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The map label for this gene is 66767543

Identifier: 66767543

GI number: 66767543

Start: 1480899

End: 1482416

Strand: Reverse

Name: 66767543

Synonym: XC_1216

Alternate gene names: NA

Gene position: 1482416-1480899 (Counterclockwise)

Preceding gene: 66767544

Following gene: 66767542

Centisome position: 28.79

GC content: 66.07

Gene sequence:

>1518_bases
ATGCGTAAGATCCCCACAGACAGCATCACTGAGCCAGCGCGCGACGACAGCACGCAACCCGCCACCGCCGCCGTCTCGCG
CCGCACGATGCTGGGCATGCTCGGCGCCGCCGCAGGCAGCGCGCTGATCGGTGGCATTCCCGGTGCGCGTGCGGCGACCT
CGTCAGCGGCATCACGCTTTGTCAGCAAGCGTCCGCCCAAGGCGCAGCGCCGCTTCGTCAGCACCGCGGTGGAGCAGCAG
ATCACCCAGATCAAGGCGCGCATTGCCGACCCGGAACTGGCCTGGCTGTTCGAGAACTGCTACCCCAACACGCTCGACAC
CACGGTGGAAACCGGCACCCGCAACGGCAAGCCGGACACCTTCGTCATCACCGGCGACATCCACGCGATGTGGCTGCGCG
ATTCGTCCGCGCAGGTGCATCCGTACGTGCCGCTGGCCAGGCGCGACCCCGCGCTGCGGCGCATGTTCCATGGTCTGATC
CAGCGCCAGGCCGCCTGCATCAAGCTCGATCCGTATGCCAACGCGTTCTTGCCCGATGGCCAGACCCAGCGCCTGAAGTG
GTCGCTCAACGACATCACCGAGATGAAGCCTGGTGTGGGCGAGCGCAAGTGGGAAATCGATTCGCTGTGCTACCCGATCC
GCATCGCGCACGAATACTGGCGTGCCACCGGCGACACCGCGCCGTTCGACGACGACTGGCGCGAGGCGATGCACGTGGTG
GTGCGCACCTTCCGCGAACAGCAGCGCAAGGACAACCGCGGCCCGTACGTGTTCCAGCGCCCCTCGCCGCTGGCCACCGA
GACGCTGGTGCTGGAAGGCTACGGCCAGCCGACCAAGCCCAACGGCATGATCCATTCGATGTTCCGCCCGTCCGACGATG
CCTGCGTATTCCCGTTGTTTGTGCCGGCCAACCTGTTTGCGGTGGCCTCGCTGCGGCAGCTGGCCAGCATGAGCACGCAG
ATCCATCGCGACAGTGCATTCGCGGCCGACTGCACGGCGCTGGCCGACGAAGTGGAAACCGCCACACGCCAGTTCGGGCA
GATGCGCGACAGCGATGGCCAGGCGTATTGGGCGTTTGAAGTGGACGGCTACGGCAATCAGTTGTTCATCGACGACGCCA
ACGCGCCCGGGCTGCTCAGCCTGGCGTACCTGGGCTGTTGCGATCGCGCCGACCCGGTGTTCCTGCGCACACGCCAGCTG
GCCTGGAGCGAGCGCAACCCGTACTTCTCGCGCGGCACCGCGGCCGAAGGCGTGGGCAGCCCGCATAGCGGCATGGGCAC
CATCTGGCCGATGGCGATCGTGCAGTATGCGTTGGTCAGCGACGACGACACGCAGCTACGCCAATGCCTGCAGTGGCTCA
AGACCACGCATGCCGGCACCGGCTTCATGCATGAGGCCTTCGACAAGGACAACCCGGCCACATTCACGCGTGACTGGTTC
GCCTGGGCCAACACCTTGTTCGGCGAACTCATCATCGACCTGCATCAGCGCAAACCGCAGCTGCTGCGCAGTAGTTGA

Upstream 100 bases:

>100_bases
GCTGCCGAAGTAAGGCCATTCGCAGCGTGCCGGCGCAGTGCCGGCATGCGCGTCATGAACACCACGCGCTCGCAGCCCGG
GCGCGGCATCAGGAGTATCC

Downstream 100 bases:

>100_bases
TTGTCCGAAGCGCTAGATCTTCCTTTCCAGGCGGAACGACACCGCACTTGATCTTCCCTTCTCCCGCCGGGCGAAGGTGC
CCGAAGGGCGGATGAGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MRKIPTDSITEPARDDSTQPATAAVSRRTMLGMLGAAAGSALIGGIPGARAATSSAASRFVSKRPPKAQRRFVSTAVEQQ
ITQIKARIADPELAWLFENCYPNTLDTTVETGTRNGKPDTFVITGDIHAMWLRDSSAQVHPYVPLARRDPALRRMFHGLI
QRQAACIKLDPYANAFLPDGQTQRLKWSLNDITEMKPGVGERKWEIDSLCYPIRIAHEYWRATGDTAPFDDDWREAMHVV
VRTFREQQRKDNRGPYVFQRPSPLATETLVLEGYGQPTKPNGMIHSMFRPSDDACVFPLFVPANLFAVASLRQLASMSTQ
IHRDSAFAADCTALADEVETATRQFGQMRDSDGQAYWAFEVDGYGNQLFIDDANAPGLLSLAYLGCCDRADPVFLRTRQL
AWSERNPYFSRGTAAEGVGSPHSGMGTIWPMAIVQYALVSDDDTQLRQCLQWLKTTHAGTGFMHEAFDKDNPATFTRDWF
AWANTLFGELIIDLHQRKPQLLRSS

Sequences:

>Translated_505_residues
MRKIPTDSITEPARDDSTQPATAAVSRRTMLGMLGAAAGSALIGGIPGARAATSSAASRFVSKRPPKAQRRFVSTAVEQQ
ITQIKARIADPELAWLFENCYPNTLDTTVETGTRNGKPDTFVITGDIHAMWLRDSSAQVHPYVPLARRDPALRRMFHGLI
QRQAACIKLDPYANAFLPDGQTQRLKWSLNDITEMKPGVGERKWEIDSLCYPIRIAHEYWRATGDTAPFDDDWREAMHVV
VRTFREQQRKDNRGPYVFQRPSPLATETLVLEGYGQPTKPNGMIHSMFRPSDDACVFPLFVPANLFAVASLRQLASMSTQ
IHRDSAFAADCTALADEVETATRQFGQMRDSDGQAYWAFEVDGYGNQLFIDDANAPGLLSLAYLGCCDRADPVFLRTRQL
AWSERNPYFSRGTAAEGVGSPHSGMGTIWPMAIVQYALVSDDDTQLRQCLQWLKTTHAGTGFMHEAFDKDNPATFTRDWF
AWANTLFGELIIDLHQRKPQLLRSS
>Mature_505_residues
MRKIPTDSITEPARDDSTQPATAAVSRRTMLGMLGAAAGSALIGGIPGARAATSSAASRFVSKRPPKAQRRFVSTAVEQQ
ITQIKARIADPELAWLFENCYPNTLDTTVETGTRNGKPDTFVITGDIHAMWLRDSSAQVHPYVPLARRDPALRRMFHGLI
QRQAACIKLDPYANAFLPDGQTQRLKWSLNDITEMKPGVGERKWEIDSLCYPIRIAHEYWRATGDTAPFDDDWREAMHVV
VRTFREQQRKDNRGPYVFQRPSPLATETLVLEGYGQPTKPNGMIHSMFRPSDDACVFPLFVPANLFAVASLRQLASMSTQ
IHRDSAFAADCTALADEVETATRQFGQMRDSDGQAYWAFEVDGYGNQLFIDDANAPGLLSLAYLGCCDRADPVFLRTRQL
AWSERNPYFSRGTAAEGVGSPHSGMGTIWPMAIVQYALVSDDDTQLRQCLQWLKTTHAGTGFMHEAFDKDNPATFTRDWF
AWANTLFGELIIDLHQRKPQLLRSS

Specific function: Unknown

COG id: COG3538

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56400; Mature: 56400

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIPTDSITEPARDDSTQPATAAVSRRTMLGMLGAAAGSALIGGIPGARAATSSAASRF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHH
VSKRPPKAQRRFVSTAVEQQITQIKARIADPELAWLFENCYPNTLDTTVETGTRNGKPDT
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCE
FVITGDIHAMWLRDSSAQVHPYVPLARRDPALRRMFHGLIQRQAACIKLDPYANAFLPDG
EEEECCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
QTQRLKWSLNDITEMKPGVGERKWEIDSLCYPIRIAHEYWRATGDTAPFDDDWREAMHVV
CCCEEEEEHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
VRTFREQQRKDNRGPYVFQRPSPLATETLVLEGYGQPTKPNGMIHSMFRPSDDACVFPLF
HHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCEEEEEE
VPANLFAVASLRQLASMSTQIHRDSAFAADCTALADEVETATRQFGQMRDSDGQAYWAFE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
VDGYGNQLFIDDANAPGLLSLAYLGCCDRADPVFLRTRQLAWSERNPYFSRGTAAEGVGS
ECCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCC
PHSGMGTIWPMAIVQYALVSDDDTQLRQCLQWLKTTHAGTGFMHEAFDKDNPATFTRDWF
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHH
AWANTLFGELIIDLHQRKPQLLRSS
HHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MRKIPTDSITEPARDDSTQPATAAVSRRTMLGMLGAAAGSALIGGIPGARAATSSAASRF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHH
VSKRPPKAQRRFVSTAVEQQITQIKARIADPELAWLFENCYPNTLDTTVETGTRNGKPDT
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCE
FVITGDIHAMWLRDSSAQVHPYVPLARRDPALRRMFHGLIQRQAACIKLDPYANAFLPDG
EEEECCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC
QTQRLKWSLNDITEMKPGVGERKWEIDSLCYPIRIAHEYWRATGDTAPFDDDWREAMHVV
CCCEEEEEHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
VRTFREQQRKDNRGPYVFQRPSPLATETLVLEGYGQPTKPNGMIHSMFRPSDDACVFPLF
HHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCEEEEEE
VPANLFAVASLRQLASMSTQIHRDSAFAADCTALADEVETATRQFGQMRDSDGQAYWAFE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
VDGYGNQLFIDDANAPGLLSLAYLGCCDRADPVFLRTRQLAWSERNPYFSRGTAAEGVGS
ECCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCC
PHSGMGTIWPMAIVQYALVSDDDTQLRQCLQWLKTTHAGTGFMHEAFDKDNPATFTRDWF
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHH
AWANTLFGELIIDLHQRKPQLLRSS
HHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA