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The map label for this gene is ompW [H]

Identifier: 66767302

GI number: 66767302

Start: 1163065

End: 1163688

Strand: Reverse

Name: ompW [H]

Synonym: XC_0970

Alternate gene names: 66767302

Gene position: 1163688-1163065 (Counterclockwise)

Preceding gene: 66767303

Following gene: 66767301

Centisome position: 22.6

GC content: 65.38

Gene sequence:

>624_bases
ATGCGCAAGCGTTCCACTCTTCTGTTCGCAGCCCTGGCTGCCGCCTCGGTCAGCGCACCCGCACTGGCCCAATCCAAGGG
TGACTGGTTGCTGGGCGTCGGCGCCCATCAGGTGGCGCCCAAGTCCGACAACGGCAGCCTGGCCGGCGGTACGCTCGACG
TGGATGTCGGCACCGATATCCGCCCGACCATCACCGCCGAATACTTCATCGCCGACAACTGGGGCATCGAGGTGCTGGCG
GCACTGCCATTCGAGCACGACATCAACATCCGTGGCCTGGGCCGCGTGGGCAGCACCAAGCACCTGCCGCCGGTGGTCAG
CTTGCAGTACCACTTCAACAGCCAGGGCAAGGTGTCGCCATTTGTCGGCGCGGGCATCAACTACACGCGCTTTTTCAGCA
CCGAAACCAGCGGCGCACTGGCCGGCAATGACCTGCACCTGGATGCCTCCTGGGGCCTGGCGGCACATGCGGGCCTGGAC
GTGAAGATCAGCGACCGCGGCGCTTTGCGCGTGGACCTGCGCTGGATCGACATCGACAGCGACGCCAGCCTCAATGGCAA
CCGTATCGGCACGGTCAACATCGACCCGCTGGTCTACGGCGTGGCGTACGTGCACCGGTTCTGA

Upstream 100 bases:

>100_bases
CGCCGTCACTGCATGCGCTGCACCTGATTGATCAGGATCAAGGCAGCAACGGCGCGCACGTTCAAGACTTCGCTCACTCC
TACAACGACACGAGACCCTC

Downstream 100 bases:

>100_bases
GGACGGCGACGCGCGTGGCGCTTCTCTGGCACACTTGACGCCCAGGGACGTGAATCCACCGCCGGAGTTGCGGACAGGTA
GGTGCACGTCGACCGCCTGT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRKRSTLLFAALAAASVSAPALAQSKGDWLLGVGAHQVAPKSDNGSLAGGTLDVDVGTDIRPTITAEYFIADNWGIEVLA
ALPFEHDINIRGLGRVGSTKHLPPVVSLQYHFNSQGKVSPFVGAGINYTRFFSTETSGALAGNDLHLDASWGLAAHAGLD
VKISDRGALRVDLRWIDIDSDASLNGNRIGTVNIDPLVYGVAYVHRF

Sequences:

>Translated_207_residues
MRKRSTLLFAALAAASVSAPALAQSKGDWLLGVGAHQVAPKSDNGSLAGGTLDVDVGTDIRPTITAEYFIADNWGIEVLA
ALPFEHDINIRGLGRVGSTKHLPPVVSLQYHFNSQGKVSPFVGAGINYTRFFSTETSGALAGNDLHLDASWGLAAHAGLD
VKISDRGALRVDLRWIDIDSDASLNGNRIGTVNIDPLVYGVAYVHRF
>Mature_207_residues
MRKRSTLLFAALAAASVSAPALAQSKGDWLLGVGAHQVAPKSDNGSLAGGTLDVDVGTDIRPTITAEYFIADNWGIEVLA
ALPFEHDINIRGLGRVGSTKHLPPVVSLQYHFNSQGKVSPFVGAGINYTRFFSTETSGALAGNDLHLDASWGLAAHAGLD
VKISDRGALRVDLRWIDIDSDASLNGNRIGTVNIDPLVYGVAYVHRF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=215, Percent_Identity=33.953488372093, Blast_Score=110, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 21978; Mature: 21978

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRSTLLFAALAAASVSAPALAQSKGDWLLGVGAHQVAPKSDNGSLAGGTLDVDVGTDI
CCCCHHEEEEEHHHHCCCCCCCCCCCCCEEEEECCHHCCCCCCCCCEECCEEEEECCCCC
RPTITAEYFIADNWGIEVLAALPFEHDINIRGLGRVGSTKHLPPVVSLQYHFNSQGKVSP
CCEEEEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCC
FVGAGINYTRFFSTETSGALAGNDLHLDASWGLAAHAGLDVKISDRGALRVDLRWIDIDS
EECCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEECCEEEEECCCCEEEEEEEEEEECC
DASLNGNRIGTVNIDPLVYGVAYVHRF
CCCCCCCEEEEEEECHHHEEEEHEECC
>Mature Secondary Structure
MRKRSTLLFAALAAASVSAPALAQSKGDWLLGVGAHQVAPKSDNGSLAGGTLDVDVGTDI
CCCCHHEEEEEHHHHCCCCCCCCCCCCCEEEEECCHHCCCCCCCCCEECCEEEEECCCCC
RPTITAEYFIADNWGIEVLAALPFEHDINIRGLGRVGSTKHLPPVVSLQYHFNSQGKVSP
CCEEEEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCC
FVGAGINYTRFFSTETSGALAGNDLHLDASWGLAAHAGLDVKISDRGALRVDLRWIDIDS
EECCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEECCEEEEECCCCEEEEEEEEEEECC
DASLNGNRIGTVNIDPLVYGVAYVHRF
CCCCCCCEEEEEEECHHHEEEEHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2336399; 10952301 [H]