Click here to switch to the map view.

The map label for this gene is 66767509

Identifier: 66767509

GI number: 66767509

Start: 1432362

End: 1433237

Strand: Reverse

Name: 66767509

Synonym: XC_1181

Alternate gene names: NA

Gene position: 1433237-1432362 (Counterclockwise)

Preceding gene: 66767510

Following gene: 77761137

Centisome position: 27.84

GC content: 69.98

Gene sequence:

>876_bases
ATGAGCACGGCCGCGGCCTTGCCTGCACCGATGGACGAACGCCAGCGTCTGACCGCGACGCTGGTGATCTCGCTGCTGCT
GCATGGCCTGCTGATCCTGGGTGTGGGCTTTGCGGTGAGCGAAGACGCACCGCTGGTGCCCACCCTGGATGTGATCTTCA
GCCAGACCAGCACCCCGCTGACGCCCAAGCAGGCCGACTTCCTGGCCCAGGCCAACCAGCAGGGCGGCGGCAACCACGAC
ACCGCGCAGCGCCCGCGCGACAGCCAACCGGGCGTGGTACCGCAAGACCGCAACGGGCTGGCGCCGCAGGCGCAGCGCGC
CACCACCGTGCAGGCGCCCTTGCCGACGCAGACGCGGGTGGTGTCCAGCCGCCGCGGCGAACAGGCCGTGCCGACGCCAC
AACCCAATCCGCAGACCGACCCGCTCTCGCCTGCCGACGCGCAACGCGTGCAGCGCGATGCCGAGATGGCGCGGCTGGCG
GCCGAGGTGCATCTGCGCTCGGAGCAGTACGCCAAGCGCCCCAACCGCAAGTTCGTCTCTGCCAGCACCCGCGAGTACGC
CTACGCGAACTATCTGCGTGCCTGGGTGGACCGCGCCGAACGGGTCGGCAACCTCAATTACCCTGACGAAGCGCGCCGCC
GCCGGCTAGGCGGCAAGGTGGTAATCACCGTTGGCGTGCGCCGCGACGGCAGCGTGGAAAGCAGCCGCGTACTGGTCTCC
AGCGGCACCCCGGTGCTGGATGCGGCCGCCTTGCGGGTGGTGCAACTGGCACAGCCGTTTCCGCCGCTGCCGCGCAGCAA
GGACGATGTCGACATCCTGCAGGTCACCCGGACCTGGTTGTTCCTGCCCGGCGGCGAATTGCACGACGACCGCTGA

Upstream 100 bases:

>100_bases
TCAACGTCACCAGCCCCACCTGCGTGCGTGAGCTGGATGCGCAGTTCGGGCTCAATATTGCCGGGCTGCTGTTCGATGCG
ATCGAGGCCGGCACCGCGCA

Downstream 100 bases:

>100_bases
GCGTGCATCCGCGAGGGGCTGAATGGGCACTGCCTGGGCACGCGCTGCTGGTCAATCGGTAGCGTCTTGATGAGCGCCCA
CATTGCGCGCTGGAGTGCAG

Product: TonB protein

Products: NA

Alternate protein names: NB Protein; NB-Like Protein; NB Family C-Terminal Domain Protein; NB-Like; NB C-Terminal; NB Domain-Containing Protein; Periplasmic Protein nB Links Inner And Outer Membranes; NB-Related Transmembrane Protein; Nb Family Protein; NB Domain Protein; NB-Like Domain-Containing Protein; Periplasmic Protein/ Biopolymer Transport; NB-Dependent Receptor; NB Family C-Terminal Domain-Containing; Nb Protein

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSTAAALPAPMDERQRLTATLVISLLLHGLLILGVGFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQGGGNHD
TAQRPRDSQPGVVPQDRNGLAPQAQRATTVQAPLPTQTRVVSSRRGEQAVPTPQPNPQTDPLSPADAQRVQRDAEMARLA
AEVHLRSEQYAKRPNRKFVSASTREYAYANYLRAWVDRAERVGNLNYPDEARRRRLGGKVVITVGVRRDGSVESSRVLVS
SGTPVLDAAALRVVQLAQPFPPLPRSKDDVDILQVTRTWLFLPGGELHDDR

Sequences:

>Translated_291_residues
MSTAAALPAPMDERQRLTATLVISLLLHGLLILGVGFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQGGGNHD
TAQRPRDSQPGVVPQDRNGLAPQAQRATTVQAPLPTQTRVVSSRRGEQAVPTPQPNPQTDPLSPADAQRVQRDAEMARLA
AEVHLRSEQYAKRPNRKFVSASTREYAYANYLRAWVDRAERVGNLNYPDEARRRRLGGKVVITVGVRRDGSVESSRVLVS
SGTPVLDAAALRVVQLAQPFPPLPRSKDDVDILQVTRTWLFLPGGELHDDR
>Mature_290_residues
STAAALPAPMDERQRLTATLVISLLLHGLLILGVGFAVSEDAPLVPTLDVIFSQTSTPLTPKQADFLAQANQQGGGNHDT
AQRPRDSQPGVVPQDRNGLAPQAQRATTVQAPLPTQTRVVSSRRGEQAVPTPQPNPQTDPLSPADAQRVQRDAEMARLAA
EVHLRSEQYAKRPNRKFVSASTREYAYANYLRAWVDRAERVGNLNYPDEARRRRLGGKVVITVGVRRDGSVESSRVLVSS
GTPVLDAAALRVVQLAQPFPPLPRSKDDVDILQVTRTWLFLPGGELHDDR

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31762; Mature: 31631

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAAALPAPMDERQRLTATLVISLLLHGLLILGVGFAVSEDAPLVPTLDVIFSQTSTPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHCCCCCCC
TPKQADFLAQANQQGGGNHDTAQRPRDSQPGVVPQDRNGLAPQAQRATTVQAPLPTQTRV
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCEEEECCCCCHHHH
VSSRRGEQAVPTPQPNPQTDPLSPADAQRVQRDAEMARLAAEVHLRSEQYAKRPNRKFVS
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
ASTREYAYANYLRAWVDRAERVGNLNYPDEARRRRLGGKVVITVGVRRDGSVESSRVLVS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEE
SGTPVLDAAALRVVQLAQPFPPLPRSKDDVDILQVTRTWLFLPGGELHDDR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure 
STAAALPAPMDERQRLTATLVISLLLHGLLILGVGFAVSEDAPLVPTLDVIFSQTSTPL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHCCCCCCC
TPKQADFLAQANQQGGGNHDTAQRPRDSQPGVVPQDRNGLAPQAQRATTVQAPLPTQTRV
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCEEEECCCCCHHHH
VSSRRGEQAVPTPQPNPQTDPLSPADAQRVQRDAEMARLAAEVHLRSEQYAKRPNRKFVS
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
ASTREYAYANYLRAWVDRAERVGNLNYPDEARRRRLGGKVVITVGVRRDGSVESSRVLVS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEE
SGTPVLDAAALRVVQLAQPFPPLPRSKDDVDILQVTRTWLFLPGGELHDDR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA