| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is fecA [H]
Identifier: 66767436
GI number: 66767436
Start: 1337062
End: 1339191
Strand: Reverse
Name: fecA [H]
Synonym: XC_1108
Alternate gene names: 66767436
Gene position: 1339191-1337062 (Counterclockwise)
Preceding gene: 66767437
Following gene: 66767435
Centisome position: 26.01
GC content: 64.23
Gene sequence:
>2130_bases ATGCCGACGTTCCGTTTCCACGCCCTGGCCATTGCCATCGCCGCCACCACCTTGAGCGCTGCACCGCTGGCGCGGGCCGG CGAGACCGACGGCACTGCGGTAGAGACCGATACTTCGATTCGCGCGCTTGATGCGGTGCAGGTGCAAGGCAGCCTGCTGG GCCGCTCCAAGCCCGAAGACGTGCAGCGCTACGCCGGCAGCCGCCAGGTGATCGACCGCGAACAACTGCGCAATGGCGGC AATCGCTCATTGGACGATGCCCTGCAGCGCGTGCCCGGCATCAAGATCTTCGATGAAACCGGCACCGGCGCCCTGCCGCA ACTCATGCTGCGCGGCCTGTACGAGAGCCGCAGCGGGCGCGTGCAGGTGCTGGAAGACGGCATTCCGCTCGCACTGGCGC CGTACGGGCAAACCAGCCTGTCGCTGTTCCCGGTCGGCTTGAACCAGATCGACCGCATCGACATCGTGCGCGGCGGCGCG GCCGTGCAATACGGGCCCAACAACGTGGGCGGCGTGATCAACCTGGTCAGCAAGGAGATTCCCAGCGACTGGACCACCAC CCTGGCGCACAAGATCACCGCCGGTGGCCAGGGCCAGTTCCTGCAGGACAGTGCGCTGAGCAGCGGTGGCTACGTCACCG ACAACGTTGGCCTGCAGGTGGATGCCAACCGCACCTACGGCGAGTACTGGCGCGCGCACAGCGACACCGACATCAGCAAT CTGCGCGTGCGTGCGGAGTGGTGGATCGACGACACCAAGCTGCTCAAGGCCAGCGTGCAGCGGTATCTGGTGGACATGGA TCTGGCCGGTGCACTGAGCCCGGAGGATTACCGCCGCGATCCACGCCAATCCACTCGGCCGCTGGACAGTTTCAACGGCC GCACCACGCGTGCATCGTTGAGCTACGAGCAGGTGGTTGGTGACTGGGGCCCGCTGCAGGACGTGCGGCTGTCATGGACC AACTTCAGCGCGCGCAGCAGCCGCAACTTCATTGTCGGCATGCGCCAGGCTGCCACCGAAACCTGGCGTTCGGATCTGCC ACCGCAACTGCGCCAGACGGCGCCACGGGATTTTCGTGTGGTTGGCAGTGAGCCGCGCCTGACCTGGCGCATGGGCGATG TCGGCGGCGTGCAGCAACAATGGACCGCCGGCGTACGTGCGGTGCATGAAGACATCGATTTTCTGGTCGGCAATCTGCGC CTGCGCGATGGCCTGTTCACCAGCGTGCGCGATTGGCAGTTCGAAGACCGTGCGTTGGCGGCCTATGTCAGCAACGCCAT CACGCTGCCGGATGCACGCCTGACCATCACCCCGGGCCTACGCTATGAGCGGCTGGATTCGCGCTATTTCAACCGCACCA CCGGCGTGAGTACGCTCAACCAGACCCGCGATGTGCTGCCGGGCCTGACGGTTGGCTTCCAGGCCAACGACCAGTGGTTT GTGTATGCGGATGGGCAACGCTCGATGCGCGCGCCGCAGGTGACCCAGATCATCTTTGGCAACAATCTGGACGCGGAGCT GGCCTGGAATTACGAGCTCGGTACACGCTATCAACCCAATGAGCGCACCCGCATCCAGGTGGGCGCCTACCTCATTGATT TTGATCAGCAGATCCAGCTGGACAACACCACGCGGGTGTTCCGCAACCTCGGCAAGACACGCCATCAAGGCGGCGAGCTG GAACTGCAATGGAGCCCGGAACAACTGCGTGCACTGACCCTCAACGCCGGCTACGCGTATCTGGATGCACGGCAGGAATC GGGTGCGTTCGATGGCCTGCGCGTGCCTTACACCTCGCGCAACCAGATCACCTTGGGCGGCACCTACGCGCTCGGTCACA CCACTGTCGCGCTGTCGAGTTACTACTTCAGCAAGGCCTATAGCGATGCCGCCAACACGGTGCAGGAAAATGCCATTGCC TCGGTTGGCGAACTGCCGTCGTACTGGGTGTGGAATACGCAAGTGAGCCACACCTTGCTGGAACGCGGCGGGCAGAAGCT GAGCGCATCATTGGCGATCAACAACCTGTTCGACCGGCAGTACTGGTTCCGCGGCGTGGATACCAGCCCCTGGGGCCGCC AGGCCGCGCCCGGGCGCACCGTGACTGCAGGACTCGAATACACGTTCTGA
Upstream 100 bases:
>100_bases TGCCGGCGAAGACCGTGCCCTGATCCAACGCGCATTGCGCGGCCAGTTGGCCACCTTTGCCGCACCCCTTTCATCACCCG CCTGCAGGAGCACGCCGTAG
Downstream 100 bases:
>100_bases GTTGCGCCACGCGGCAGCCGCATCACGCTGCCGCACTACCGAAGACAGTGCGCATGAAGCGCACTTCGCGCCGCGCTGCG GCGATGCGACCTGCTGCGTC
Product: citrate-dependent iron transporter
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 709; Mature: 708
Protein sequence:
>709_residues MPTFRFHALAIAIAATTLSAAPLARAGETDGTAVETDTSIRALDAVQVQGSLLGRSKPEDVQRYAGSRQVIDREQLRNGG NRSLDDALQRVPGIKIFDETGTGALPQLMLRGLYESRSGRVQVLEDGIPLALAPYGQTSLSLFPVGLNQIDRIDIVRGGA AVQYGPNNVGGVINLVSKEIPSDWTTTLAHKITAGGQGQFLQDSALSSGGYVTDNVGLQVDANRTYGEYWRAHSDTDISN LRVRAEWWIDDTKLLKASVQRYLVDMDLAGALSPEDYRRDPRQSTRPLDSFNGRTTRASLSYEQVVGDWGPLQDVRLSWT NFSARSSRNFIVGMRQAATETWRSDLPPQLRQTAPRDFRVVGSEPRLTWRMGDVGGVQQQWTAGVRAVHEDIDFLVGNLR LRDGLFTSVRDWQFEDRALAAYVSNAITLPDARLTITPGLRYERLDSRYFNRTTGVSTLNQTRDVLPGLTVGFQANDQWF VYADGQRSMRAPQVTQIIFGNNLDAELAWNYELGTRYQPNERTRIQVGAYLIDFDQQIQLDNTTRVFRNLGKTRHQGGEL ELQWSPEQLRALTLNAGYAYLDARQESGAFDGLRVPYTSRNQITLGGTYALGHTTVALSSYYFSKAYSDAANTVQENAIA SVGELPSYWVWNTQVSHTLLERGGQKLSASLAINNLFDRQYWFRGVDTSPWGRQAAPGRTVTAGLEYTF
Sequences:
>Translated_709_residues MPTFRFHALAIAIAATTLSAAPLARAGETDGTAVETDTSIRALDAVQVQGSLLGRSKPEDVQRYAGSRQVIDREQLRNGG NRSLDDALQRVPGIKIFDETGTGALPQLMLRGLYESRSGRVQVLEDGIPLALAPYGQTSLSLFPVGLNQIDRIDIVRGGA AVQYGPNNVGGVINLVSKEIPSDWTTTLAHKITAGGQGQFLQDSALSSGGYVTDNVGLQVDANRTYGEYWRAHSDTDISN LRVRAEWWIDDTKLLKASVQRYLVDMDLAGALSPEDYRRDPRQSTRPLDSFNGRTTRASLSYEQVVGDWGPLQDVRLSWT NFSARSSRNFIVGMRQAATETWRSDLPPQLRQTAPRDFRVVGSEPRLTWRMGDVGGVQQQWTAGVRAVHEDIDFLVGNLR LRDGLFTSVRDWQFEDRALAAYVSNAITLPDARLTITPGLRYERLDSRYFNRTTGVSTLNQTRDVLPGLTVGFQANDQWF VYADGQRSMRAPQVTQIIFGNNLDAELAWNYELGTRYQPNERTRIQVGAYLIDFDQQIQLDNTTRVFRNLGKTRHQGGEL ELQWSPEQLRALTLNAGYAYLDARQESGAFDGLRVPYTSRNQITLGGTYALGHTTVALSSYYFSKAYSDAANTVQENAIA SVGELPSYWVWNTQVSHTLLERGGQKLSASLAINNLFDRQYWFRGVDTSPWGRQAAPGRTVTAGLEYTF >Mature_708_residues PTFRFHALAIAIAATTLSAAPLARAGETDGTAVETDTSIRALDAVQVQGSLLGRSKPEDVQRYAGSRQVIDREQLRNGGN RSLDDALQRVPGIKIFDETGTGALPQLMLRGLYESRSGRVQVLEDGIPLALAPYGQTSLSLFPVGLNQIDRIDIVRGGAA VQYGPNNVGGVINLVSKEIPSDWTTTLAHKITAGGQGQFLQDSALSSGGYVTDNVGLQVDANRTYGEYWRAHSDTDISNL RVRAEWWIDDTKLLKASVQRYLVDMDLAGALSPEDYRRDPRQSTRPLDSFNGRTTRASLSYEQVVGDWGPLQDVRLSWTN FSARSSRNFIVGMRQAATETWRSDLPPQLRQTAPRDFRVVGSEPRLTWRMGDVGGVQQQWTAGVRAVHEDIDFLVGNLRL RDGLFTSVRDWQFEDRALAAYVSNAITLPDARLTITPGLRYERLDSRYFNRTTGVSTLNQTRDVLPGLTVGFQANDQWFV YADGQRSMRAPQVTQIIFGNNLDAELAWNYELGTRYQPNERTRIQVGAYLIDFDQQIQLDNTTRVFRNLGKTRHQGGELE LQWSPEQLRALTLNAGYAYLDARQESGAFDGLRVPYTSRNQITLGGTYALGHTTVALSSYYFSKAYSDAANTVQENAIAS VGELPSYWVWNTQVSHTLLERGGQKLSASLAINNLFDRQYWFRGVDTSPWGRQAAPGRTVTAGLEYTF
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=685, Percent_Identity=32.7007299270073, Blast_Score=300, Evalue=2e-82, Organism=Escherichia coli, GI1790405, Length=125, Percent_Identity=35.2, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78863; Mature: 78732
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTFRFHALAIAIAATTLSAAPLARAGETDGTAVETDTSIRALDAVQVQGSLLGRSKPED CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEHHHEEHHHHHCCCCHHH VQRYAGSRQVIDREQLRNGGNRSLDDALQRVPGIKIFDETGTGALPQLMLRGLYESRSGR HHHHCCCHHHCCHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCC VQVLEDGIPLALAPYGQTSLSLFPVGLNQIDRIDIVRGGAAVQYGPNNVGGVINLVSKEI EEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHC PSDWTTTLAHKITAGGQGQFLQDSALSSGGYVTDNVGLQVDANRTYGEYWRAHSDTDISN CCCHHHHHHHHHCCCCCCCEECHHHCCCCCEEECCCCEEEECCCCHHHHHCCCCCCCCCC LRVRAEWWIDDTKLLKASVQRYLVDMDLAGALSPEDYRRDPRQSTRPLDSFNGRTTRASL EEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHCCCCHHCCCCCEEECC SYEQVVGDWGPLQDVRLSWTNFSARSSRNFIVGMRQAATETWRSDLPPQLRQTAPRDFRV CHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHCCCCCEEE VGSEPRLTWRMGDVGGVQQQWTAGVRAVHEDIDFLVGNLRLRDGLFTSVRDWQFEDRALA ECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHH AYVSNAITLPDARLTITPGLRYERLDSRYFNRTTGVSTLNQTRDVLPGLTVGFQANDQWF HHHHCCEECCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCEE VYADGQRSMRAPQVTQIIFGNNLDAELAWNYELGTRYQPNERTRIQVGAYLIDFDQQIQL EEECCCCCCCCCCEEEEEECCCCCCEEEEEEECCCEECCCCCCEEEEEEEEEECCCEEEE DNTTRVFRNLGKTRHQGGELELQWSPEQLRALTLNAGYAYLDARQESGAFDGLRVPYTSR CHHHHHHHHHHHHHCCCCEEEEEECHHHEEEEEEECCEEEEECCCCCCCCCCEECCCCCC NQITLGGTYALGHTTVALSSYYFSKAYSDAANTVQENAIASVGELPSYWVWNTQVSHTLL CEEEECCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH ERGGQKLSASLAINNLFDRQYWFRGVDTSPWGRQAAPGRTVTAGLEYTF HCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECEEECC >Mature Secondary Structure PTFRFHALAIAIAATTLSAAPLARAGETDGTAVETDTSIRALDAVQVQGSLLGRSKPED CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEEHHHEEHHHHHCCCCHHH VQRYAGSRQVIDREQLRNGGNRSLDDALQRVPGIKIFDETGTGALPQLMLRGLYESRSGR HHHHCCCHHHCCHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCC VQVLEDGIPLALAPYGQTSLSLFPVGLNQIDRIDIVRGGAAVQYGPNNVGGVINLVSKEI EEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCHHHHHHHHHC PSDWTTTLAHKITAGGQGQFLQDSALSSGGYVTDNVGLQVDANRTYGEYWRAHSDTDISN CCCHHHHHHHHHCCCCCCCEECHHHCCCCCEEECCCCEEEECCCCHHHHHCCCCCCCCCC LRVRAEWWIDDTKLLKASVQRYLVDMDLAGALSPEDYRRDPRQSTRPLDSFNGRTTRASL EEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHCCCCHHCCCCCEEECC SYEQVVGDWGPLQDVRLSWTNFSARSSRNFIVGMRQAATETWRSDLPPQLRQTAPRDFRV CHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHCCCHHHHHCCCCCEEE VGSEPRLTWRMGDVGGVQQQWTAGVRAVHEDIDFLVGNLRLRDGLFTSVRDWQFEDRALA ECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHH AYVSNAITLPDARLTITPGLRYERLDSRYFNRTTGVSTLNQTRDVLPGLTVGFQANDQWF HHHHCCEECCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCEE VYADGQRSMRAPQVTQIIFGNNLDAELAWNYELGTRYQPNERTRIQVGAYLIDFDQQIQL EEECCCCCCCCCCEEEEEECCCCCCEEEEEEECCCEECCCCCCEEEEEEEEEECCCEEEE DNTTRVFRNLGKTRHQGGELELQWSPEQLRALTLNAGYAYLDARQESGAFDGLRVPYTSR CHHHHHHHHHHHHHCCCCEEEEEECHHHEEEEEEECCEEEEECCCCCCCCCCEECCCCCC NQITLGGTYALGHTTVALSSYYFSKAYSDAANTVQENAIASVGELPSYWVWNTQVSHTLL CEEEECCEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHH ERGGQKLSASLAINNLFDRQYWFRGVDTSPWGRQAAPGRTVTAGLEYTF HCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]