| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767542
Identifier: 66767542
GI number: 66767542
Start: 1478417
End: 1480762
Strand: Reverse
Name: 66767542
Synonym: XC_1215
Alternate gene names: NA
Gene position: 1480762-1478417 (Counterclockwise)
Preceding gene: 66767543
Following gene: 66767541
Centisome position: 28.76
GC content: 66.2
Gene sequence:
>2346_bases ATGGCAACACGACGCGGTTTTTTACAAGGCGCCATCGCAGCAGCCCTCTTCGGTAGCGGCGCTCTGGCCACAGGCCTCGC CCGCGCACGCGCAGGCACCTACGCACTGCCGGCCGATGCGCGCACCCGCGCTGACCTCACCCGCCATGTCGATGTCTTCA TCGGCACCGGCGGCCACGGCCACACCTTCCCTGGCGCGACATTGCCGTTCGGCATGGTGCAGCTCAGCCCGGACACCTAC AACGCGGTGTGGGATTCGTGCTCGGGCTACCACGAGTCCGATGGCTCGATCATGGGCTTCTCGCACACGCATCTGTCCGG CACCGGTATTGGCGACATGCTCGATGTGTTGCTGGTGCCAGCCACCGGCGAGGTCAAGCTGGTACCCGGCCCGCTGGATG ATCCCGACGCCGGCTATCGCTCACGCTACGACCATGCGGATGAAGCGGCCTCGCCTGGCTACTACCGCGTGCGGCTCAAG GACAGCGGCGTGCATGCCGAACTCACCGCCACCGCGCGCGCCGGCCTGCACCGGTACCACTTCCCCAAGGGCAAACCTGC GCACGTGCTGCTGGACCTGTGCCATGGCATGCAGGACAAACCCGGCATCGCCACCCGCGTGAGCGATGCGCAGCTGCGCG TGGTCGACGCACAGACCATCACCGGCGGCCGCCGTGTCTATCAATGGGCCAAGGGCCGCTATATCTACTTCGCCATGCGG CTGTCGCGCCCGTTCGAAAAGGTGCAGCTGTACAACGAAGACCAGCCCCTCGCCGCCGGGCTGCGCAGCGCCGATGGCGT GCATCTCAAGGCCGCACTGCATTATCCGGATGCCTCCGAGGCGCCGTTGCTGATCAAGGTCGGCATCTCGGCGGTGAGCG CGGACAACGCGTTGGCCAACCTGGATGCCGAACTTCCCGACTTCGACTTCGCCCGCGTGCATGCGCAAGCCGTGGCCGCG TGGGAAAAGGAACTGGGGCGCGTGCGCATCGACAGCGACGACGAGGCGCAACGGCGCATCTTCTACACCGGTCTGTATCA CAGCCTGTTGGCGCCTACGTTGTTCAGCGACGTCGATGGCCGCTACCGCGGCATGGACCTGCAGATCCACACCGCACCCA AGGGGTATCACAACTACAGCACCTACTCGTTGTGGGACACCTACCGCGCTGCGCATCCGCTGCTCACCCTGGTGCAACCC GAGCGCGTGCCGGACCTGGTGCAGTGCCTGGTGCGCGGCGCCAACGAGTGCCCGGACGGCGTGGGCATCTGGCCGCTGCA GGGCGTGGAAACCGGCTGCATGATCGGCTACCACTCCGCAGTGGTGCTGGCCGAAGCGCACGCCAAGGGCTTCACCGGCA TCGACTACAAAGCCGCCTGGCCGGCCTACCGCAAACGCGCGATGGACGACACCACGCACGGCCTGGCGTATTACCGCGCG CTTGGCTACATCCCCGCCGACAAGGTGGACGAGGCGGTCAGCCGTACCCTGGAATACGCCTACGACGACTGGGCCTGTGC GCACCTGGCGCAAGCCGCTGGCGCCACCGAGGATGCACGCACACTGCGCGACCGTTCGCGCAATTACCGTAACGTGTTCA ACCGCGACAGCGGCTTCGTGCAGGCGCGCCTGGAAGACGGCAGCTGGGCCAAACCGTTCGACCCGCGTGGCATGGGGCAC ATCGCCAAGTGGCGCGATTTCACCGAGTCCAATGCCTGGCAGGCCACCTTCCTCAACCAGCACGATCTGTATGGCTATAT GGATTTGTACGGCGGCCGCGATGGCTTCCTGGCCAAGCTGGACGAGCTGTTTTCCACCAGCTCCGAGTTGCCGGCCGACG CACCGCCGGATATCGACGGCCTGGTTGGCCAGTACGCGCACGGCAACGAACCCAGCCACCATGTGGCGTACCTGTTCGCC TACGCCGGGCAACCGTACAAGACCCAGGCGATGGTGCGCCGGCTGCTGCGCGAGCAATACCATGACGCGCGCAATGGTCT GTCCGGCAACGAGGATTGCGGGCAGATGAGTGCGTGGTTCGTGCTCAGCGCACTAGGCCTGTACGCCGTGGACCCGGTCA GCGGCAACTACGTACTCGGCAGCCCGTTGTTCAAGCGCGCCGAGCTGGACGTGGGCAACGGCCGCACGTTGCGCATCATT GCCCGCGACACCAGCGCCAAGAACCTCTACGTGCAGTCGCTGACCTGGAACGGCACGCCGATCACGCGCAGCTGGATGCG GCATGCCGACCTGGCCGCCGGCGGCACGCTGGAATTCCGCATGGGGGCCACGCCCAACCTGGCGTTTGGTGCAAGCAAGG AGGACCTGCCGCCGTCCTTCGCCTGA
Upstream 100 bases:
>100_bases CGACACCGCACTTGATCTTCCCTTCTCCCGCCGGGCGAAGGTGCCCGAAGGGCGGATGAGGGTGCCCCGGCATCGGCCCG CAAACTCCGAGACCAGACAC
Downstream 100 bases:
>100_bases GCGCGTGCGATCGTTGCGTCAGCGCCACGCGTTGGCGGCCACACCTGGTGCGCTCCTTCAAGCCGCTTCGCGCGCCATCG CGGCCTGCTGCATGGCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Lipoprotein
Number of amino acids: Translated: 781; Mature: 780
Protein sequence:
>781_residues MATRRGFLQGAIAAALFGSGALATGLARARAGTYALPADARTRADLTRHVDVFIGTGGHGHTFPGATLPFGMVQLSPDTY NAVWDSCSGYHESDGSIMGFSHTHLSGTGIGDMLDVLLVPATGEVKLVPGPLDDPDAGYRSRYDHADEAASPGYYRVRLK DSGVHAELTATARAGLHRYHFPKGKPAHVLLDLCHGMQDKPGIATRVSDAQLRVVDAQTITGGRRVYQWAKGRYIYFAMR LSRPFEKVQLYNEDQPLAAGLRSADGVHLKAALHYPDASEAPLLIKVGISAVSADNALANLDAELPDFDFARVHAQAVAA WEKELGRVRIDSDDEAQRRIFYTGLYHSLLAPTLFSDVDGRYRGMDLQIHTAPKGYHNYSTYSLWDTYRAAHPLLTLVQP ERVPDLVQCLVRGANECPDGVGIWPLQGVETGCMIGYHSAVVLAEAHAKGFTGIDYKAAWPAYRKRAMDDTTHGLAYYRA LGYIPADKVDEAVSRTLEYAYDDWACAHLAQAAGATEDARTLRDRSRNYRNVFNRDSGFVQARLEDGSWAKPFDPRGMGH IAKWRDFTESNAWQATFLNQHDLYGYMDLYGGRDGFLAKLDELFSTSSELPADAPPDIDGLVGQYAHGNEPSHHVAYLFA YAGQPYKTQAMVRRLLREQYHDARNGLSGNEDCGQMSAWFVLSALGLYAVDPVSGNYVLGSPLFKRAELDVGNGRTLRII ARDTSAKNLYVQSLTWNGTPITRSWMRHADLAAGGTLEFRMGATPNLAFGASKEDLPPSFA
Sequences:
>Translated_781_residues MATRRGFLQGAIAAALFGSGALATGLARARAGTYALPADARTRADLTRHVDVFIGTGGHGHTFPGATLPFGMVQLSPDTY NAVWDSCSGYHESDGSIMGFSHTHLSGTGIGDMLDVLLVPATGEVKLVPGPLDDPDAGYRSRYDHADEAASPGYYRVRLK DSGVHAELTATARAGLHRYHFPKGKPAHVLLDLCHGMQDKPGIATRVSDAQLRVVDAQTITGGRRVYQWAKGRYIYFAMR LSRPFEKVQLYNEDQPLAAGLRSADGVHLKAALHYPDASEAPLLIKVGISAVSADNALANLDAELPDFDFARVHAQAVAA WEKELGRVRIDSDDEAQRRIFYTGLYHSLLAPTLFSDVDGRYRGMDLQIHTAPKGYHNYSTYSLWDTYRAAHPLLTLVQP ERVPDLVQCLVRGANECPDGVGIWPLQGVETGCMIGYHSAVVLAEAHAKGFTGIDYKAAWPAYRKRAMDDTTHGLAYYRA LGYIPADKVDEAVSRTLEYAYDDWACAHLAQAAGATEDARTLRDRSRNYRNVFNRDSGFVQARLEDGSWAKPFDPRGMGH IAKWRDFTESNAWQATFLNQHDLYGYMDLYGGRDGFLAKLDELFSTSSELPADAPPDIDGLVGQYAHGNEPSHHVAYLFA YAGQPYKTQAMVRRLLREQYHDARNGLSGNEDCGQMSAWFVLSALGLYAVDPVSGNYVLGSPLFKRAELDVGNGRTLRII ARDTSAKNLYVQSLTWNGTPITRSWMRHADLAAGGTLEFRMGATPNLAFGASKEDLPPSFA >Mature_780_residues ATRRGFLQGAIAAALFGSGALATGLARARAGTYALPADARTRADLTRHVDVFIGTGGHGHTFPGATLPFGMVQLSPDTYN AVWDSCSGYHESDGSIMGFSHTHLSGTGIGDMLDVLLVPATGEVKLVPGPLDDPDAGYRSRYDHADEAASPGYYRVRLKD SGVHAELTATARAGLHRYHFPKGKPAHVLLDLCHGMQDKPGIATRVSDAQLRVVDAQTITGGRRVYQWAKGRYIYFAMRL SRPFEKVQLYNEDQPLAAGLRSADGVHLKAALHYPDASEAPLLIKVGISAVSADNALANLDAELPDFDFARVHAQAVAAW EKELGRVRIDSDDEAQRRIFYTGLYHSLLAPTLFSDVDGRYRGMDLQIHTAPKGYHNYSTYSLWDTYRAAHPLLTLVQPE RVPDLVQCLVRGANECPDGVGIWPLQGVETGCMIGYHSAVVLAEAHAKGFTGIDYKAAWPAYRKRAMDDTTHGLAYYRAL GYIPADKVDEAVSRTLEYAYDDWACAHLAQAAGATEDARTLRDRSRNYRNVFNRDSGFVQARLEDGSWAKPFDPRGMGHI AKWRDFTESNAWQATFLNQHDLYGYMDLYGGRDGFLAKLDELFSTSSELPADAPPDIDGLVGQYAHGNEPSHHVAYLFAY AGQPYKTQAMVRRLLREQYHDARNGLSGNEDCGQMSAWFVLSALGLYAVDPVSGNYVLGSPLFKRAELDVGNGRTLRIIA RDTSAKNLYVQSLTWNGTPITRSWMRHADLAAGGTLEFRMGATPNLAFGASKEDLPPSFA
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85632; Mature: 85501
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRRGFLQGAIAAALFGSGALATGLARARAGTYALPADARTRADLTRHVDVFIGTGGHG CCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCCHHHHHHHEEEEEEEECCCCC HTFPGATLPFGMVQLSPDTYNAVWDSCSGYHESDGSIMGFSHTHLSGTGIGDMLDVLLVP CCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHEEEC ATGEVKLVPGPLDDPDAGYRSRYDHADEAASPGYYRVRLKDSGVHAELTATARAGLHRYH CCCCEEEECCCCCCCCCCHHHCCCCCHHCCCCCEEEEEEECCCCEEEEEHHHHHCHHHHC FPKGKPAHVLLDLCHGMQDKPGIATRVSDAQLRVVDAQTITGGRRVYQWAKGRYIYFAMR CCCCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHHCCCEEEEEEE LSRPFEKVQLYNEDQPLAAGLRSADGVHLKAALHYPDASEAPLLIKVGISAVSADNALAN CCCCHHHHEECCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCEEECCCCHHHH LDAELPDFDFARVHAQAVAAWEKELGRVRIDSDDEAQRRIFYTGLYHSLLAPTLFSDVDG CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCHHHEEEHHHHHHHHHHHHHHHCCCC RYRGMDLQIHTAPKGYHNYSTYSLWDTYRAAHPLLTLVQPERVPDLVQCLVRGANECPDG CEECEEEEEEECCCCCCCCCEEEHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCC VGIWPLQGVETGCMIGYHSAVVLAEAHAKGFTGIDYKAAWPAYRKRAMDDTTHGLAYYRA CCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH LGYIPADKVDEAVSRTLEYAYDDWACAHLAQAAGATEDARTLRDRSRNYRNVFNRDSGFV HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEE QARLEDGSWAKPFDPRGMGHIAKWRDFTESNAWQATFLNQHDLYGYMDLYGGRDGFLAKL EEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCEEEHHHCCCCCHHHHHH DELFSTSSELPADAPPDIDGLVGQYAHGNEPSHHVAYLFAYAGQPYKTQAMVRRLLREQY HHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH HDARNGLSGNEDCGQMSAWFVLSALGLYAVDPVSGNYVLGSPLFKRAELDVGNGRTLRII HHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEECCCCHHHHEEECCCCCEEEEE ARDTSAKNLYVQSLTWNGTPITRSWMRHADLAAGGTLEFRMGATPNLAFGASKEDLPPSF EECCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC A C >Mature Secondary Structure ATRRGFLQGAIAAALFGSGALATGLARARAGTYALPADARTRADLTRHVDVFIGTGGHG CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCCHHHHHHHEEEEEEEECCCCC HTFPGATLPFGMVQLSPDTYNAVWDSCSGYHESDGSIMGFSHTHLSGTGIGDMLDVLLVP CCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHEEEC ATGEVKLVPGPLDDPDAGYRSRYDHADEAASPGYYRVRLKDSGVHAELTATARAGLHRYH CCCCEEEECCCCCCCCCCHHHCCCCCHHCCCCCEEEEEEECCCCEEEEEHHHHHCHHHHC FPKGKPAHVLLDLCHGMQDKPGIATRVSDAQLRVVDAQTITGGRRVYQWAKGRYIYFAMR CCCCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHHCCCEEEEEEE LSRPFEKVQLYNEDQPLAAGLRSADGVHLKAALHYPDASEAPLLIKVGISAVSADNALAN CCCCHHHHEECCCCCHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCEEECCCCHHHH LDAELPDFDFARVHAQAVAAWEKELGRVRIDSDDEAQRRIFYTGLYHSLLAPTLFSDVDG CCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCHHHEEEHHHHHHHHHHHHHHHCCCC RYRGMDLQIHTAPKGYHNYSTYSLWDTYRAAHPLLTLVQPERVPDLVQCLVRGANECPDG CEECEEEEEEECCCCCCCCCEEEHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCC VGIWPLQGVETGCMIGYHSAVVLAEAHAKGFTGIDYKAAWPAYRKRAMDDTTHGLAYYRA CCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH LGYIPADKVDEAVSRTLEYAYDDWACAHLAQAAGATEDARTLRDRSRNYRNVFNRDSGFV HCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEE QARLEDGSWAKPFDPRGMGHIAKWRDFTESNAWQATFLNQHDLYGYMDLYGGRDGFLAKL EEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCEEEHHHCCCCCHHHHHH DELFSTSSELPADAPPDIDGLVGQYAHGNEPSHHVAYLFAYAGQPYKTQAMVRRLLREQY HHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH HDARNGLSGNEDCGQMSAWFVLSALGLYAVDPVSGNYVLGSPLFKRAELDVGNGRTLRII HHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEECCCCHHHHEEECCCCCEEEEE ARDTSAKNLYVQSLTWNGTPITRSWMRHADLAAGGTLEFRMGATPNLAFGASKEDLPPSF EECCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA