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The map label for this gene is tsr [H]

Identifier: 66767402

GI number: 66767402

Start: 1290725

End: 1292593

Strand: Reverse

Name: tsr [H]

Synonym: XC_1074

Alternate gene names: 66767402

Gene position: 1292593-1290725 (Counterclockwise)

Preceding gene: 66767403

Following gene: 66767397

Centisome position: 25.11

GC content: 66.88

Gene sequence:

>1869_bases
ATGTTGCCTACCCTCGATGCCGCACCCGCCTCTCCTCCGCCCACCGGCCGGAACGTTGCGCGTGCCACCTGGACAGCCTG
GTTGCCGGCCGCGGCGCAGGCCGCGTTGCTGATCCTGCTTGCCGTCTACGCCGCCACGGCCATGCCCGGCGGCTTCTGGC
ACACCCTGGGCACGCTGCTACCGGCATTACTGGTGCTCGGCGCCGCCAGTGCGGGGCTGTGGTGGTGGTCGCGCCGGCGC
ACTGCCACCCAGCTCGACCAGGCAGTCACCGCCATTGCCGCCATCGGCGAAGGCCGCTTCCAGCGCCTGGACGCGCGCAG
CGCCAGCGGCGAACTCGCGCCGTTGCTGCGCACCCTGCAAGCCACCCAGGACAAGCTCGCCCTCCGCCTCGACGTGATGG
AGCAAGGCTTGCGCCACGGCCAGTTCGTGATCAAGGCGCTGGACGATCTGGACACCATGATCCGCATCGCCGATGACGAC
GGCCAGGTGCTGTTCGCCAACCGCAAACTGCTCAAGATGCTCAAGCTGATCGAGCCGGACGTGCAGAGCTTCCGCCCCAG
CTTCCATGCCGAAGGTTTCGTCGGCGGCAGCATCGGCGACATCTATCCGGACAGCCAGGCCGCCATCGACCGTATGCGTG
CGCTCACCGCCTCCAAGGCCGTGCGTGCGCCGTTCTTCGGCCGCCAGATCGACTTCGTCTACAGCCCGATCATCGCCGCC
GACGGCACCAAGCTCGGCACCATCGCGCAGTGGATGGACGTCACCGCGCAGGTCAACGCCGAGCAGGCGCTGATCGAGAT
CATCGATGCCGCTGCCGCTGGCGATTTCAGCCGCCGCATGCAGATGGACGGCATGGACGGCGTGCTGCTGTCGCTGGCGC
AAGGCATCAACCGCATTTACGACTCGGTGGAAACGCATCTGGCTGCATTGGCGCGCGTGATCAGCGCGCTGGCCGAGGGC
GACCTCACCCAGCGCGTGGATGGCGATGCGCATGGCATTTTCGCGCGCCTGCGTGACGACACCAACCAGACCGTGATCCG
CCTGACCGAAATCATCGGCGGCATCCAGACCGCGTCGGACACCATTCGCCGCGCTGCGGTGGAAATCGCTGCCGGCAACA
CCGATCTGTCCGAACGCACCGAGCAACAGGCCGCGAGCCTGGAAGAAACCGCCAGCTCCATGGAAGAACTCACCTCCACC
GTGAAGCAGAATGCCGACAGCGCGCAGCAGGCCAACAAGCTGGTGCTGGGCACCGGCGAAGTGGCGCAGAACGGTGGCCA
GGTGATGGACGATGTGGTGTCCACCATGAGCCAGATCAGCACTGCCTCGCGCAGGATCGGCGAGATCATCGGCGTCATCG
ACGGCATCGCGTTCCAGACCAACATCCTGGCGCTCAACGCCGCGGTGGAAGCAGCGCGCGCCGGCGAACAGGGCCGCGGC
TTCGCGGTGGTGGCCTCGGAAGTGCGCGCCCTGGCGCGACGTTCGGCCGATGCAGCCAAGGAGATCAAATCGTTGATCGC
CGACTCCACCGACAAGGTGGAACTGGGCTCGGGTCTGGTGCACCGCGCCGGCGCGACCATGCGCGAGATCGTCGGCTCGG
TGAAGCACGTCACCGACATCATGAGCGAGATCACCTCGGCCAGCGCCGAACAGTCCAGCGGCATCGAGCAGGTGAACCGC
ACCGTGGCGCAGCTGGACGAAGTGACCCAGCGCAACGCCGCCCTGGTGGAAGAAGCCACCGCCGCCGCGCGCAGCCTGGA
AGAACAGGCAGTGGAACTGGCCGATGCGGTGTCCATCTTCCGCCTGCAATCAGACACCCGCGGTAGCTCGAACGTGGTAC
GCGGCAGTTTTGGAAGCGCGGCGGCGTAA

Upstream 100 bases:

>100_bases
CTTCACACCGTCATGATTCGGGCCCGGCCGCCGATACCCCCTTGCAGCTACACACTGCCGGACGCGCTCCCCACCCAGAA
CACCAGTCGGACACCAGCCT

Downstream 100 bases:

>100_bases
CCCCGCACACCACCCGCATTCGTAGAGCCCTCCGTAGGGGCCTCGCGGTAACCCCCATCCGCCGTCATGTGTGTCGTTAA
AAAACGGCGGCGCGAATCCC

Product: chemotaxis protein

Products: NA

Alternate protein names: MCP-I; Serine chemoreceptor protein [H]

Number of amino acids: Translated: 622; Mature: 622

Protein sequence:

>622_residues
MLPTLDAAPASPPPTGRNVARATWTAWLPAAAQAALLILLAVYAATAMPGGFWHTLGTLLPALLVLGAASAGLWWWSRRR
TATQLDQAVTAIAAIGEGRFQRLDARSASGELAPLLRTLQATQDKLALRLDVMEQGLRHGQFVIKALDDLDTMIRIADDD
GQVLFANRKLLKMLKLIEPDVQSFRPSFHAEGFVGGSIGDIYPDSQAAIDRMRALTASKAVRAPFFGRQIDFVYSPIIAA
DGTKLGTIAQWMDVTAQVNAEQALIEIIDAAAAGDFSRRMQMDGMDGVLLSLAQGINRIYDSVETHLAALARVISALAEG
DLTQRVDGDAHGIFARLRDDTNQTVIRLTEIIGGIQTASDTIRRAAVEIAAGNTDLSERTEQQAASLEETASSMEELTST
VKQNADSAQQANKLVLGTGEVAQNGGQVMDDVVSTMSQISTASRRIGEIIGVIDGIAFQTNILALNAAVEAARAGEQGRG
FAVVASEVRALARRSADAAKEIKSLIADSTDKVELGSGLVHRAGATMREIVGSVKHVTDIMSEITSASAEQSSGIEQVNR
TVAQLDEVTQRNAALVEEATAAARSLEEQAVELADAVSIFRLQSDTRGSSNVVRGSFGSAAA

Sequences:

>Translated_622_residues
MLPTLDAAPASPPPTGRNVARATWTAWLPAAAQAALLILLAVYAATAMPGGFWHTLGTLLPALLVLGAASAGLWWWSRRR
TATQLDQAVTAIAAIGEGRFQRLDARSASGELAPLLRTLQATQDKLALRLDVMEQGLRHGQFVIKALDDLDTMIRIADDD
GQVLFANRKLLKMLKLIEPDVQSFRPSFHAEGFVGGSIGDIYPDSQAAIDRMRALTASKAVRAPFFGRQIDFVYSPIIAA
DGTKLGTIAQWMDVTAQVNAEQALIEIIDAAAAGDFSRRMQMDGMDGVLLSLAQGINRIYDSVETHLAALARVISALAEG
DLTQRVDGDAHGIFARLRDDTNQTVIRLTEIIGGIQTASDTIRRAAVEIAAGNTDLSERTEQQAASLEETASSMEELTST
VKQNADSAQQANKLVLGTGEVAQNGGQVMDDVVSTMSQISTASRRIGEIIGVIDGIAFQTNILALNAAVEAARAGEQGRG
FAVVASEVRALARRSADAAKEIKSLIADSTDKVELGSGLVHRAGATMREIVGSVKHVTDIMSEITSASAEQSSGIEQVNR
TVAQLDEVTQRNAALVEEATAAARSLEEQAVELADAVSIFRLQSDTRGSSNVVRGSFGSAAA
>Mature_622_residues
MLPTLDAAPASPPPTGRNVARATWTAWLPAAAQAALLILLAVYAATAMPGGFWHTLGTLLPALLVLGAASAGLWWWSRRR
TATQLDQAVTAIAAIGEGRFQRLDARSASGELAPLLRTLQATQDKLALRLDVMEQGLRHGQFVIKALDDLDTMIRIADDD
GQVLFANRKLLKMLKLIEPDVQSFRPSFHAEGFVGGSIGDIYPDSQAAIDRMRALTASKAVRAPFFGRQIDFVYSPIIAA
DGTKLGTIAQWMDVTAQVNAEQALIEIIDAAAAGDFSRRMQMDGMDGVLLSLAQGINRIYDSVETHLAALARVISALAEG
DLTQRVDGDAHGIFARLRDDTNQTVIRLTEIIGGIQTASDTIRRAAVEIAAGNTDLSERTEQQAASLEETASSMEELTST
VKQNADSAQQANKLVLGTGEVAQNGGQVMDDVVSTMSQISTASRRIGEIIGVIDGIAFQTNILALNAAVEAARAGEQGRG
FAVVASEVRALARRSADAAKEIKSLIADSTDKVELGSGLVHRAGATMREIVGSVKHVTDIMSEITSASAEQSSGIEQVNR
TVAQLDEVTQRNAALVEEATAAARSLEEQAVELADAVSIFRLQSDTRGSSNVVRGSFGSAAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=328, Percent_Identity=57.0121951219512, Blast_Score=298, Evalue=5e-82,
Organism=Escherichia coli, GI1787690, Length=296, Percent_Identity=55.0675675675676, Blast_Score=285, Evalue=9e-78,
Organism=Escherichia coli, GI1788195, Length=299, Percent_Identity=57.5250836120401, Blast_Score=283, Evalue=3e-77,
Organism=Escherichia coli, GI1788194, Length=294, Percent_Identity=55.1020408163265, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1789453, Length=251, Percent_Identity=44.2231075697211, Blast_Score=210, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 65961; Mature: 65961

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPTLDAAPASPPPTGRNVARATWTAWLPAAAQAALLILLAVYAATAMPGGFWHTLGTLL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PALLVLGAASAGLWWWSRRRTATQLDQAVTAIAAIGEGRFQRLDARSASGELAPLLRTLQ
HHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH
ATQDKLALRLDVMEQGLRHGQFVIKALDDLDTMIRIADDDGQVLFANRKLLKMLKLIEPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECHHHHHHHHHHCCC
VQSFRPSFHAEGFVGGSIGDIYPDSQAAIDRMRALTASKAVRAPFFGRQIDFVYSPIIAA
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHC
DGTKLGTIAQWMDVTAQVNAEQALIEIIDAAAAGDFSRRMQMDGMDGVLLSLAQGINRIY
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHH
DSVETHLAALARVISALAEGDLTQRVDGDAHGIFARLRDDTNQTVIRLTEIIGGIQTASD
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH
TIRRAAVEIAAGNTDLSERTEQQAASLEETASSMEELTSTVKQNADSAQQANKLVLGTGE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCH
VAQNGGQVMDDVVSTMSQISTASRRIGEIIGVIDGIAFQTNILALNAAVEAARAGEQGRG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FAVVASEVRALARRSADAAKEIKSLIADSTDKVELGSGLVHRAGATMREIVGSVKHVTDI
HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHH
MSEITSASAEQSSGIEQVNRTVAQLDEVTQRNAALVEEATAAARSLEEQAVELADAVSIF
HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQSDTRGSSNVVRGSFGSAAA
HHHCCCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MLPTLDAAPASPPPTGRNVARATWTAWLPAAAQAALLILLAVYAATAMPGGFWHTLGTLL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PALLVLGAASAGLWWWSRRRTATQLDQAVTAIAAIGEGRFQRLDARSASGELAPLLRTLQ
HHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHH
ATQDKLALRLDVMEQGLRHGQFVIKALDDLDTMIRIADDDGQVLFANRKLLKMLKLIEPD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECHHHHHHHHHHCCC
VQSFRPSFHAEGFVGGSIGDIYPDSQAAIDRMRALTASKAVRAPFFGRQIDFVYSPIIAA
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHC
DGTKLGTIAQWMDVTAQVNAEQALIEIIDAAAAGDFSRRMQMDGMDGVLLSLAQGINRIY
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHH
DSVETHLAALARVISALAEGDLTQRVDGDAHGIFARLRDDTNQTVIRLTEIIGGIQTASD
HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH
TIRRAAVEIAAGNTDLSERTEQQAASLEETASSMEELTSTVKQNADSAQQANKLVLGTGE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCH
VAQNGGQVMDDVVSTMSQISTASRRIGEIIGVIDGIAFQTNILALNAAVEAARAGEQGRG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FAVVASEVRALARRSADAAKEIKSLIADSTDKVELGSGLVHRAGATMREIVGSVKHVTDI
HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHH
MSEITSASAEQSSGIEQVNRTVAQLDEVTQRNAALVEEATAAARSLEEQAVELADAVSIF
HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQSDTRGSSNVVRGSFGSAAA
HHHCCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6402709; 7610040; 9278503; 8384293; 6213619; 2033064; 10466731 [H]