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The map label for this gene is yfiO [C]

Identifier: 66767397

GI number: 66767397

Start: 1286640

End: 1287521

Strand: Reverse

Name: yfiO [C]

Synonym: XC_1069

Alternate gene names: 66767397

Gene position: 1287521-1286640 (Counterclockwise)

Preceding gene: 66767402

Following gene: 66767396

Centisome position: 25.01

GC content: 65.76

Gene sequence:

>882_bases
ATGATCCGACGGTCCACGTTTTCCGCGCCTGCGCGCCTGATTGCCCTCATGCTGGTCATGGCGTTTGTCGTCACCGGCTG
CCACCGCGGCGCCAAGGACAAGAATCCCGACGAGGGCATGCCGGTCGAGCAGCTCTACGGCAAGGGCCACGGCCTGATGG
AGAAAGGCAACTGGGCCGGCGCCGAAGCCAGCTACAAGCGCCTGATCGCCCAGTACCCGTATGGCCCGTACACCGAGCAG
GCGATGATCGAAACCGCCTACGCCCAGTACAAGGCCGGCAAGCACGACGACACGGTGTCCAGCGTCGACCGCTTCATCCG
TACCTATCCGACGCACCGCAACATCTCGTATCTGTATTACCTGCGCGGGCTGGCCAACAGCAACCGGGACACGGTGTTCC
TGCGCCGCGTATGGTCGCTGGACCCGAGCCGCCGCGACCTGTCCTCGCCGCAGCAGGCCTACAACGACTTCAACACCGTC
ACCGACCGCTATCCCAACAGCCGCTACGCGCCGGACGCGCGCAAGCGAATGATCGAGCTGCGCGACATCTTCGCCCAGCA
CGAACTGGACAACGCGCTGTATTACCTGCGCCGCGACGCCTGGGTGTCGGCTGCAGGGCGTGCCAACTACCTGCTGGAAA
CCTACCCGCAGAGCGCGTTCCAGTACGACGCAGTCGCCGTGCTGGCCGAGGCCTACACCCACCTGGGCAACAAGACCCTG
GCCGCCGACGCGCGCCGCGTGCTGGAGCTCAACAGCCCGCAGCACCCGTGGCTGACCGGCGACTGGCCGAAGTATCCGTG
GGCCGTGCGCAAGCTCAACCCGTTCGCTGGCGAGAAATCCGCCGCCACCGGCCAGCGCAATGCACAGATGAGTCGCGATT
GA

Upstream 100 bases:

>100_bases
ACCAAGGAATTTGGGGTCCGGGCGGCGGGAGTCAGTCGCCGGACAGGCCACTAGGCTATCATCGCCCTTTCGTTTTCCTG
ACGCGTCCTGCCCAGACCCC

Downstream 100 bases:

>100_bases
GAGATCGATCGGCGATGAGATGAAAGGGGCCGCAAGGCCCCTTTTTTATTGCCGCAACGCTTTATTGCCGCAGCGCCAAC
TGGCAGCGCGACAAGGCGCT

Product: competence lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIRRSTFSAPARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVEQLYGKGHGLMEKGNWAGAEASYKRLIAQYPYGPYTEQ
AMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTV
TDRYPNSRYAPDARKRMIELRDIFAQHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTL
AADARRVLELNSPQHPWLTGDWPKYPWAVRKLNPFAGEKSAATGQRNAQMSRD

Sequences:

>Translated_293_residues
MIRRSTFSAPARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVEQLYGKGHGLMEKGNWAGAEASYKRLIAQYPYGPYTEQ
AMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTV
TDRYPNSRYAPDARKRMIELRDIFAQHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTL
AADARRVLELNSPQHPWLTGDWPKYPWAVRKLNPFAGEKSAATGQRNAQMSRD
>Mature_293_residues
MIRRSTFSAPARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVEQLYGKGHGLMEKGNWAGAEASYKRLIAQYPYGPYTEQ
AMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYYLRGLANSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTV
TDRYPNSRYAPDARKRMIELRDIFAQHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTL
AADARRVLELNSPQHPWLTGDWPKYPWAVRKLNPFAGEKSAATGQRNAQMSRD

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=234, Percent_Identity=33.7606837606838, Blast_Score=148, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33508; Mature: 33508

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRSTFSAPARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVEQLYGKGHGLMEKGNWAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
AEASYKRLIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYY
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
LRGLANSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIEL
HHHHCCCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RDIFAQHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
AADARRVLELNSPQHPWLTGDWPKYPWAVRKLNPFAGEKSAATGQRNAQMSRD
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRRSTFSAPARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVEQLYGKGHGLMEKGNWAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
AEASYKRLIAQYPYGPYTEQAMIETAYAQYKAGKHDDTVSSVDRFIRTYPTHRNISYLYY
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
LRGLANSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTVTDRYPNSRYAPDARKRMIEL
HHHHCCCCCCHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
RDIFAQHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH
AADARRVLELNSPQHPWLTGDWPKYPWAVRKLNPFAGEKSAATGQRNAQMSRD
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]