCGCTGAAATACCTTGTCACCCGCGACCGGCAGATTCCGGTGC GCTGCATCTTCGGCGACTTCGGTGTGCGCGATGGCGTGATGCAATCGCGCGCGCTGGCCTTCGACAGCACCGACACCATC ATCATCGGCGAAGGAAGTATCAGTTTGAAGGACGAGCAGCTGGATCTGCTGCTGCGCCCGCGCCCGAAAGATCGCAGCAT CCTCAGTCTGCGCTCGCCGCTGCGGATCGGCGGGACCTTCAAGGACCCGTCGTTCCGCCCGGATTTCAAGGCGCTGGGCG TGCGTGGCGCCATCGCGGTTGCACTGGGCAGCATCGCCCCGCCCGCTGCCCTGCTGGCGACCTTCGAACCCGGGCCCGGC AAGGACAGCGATTGCGGCGGCAAGTACGCGCAGTAA
Upstream 100 bases:
>100_bases CGCCGGCAGCGCTTGCCACTTTGTGGCGGTGACCGCGCAAATCGTGTGACCGATGGCGCGTTCGCGCGCCGTGCACGAGG CTTCGCCAACCATGGGTCGG
Downstream 100 bases:
>100_bases CGCCTCGCCTCAGCTGGCGATGTAGCGCTGCAACTGGTCGATATCGTGTTGCTGCGCTTCGATCACCGCCTTGACCAGAT CGCCGATGGAAATCACGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 651; Mature: 650
Protein sequence:
>651_residues MTTPTASIAARPSRQPRRRRWLIGTGIVLALIVILVLVFDWNWLRGPVERAVSAKTGREFHLGHLDVDLGRIVTVRGEQL SLGNAAWSKRGPMAQMRSAEIDVEFWPLLRGKVRLPEIRLEHTKVVLEAGDDTHPGNWVFETSGGDGTLPRLGRLLVQDG RLQYIDAANKSDVDVAINSLAPPRSDQRAAPIGIDGKGRWKAYPFTLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVR GTLTNPFQFQVFDLQMALSGQDMEDLYPLTGVAIPSTPPYTLDGHLRRNGDIWRYEDFTGKAGDSDLSGTAEVDLRNKRP FLRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKRAAQLAADTRVLPDTPYDLSKLRAMDAQVRWRAQRINTPSWP LDDMDASLRLKDGLLQLDPLNFGVAGGDIRSTIRMDARNPVISTQLQAAIRGIRLDKLFPDATLAKQASGAIGGDLDLKG RGNSIAAMLGTADGSIGVGMGRGHVGNLIMELAGLDIAESLKYLVTRDRQIPVRCIFGDFGVRDGVMQSRALAFDSTDTI IIGEGSISLKDEQLDLLLRPRPKDRSILSLRSPLRIGGTFKDPSFRPDFKALGVRGAIAVALGSIAPPAALLATFEPGPG KDSDCGGKYAQ
Sequences:
>Translated_651_residues MTTPTASIAARPSRQPRRRRWLIGTGIVLALIVILVLVFDWNWLRGPVERAVSAKTGREFHLGHLDVDLGRIVTVRGEQL SLGNAAWSKRGPMAQMRSAEIDVEFWPLLRGKVRLPEIRLEHTKVVLEAGDDTHPGNWVFETSGGDGTLPRLGRLLVQDG RLQYIDAANKSDVDVAINSLAPPRSDQRAAPIGIDGKGRWKAYPFTLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVR GTLTNPFQFQVFDLQMALSGQDMEDLYPLTGVAIPSTPPYTLDGHLRRNGDIWRYEDFTGKAGDSDLSGTAEVDLRNKRP FLRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKRAAQLAADTRVLPDTPYDLSKLRAMDAQVRWRAQRINTPSWP LDDMDASLRLKDGLLQLDPLNFGVAGGDIRSTIRMDARNPVISTQLQAAIRGIRLDKLFPDATLAKQASGAIGGDLDLKG RGNSIAAMLGTADGSIGVGMGRGHVGNLIMELAGLDIAESLKYLVTRDRQIPVRCIFGDFGVRDGVMQSRALAFDSTDTI IIGEGSISLKDEQLDLLLRPRPKDRSILSLRSPLRIGGTFKDPSFRPDFKALGVRGAIAVALGSIAPPAALLATFEPGPG KDSDCGGKYAQ >Mature_650_residues TTPTASIAARPSRQPRRRRWLIGTGIVLALIVILVLVFDWNWLRGPVERAVSAKTGREFHLGHLDVDLGRIVTVRGEQLS LGNAAWSKRGPMAQMRSAEIDVEFWPLLRGKVRLPEIRLEHTKVVLEAGDDTHPGNWVFETSGGDGTLPRLGRLLVQDGR LQYIDAANKSDVDVAINSLAPPRSDQRAAPIGIDGKGRWKAYPFTLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVRG TLTNPFQFQVFDLQMALSGQDMEDLYPLTGVAIPSTPPYTLDGHLRRNGDIWRYEDFTGKAGDSDLSGTAEVDLRNKRPF LRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKRAAQLAADTRVLPDTPYDLSKLRAMDAQVRWRAQRINTPSWPL DDMDASLRLKDGLLQLDPLNFGVAGGDIRSTIRMDARNPVISTQLQAAIRGIRLDKLFPDATLAKQASGAIGGDLDLKGR GNSIAAMLGTADGSIGVGMGRGHVGNLIMELAGLDIAESLKYLVTRDRQIPVRCIFGDFGVRDGVMQSRALAFDSTDTII IGEGSISLKDEQLDLLLRPRPKDRSILSLRSPLRIGGTFKDPSFRPDFKALGVRGAIAVALGSIAPPAALLATFEPGPGK DSDCGGKYAQ
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=664, Percent_Identity=29.8192771084337, Blast_Score=284, Evalue=2e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 70757; Mature: 70625
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTASIAARPSRQPRRRRWLIGTGIVLALIVILVLVFDWNWLRGPVERAVSAKTGREF CCCCCCCCCCCCCCCCCHHEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEE HLGHLDVDLGRIVTVRGEQLSLGNAAWSKRGPMAQMRSAEIDVEFWPLLRGKVRLPEIRL EEEEEEECCCEEEEEECCEEECCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEECCCEEE EHTKVVLEAGDDTHPGNWVFETSGGDGTLPRLGRLLVQDGRLQYIDAANKSDVDVAINSL EEEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECC APPRSDQRAAPIGIDGKGRWKAYPFTLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVR CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE GTLTNPFQFQVFDLQMALSGQDMEDLYPLTGVAIPSTPPYTLDGHLRRNGDIWRYEDFTG EEECCCEEEEEEEEEEEECCCCHHHCCCCCCEECCCCCCEEECCCEECCCCEEEEECCCC KAGDSDLSGTAEVDLRNKRPFLRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKRA CCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH AQLAADTRVLPDTPYDLSKLRAMDAQVRWRAQRINTPSWPLDDMDASLRLKDGLLQLDPL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEECCC NFGVAGGDIRSTIRMDARNPVISTQLQAAIRGIRLDKLFPDATLAKQASGAIGGDLDLKG CCCCCCCCHHHEEEECCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCCCCCEEECC RGNSIAAMLGTADGSIGVGMGRGHVGNLIMELAGLDIAESLKYLVTRDRQIPVRCIFGDF CCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECC GVRDGVMQSRALAFDSTDTIIIGEGSISLKDEQLDLLLRPRPKDRSILSLRSPLRIGGTF CCCCHHHHHHEEEECCCCEEEEECCCCEEECCCEEEEECCCCCCCCCEECCCCCEECCCC KDPSFRPDFKALGVRGAIAVALGSIAPPAALLATFEPGPGKDSDCGGKYAQ CCCCCCCCHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TTPTASIAARPSRQPRRRRWLIGTGIVLALIVILVLVFDWNWLRGPVERAVSAKTGREF CCCCCCCCCCCCCCCCHHEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEE HLGHLDVDLGRIVTVRGEQLSLGNAAWSKRGPMAQMRSAEIDVEFWPLLRGKVRLPEIRL EEEEEEECCCEEEEEECCEEECCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEECCCEEE EHTKVVLEAGDDTHPGNWVFETSGGDGTLPRLGRLLVQDGRLQYIDAANKSDVDVAINSL EEEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECC APPRSDQRAAPIGIDGKGRWKAYPFTLKGNTASPLELSQTEHPFRIDLRGSAGATRTHVR CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE GTLTNPFQFQVFDLQMALSGQDMEDLYPLTGVAIPSTPPYTLDGHLRRNGDIWRYEDFTG EEECCCEEEEEEEEEEEECCCCHHHCCCCCCEECCCCCCEEECCCEECCCCEEEEECCCC KAGDSDLSGTAEVDLRNKRPFLRADLASKRLDFDDLAGFVGAPPKTGANESANAEQKKRA CCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH AQLAADTRVLPDTPYDLSKLRAMDAQVRWRAQRINTPSWPLDDMDASLRLKDGLLQLDPL HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEECCC NFGVAGGDIRSTIRMDARNPVISTQLQAAIRGIRLDKLFPDATLAKQASGAIGGDLDLKG CCCCCCCCHHHEEEECCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHCCCCCCCEEECC RGNSIAAMLGTADGSIGVGMGRGHVGNLIMELAGLDIAESLKYLVTRDRQIPVRCIFGDF CCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECC GVRDGVMQSRALAFDSTDTIIIGEGSISLKDEQLDLLLRPRPKDRSILSLRSPLRIGGTF CCCCHHHHHHEEEECCCCEEEEECCCCEEECCCEEEEECCCCCCCCCEECCCCCEECCCC KDPSFRPDFKALGVRGAIAVALGSIAPPAALLATFEPGPGKDSDCGGKYAQ CCCCCCCCHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]