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The map label for this gene is 66767435

Identifier: 66767435

GI number: 66767435

Start: 1335651

End: 1336940

Strand: Reverse

Name: 66767435

Synonym: XC_1107

Alternate gene names: NA

Gene position: 1336940-1335651 (Counterclockwise)

Preceding gene: 66767436

Following gene: 77761132

Centisome position: 25.97

GC content: 67.67

Gene sequence:

>1290_bases
GTGCGATGCCAGGCAGCCCGCTCTACACCGGTTGACCCACCGTCCTGTCGAACGAGAGCTGCCATGAACGCAACGCCCGA
TGCACCGCTGGTGATCCTGACCCACGTCTGCCACCCGGCAATCACCGATGGCTTCCTGCCTGCAGCACACGCGCAGGGTC
TGCCGGTGTGGCTGCTGACCGACCATCGCCTGGAGCATCTTGCGCACTTCAACGCGCATCCGGCACACGCGCCGCAGCGG
GTGATCGCCTGCGATGTGTTCAATCCGCTGGGCGTGCTGGACGTGCTGCACGACGCCGGCGTGCACCCACGCGCGGTGTT
CAGCAACAGCGATCACCTGCAGACCAGCACCGCGCTGGTGGCTGCCGGCCTGGGGCTGCCCGGCAAGGACTGGCAGGTGT
GCTACGCCGCCAAGAACAAGGCGGCGATGCGCCAGCGCCTGCAGGCGCGTGGGATGCCATCGCCCTGGTTTTGCACGCTG
GCGCCGGGCGCGGCCTTGCCTGCGCAGATCCCGTGGCCGGTGGTGGCCAAACCGCGCGAGGGCGTGGCCAGCCTGGATGT
GCGCCAGTGCGCCGATGCCGCGCAATTGCAGGCGTATCTGGACGATGTGTGGCAACGCCACCCGCAACGCACGGTGTTGC
TGGAAGGCTTGCTGGAAGGTGACCTTTTCACGCTGGAAACGCTGGGCGACGGGCAGCACCTGCAGGCCATCGGCGGGTTC
AAGGTGCGGCTGTCGCCGCCACCGCATTTTGTCGAATGCGAGGCGCAATGGGACGCGCAGGTGGACACGCCGGTGATCGC
GCAGGCGTTGGCGCAATTGCGGGCGTTCGGCGTGGGCTTCGGGCTATGCCATAGCGAATTCATCCTCACCCGCGACGGGC
CGGTGCTGGTGGAGATCAACTACCGCAGCATCGGCGACCGGCGCGAATTCCTGCTCGATGCAATGTTCGGCCAGCAGTGG
TTTGCCGCCGCGCTGGCACCGCACCTGGGCCAGCCGCTGCCACTGCTGCACAGCGAGCGCACGCACGCCTTGCTGCGCTA
TTACGTGGCCGAACATGCCGGCGAGCTGGTCAGTGCCAGCGACGACCGCAACCATCGCAGCGCGCACAGCGATGTGCAGT
ACCGCCGCATGCGCGTGCCCGGCGAGCAGATCCGGCTCAGCCATTCCAACAAGGATTACCTCGGCGTGCTGAGCGCACTG
GCGCGCGATGCCGATGCATTGCAGCAGGCCGTGCACCAGGCCGAAGCCGGCCTGCAGTGGCGGATCGACCCACCGGAGCT
GCGCGCATGA

Upstream 100 bases:

>100_bases
ATCACGCTGCCGCACTACCGAAGACAGTGCGCATGAAGCGCACTTCGCGCCGCGCTGCGGCGATGCGACCTGCTGCGTCG
TAGGCCACCCCGTGTCGCGT

Downstream 100 bases:

>100_bases
GCAACGCGACCGATCAGCACTACATCACCACGCGCATCATCGATGCCTGCCTGCGCGAAGATCTGCGCGGCATCGCCAGC
CGCGGCAGCGCGGCAATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MRCQAARSTPVDPPSCRTRAAMNATPDAPLVILTHVCHPAITDGFLPAAHAQGLPVWLLTDHRLEHLAHFNAHPAHAPQR
VIACDVFNPLGVLDVLHDAGVHPRAVFSNSDHLQTSTALVAAGLGLPGKDWQVCYAAKNKAAMRQRLQARGMPSPWFCTL
APGAALPAQIPWPVVAKPREGVASLDVRQCADAAQLQAYLDDVWQRHPQRTVLLEGLLEGDLFTLETLGDGQHLQAIGGF
KVRLSPPPHFVECEAQWDAQVDTPVIAQALAQLRAFGVGFGLCHSEFILTRDGPVLVEINYRSIGDRREFLLDAMFGQQW
FAAALAPHLGQPLPLLHSERTHALLRYYVAEHAGELVSASDDRNHRSAHSDVQYRRMRVPGEQIRLSHSNKDYLGVLSAL
ARDADALQQAVHQAEAGLQWRIDPPELRA

Sequences:

>Translated_429_residues
MRCQAARSTPVDPPSCRTRAAMNATPDAPLVILTHVCHPAITDGFLPAAHAQGLPVWLLTDHRLEHLAHFNAHPAHAPQR
VIACDVFNPLGVLDVLHDAGVHPRAVFSNSDHLQTSTALVAAGLGLPGKDWQVCYAAKNKAAMRQRLQARGMPSPWFCTL
APGAALPAQIPWPVVAKPREGVASLDVRQCADAAQLQAYLDDVWQRHPQRTVLLEGLLEGDLFTLETLGDGQHLQAIGGF
KVRLSPPPHFVECEAQWDAQVDTPVIAQALAQLRAFGVGFGLCHSEFILTRDGPVLVEINYRSIGDRREFLLDAMFGQQW
FAAALAPHLGQPLPLLHSERTHALLRYYVAEHAGELVSASDDRNHRSAHSDVQYRRMRVPGEQIRLSHSNKDYLGVLSAL
ARDADALQQAVHQAEAGLQWRIDPPELRA
>Mature_429_residues
MRCQAARSTPVDPPSCRTRAAMNATPDAPLVILTHVCHPAITDGFLPAAHAQGLPVWLLTDHRLEHLAHFNAHPAHAPQR
VIACDVFNPLGVLDVLHDAGVHPRAVFSNSDHLQTSTALVAAGLGLPGKDWQVCYAAKNKAAMRQRLQARGMPSPWFCTL
APGAALPAQIPWPVVAKPREGVASLDVRQCADAAQLQAYLDDVWQRHPQRTVLLEGLLEGDLFTLETLGDGQHLQAIGGF
KVRLSPPPHFVECEAQWDAQVDTPVIAQALAQLRAFGVGFGLCHSEFILTRDGPVLVEINYRSIGDRREFLLDAMFGQQW
FAAALAPHLGQPLPLLHSERTHALLRYYVAEHAGELVSASDDRNHRSAHSDVQYRRMRVPGEQIRLSHSNKDYLGVLSAL
ARDADALQQAVHQAEAGLQWRIDPPELRA

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005479 [H]

Pfam domain/function: PF02786 CPSase_L_D2 [H]

EC number: NA

Molecular weight: Translated: 47064; Mature: 47064

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCQAARSTPVDPPSCRTRAAMNATPDAPLVILTHVCHPAITDGFLPAAHAQGLPVWLLT
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCEEEEEC
DHRLEHLAHFNAHPAHAPQRVIACDVFNPLGVLDVLHDAGVHPRAVFSNSDHLQTSTALV
HHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
AAGLGLPGKDWQVCYAAKNKAAMRQRLQARGMPSPWFCTLAPGAALPAQIPWPVVAKPRE
HHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
GVASLDVRQCADAAQLQAYLDDVWQRHPQRTVLLEGLLEGDLFTLETLGDGQHLQAIGGF
CCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCEEEEECCE
KVRLSPPPHFVECEAQWDAQVDTPVIAQALAQLRAFGVGFGLCHSEFILTRDGPVLVEIN
EEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCEEEEECCCCEEEEEE
YRSIGDRREFLLDAMFGQQWFAAALAPHLGQPLPLLHSERTHALLRYYVAEHAGELVSAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
DDRNHRSAHSDVQYRRMRVPGEQIRLSHSNKDYLGVLSALARDADALQQAVHQAEAGLQW
CCCCCCHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCEE
RIDPPELRA
ECCCCCCCC
>Mature Secondary Structure
MRCQAARSTPVDPPSCRTRAAMNATPDAPLVILTHVCHPAITDGFLPAAHAQGLPVWLLT
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCEEEEEC
DHRLEHLAHFNAHPAHAPQRVIACDVFNPLGVLDVLHDAGVHPRAVFSNSDHLQTSTALV
HHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
AAGLGLPGKDWQVCYAAKNKAAMRQRLQARGMPSPWFCTLAPGAALPAQIPWPVVAKPRE
HHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
GVASLDVRQCADAAQLQAYLDDVWQRHPQRTVLLEGLLEGDLFTLETLGDGQHLQAIGGF
CCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCEEEEECCE
KVRLSPPPHFVECEAQWDAQVDTPVIAQALAQLRAFGVGFGLCHSEFILTRDGPVLVEIN
EEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCEEEEECCCCEEEEEE
YRSIGDRREFLLDAMFGQQWFAAALAPHLGQPLPLLHSERTHALLRYYVAEHAGELVSAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
DDRNHRSAHSDVQYRRMRVPGEQIRLSHSNKDYLGVLSALARDADALQQAVHQAEAGLQW
CCCCCCHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCEE
RIDPPELRA
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]