| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is cysI [H]
Identifier: 66767323
GI number: 66767323
Start: 1188882
End: 1190588
Strand: Reverse
Name: cysI [H]
Synonym: XC_0991
Alternate gene names: 66767323
Gene position: 1190588-1188882 (Counterclockwise)
Preceding gene: 66767324
Following gene: 66767322
Centisome position: 23.12
GC content: 66.26
Gene sequence:
>1707_bases ATGACCCACTCCGTCGAAGACATCAAATCCACCAGCCGCCGCTTGCGCGGGTCGCTGGAGCAGAGCCTGGCCGATCCGGT CACCGGGGCGTTGCGCGAGGACGATCAGACGCTGATCAAATACCACGGCAGCTACCAGCAGGACGACCGCGACATCCGCG ATGAGCGGCGGCGGCAAAAGCTCGAGCCGGCATATCAGTTCATGATCCGCACGCGCACGCCAGGTGGAGTGATTTCGCCC AGCCAGTGGCTGGCACTGGATGGCATCGCCACGCGCTATGCCAACCATTCGCTGCGCATCACCACGCGCCAGGCGTTCCA GTTCCATGGTGTGATCAAGCGCGAGCTCAAGGCCACGATGCAGGCGATCAACGCCACCTTGATCGACACGCTGGCCGCCT GCGGCGATGTGAATCGCAATGTGCAGGTGGCGGCCAACCCGCTGCTGTCGCAGGCGCATGCCACGCTGTATGCCGATGCC GCGCGCGTGTCCGAGCATCTGCTGCCCAACACGCGTGCCTATTACGAGATCTGGCTGGATGAAGAGCGCGTGTCCGGTTC GGGCGCCGAGGACGAACCGATCTATGGCGACCGCTACCTGCCGCGCAAATTCAAGATCGGCTTTGCCGCGCCACCCCATA ACGATGTGGACGTGTTCGCCAACGACCTGGGCTTCATCGCCATCCTGCGCGAGGGCCAGTTGCTCGGCTACAACGTCAGC ATCGGCGGCGGCATGGGCGCCAGCCACGGCGATGCGGAGACCTGGCCGCGCGTGGCCAACGTGATCGGCTTCGTCACCGG CGATCAGTTGCTGGATATCGCCACGGCCGTGGTCACCACCCAGCGCGACCTCGGCAATCGCGCCGTGCGTAAGCGCGCGC GCTTCAAGTACACCATCGACGACCACGGCCTGGACACCATCGTGGCGGAGATCGAACGCCGCGCGGGATTCAGCTTGCAA CCTGCGCAGCCGTTTGCATTCGCGCATAACGGCGACCGCTACGGCTGGGTGGAGGGCGAACAGGGCGATTGGCATCTGAC GCTGTCGCTGCCGGCCGGGCGCATTGCCGACACCGACACCGCCGCGCACCTGAGCGGGCTGCGCGCCATCGCGCAGTTGC AGATGGGCGAGTTCCGCATGACGCCCAATCAGAACCTGGTGATTGCCGGCGTCCCGGCCGAACAGCGCGCGCAGATCGAC CAACTGGTGGCGCAGTACGGCCTGGATGCCGGCAACCTGGCGCCCACCGCGTTGGCGCGCGGCGCGATGGCCTGTGTGGC CTTGCCAACCTGCGGGCTGGCCATGGCCGAGGCCGAGCGCTATCTGCCGGATTTCAGTGCAGCGCTGCAGCCGCTGCTGG AGCGTCACGGGCTGGCGCAGACGCCGATCGTGCTGCGCCTGTCCGGTTGCCCGAACGGCTGTTCGCGGCCGTATCTGGCT GAAATCGCATTGGTCGGCAAGGCACCGGGCCGCTACAACCTCATGCTGGGTGGCGACCGCCGCGGCCAACGCCTGAACAC GCTGTACCGCGAAAACATCAACGAGGCCGACATCCTCGCCGCGCTCGAGCCACTGCTGGCCCGTTACGCAGCAGAGCGCG ACCGACACACCGATGAAGGCTTCGGCGACTTCCTGCATCGCAGCGGCCTGATCGCCCTGCCGCCCTACCCCACCCACCGT CATCTCGACCTGGAATTGCTCGCATGA
Upstream 100 bases:
>100_bases GTGGGGAATCGGGAATGGGTACGGCCTGCACCCGAATTGTCGCGAGCGACCACGCCGCTTTTCACGATTCCCCTTTCCCG ATTCCCGATTCCCGATTCCC
Downstream 100 bases:
>100_bases CCGCGCTGCCTGCCACATCGATCGCCGCTCCTTCGCTGGACGACCTGGACGCGCTCAACGCGCACCTGGAGACGCTGCGC GCCGACGAACGCGTTGCCTG
Product: sulfite reductase subunit beta
Products: NA
Alternate protein names: SiR-HP; SiRHP [H]
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MTHSVEDIKSTSRRLRGSLEQSLADPVTGALREDDQTLIKYHGSYQQDDRDIRDERRRQKLEPAYQFMIRTRTPGGVISP SQWLALDGIATRYANHSLRITTRQAFQFHGVIKRELKATMQAINATLIDTLAACGDVNRNVQVAANPLLSQAHATLYADA ARVSEHLLPNTRAYYEIWLDEERVSGSGAEDEPIYGDRYLPRKFKIGFAAPPHNDVDVFANDLGFIAILREGQLLGYNVS IGGGMGASHGDAETWPRVANVIGFVTGDQLLDIATAVVTTQRDLGNRAVRKRARFKYTIDDHGLDTIVAEIERRAGFSLQ PAQPFAFAHNGDRYGWVEGEQGDWHLTLSLPAGRIADTDTAAHLSGLRAIAQLQMGEFRMTPNQNLVIAGVPAEQRAQID QLVAQYGLDAGNLAPTALARGAMACVALPTCGLAMAEAERYLPDFSAALQPLLERHGLAQTPIVLRLSGCPNGCSRPYLA EIALVGKAPGRYNLMLGGDRRGQRLNTLYRENINEADILAALEPLLARYAAERDRHTDEGFGDFLHRSGLIALPPYPTHR HLDLELLA
Sequences:
>Translated_568_residues MTHSVEDIKSTSRRLRGSLEQSLADPVTGALREDDQTLIKYHGSYQQDDRDIRDERRRQKLEPAYQFMIRTRTPGGVISP SQWLALDGIATRYANHSLRITTRQAFQFHGVIKRELKATMQAINATLIDTLAACGDVNRNVQVAANPLLSQAHATLYADA ARVSEHLLPNTRAYYEIWLDEERVSGSGAEDEPIYGDRYLPRKFKIGFAAPPHNDVDVFANDLGFIAILREGQLLGYNVS IGGGMGASHGDAETWPRVANVIGFVTGDQLLDIATAVVTTQRDLGNRAVRKRARFKYTIDDHGLDTIVAEIERRAGFSLQ PAQPFAFAHNGDRYGWVEGEQGDWHLTLSLPAGRIADTDTAAHLSGLRAIAQLQMGEFRMTPNQNLVIAGVPAEQRAQID QLVAQYGLDAGNLAPTALARGAMACVALPTCGLAMAEAERYLPDFSAALQPLLERHGLAQTPIVLRLSGCPNGCSRPYLA EIALVGKAPGRYNLMLGGDRRGQRLNTLYRENINEADILAALEPLLARYAAERDRHTDEGFGDFLHRSGLIALPPYPTHR HLDLELLA >Mature_567_residues THSVEDIKSTSRRLRGSLEQSLADPVTGALREDDQTLIKYHGSYQQDDRDIRDERRRQKLEPAYQFMIRTRTPGGVISPS QWLALDGIATRYANHSLRITTRQAFQFHGVIKRELKATMQAINATLIDTLAACGDVNRNVQVAANPLLSQAHATLYADAA RVSEHLLPNTRAYYEIWLDEERVSGSGAEDEPIYGDRYLPRKFKIGFAAPPHNDVDVFANDLGFIAILREGQLLGYNVSI GGGMGASHGDAETWPRVANVIGFVTGDQLLDIATAVVTTQRDLGNRAVRKRARFKYTIDDHGLDTIVAEIERRAGFSLQP AQPFAFAHNGDRYGWVEGEQGDWHLTLSLPAGRIADTDTAAHLSGLRAIAQLQMGEFRMTPNQNLVIAGVPAEQRAQIDQ LVAQYGLDAGNLAPTALARGAMACVALPTCGLAMAEAERYLPDFSAALQPLLERHGLAQTPIVLRLSGCPNGCSRPYLAE IALVGKAPGRYNLMLGGDRRGQRLNTLYRENINEADILAALEPLLARYAAERDRHTDEGFGDFLHRSGLIALPPYPTHRH LDLELLA
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate [H]
COG id: COG0155
COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
Organism=Escherichia coli, GI1789122, Length=547, Percent_Identity=48.9945155393053, Blast_Score=552, Evalue=1e-158, Organism=Saccharomyces cerevisiae, GI6322597, Length=578, Percent_Identity=44.8096885813149, Blast_Score=516, Evalue=1e-147,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011786 - InterPro: IPR005117 - InterPro: IPR006067 - InterPro: IPR006066 [H]
Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 62522; Mature: 62391
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS00365 NIR_SIR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSVEDIKSTSRRLRGSLEQSLADPVTGALREDDQTLIKYHGSYQQDDRDIRDERRRQK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHH LEPAYQFMIRTRTPGGVISPSQWLALDGIATRYANHSLRITTRQAFQFHGVIKRELKATM CCHHHHEEEEECCCCCCCCCCHHEEHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHH QAINATLIDTLAACGDVNRNVQVAANPLLSQAHATLYADAARVSEHLLPNTRAYYEIWLD HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC EERVSGSGAEDEPIYGDRYLPRKFKIGFAAPPHNDVDVFANDLGFIAILREGQLLGYNVS HHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEEEEEECCEEEEEEEE IGGGMGASHGDAETWPRVANVIGFVTGDQLLDIATAVVTTQRDLGNRAVRKRARFKYTID ECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC DHGLDTIVAEIERRAGFSLQPAQPFAFAHNGDRYGWVEGEQGDWHLTLSLPAGRIADTDT CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCHH AAHLSGLRAIAQLQMGEFRMTPNQNLVIAGVPAEQRAQIDQLVAQYGLDAGNLAPTALAR HHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHH GAMACVALPTCGLAMAEAERYLPDFSAALQPLLERHGLAQTPIVLRLSGCPNGCSRPYLA HHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEE EIALVGKAPGRYNLMLGGDRRGQRLNTLYRENINEADILAALEPLLARYAAERDRHTDEG EEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH FGDFLHRSGLIALPPYPTHRHLDLELLA HHHHHHHCCEEEECCCCCCCCCEEEEEC >Mature Secondary Structure THSVEDIKSTSRRLRGSLEQSLADPVTGALREDDQTLIKYHGSYQQDDRDIRDERRRQK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHH LEPAYQFMIRTRTPGGVISPSQWLALDGIATRYANHSLRITTRQAFQFHGVIKRELKATM CCHHHHEEEEECCCCCCCCCCHHEEHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHH QAINATLIDTLAACGDVNRNVQVAANPLLSQAHATLYADAARVSEHLLPNTRAYYEIWLD HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC EERVSGSGAEDEPIYGDRYLPRKFKIGFAAPPHNDVDVFANDLGFIAILREGQLLGYNVS HHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCEEEEEECCEEEEEEEE IGGGMGASHGDAETWPRVANVIGFVTGDQLLDIATAVVTTQRDLGNRAVRKRARFKYTID ECCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC DHGLDTIVAEIERRAGFSLQPAQPFAFAHNGDRYGWVEGEQGDWHLTLSLPAGRIADTDT CCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCHH AAHLSGLRAIAQLQMGEFRMTPNQNLVIAGVPAEQRAQIDQLVAQYGLDAGNLAPTALAR HHHHHHHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHH GAMACVALPTCGLAMAEAERYLPDFSAALQPLLERHGLAQTPIVLRLSGCPNGCSRPYLA HHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEE EIALVGKAPGRYNLMLGGDRRGQRLNTLYRENINEADILAALEPLLARYAAERDRHTDEG EEEEEECCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH FGDFLHRSGLIALPPYPTHRHLDLELLA HHHHHHHCCEEEECCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]