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The map label for this gene is ompW [C]

Identifier: 66767301

GI number: 66767301

Start: 1162331

End: 1162945

Strand: Reverse

Name: ompW [C]

Synonym: XC_0969

Alternate gene names: 66767301

Gene position: 1162945-1162331 (Counterclockwise)

Preceding gene: 66767302

Following gene: 66767299

Centisome position: 22.59

GC content: 63.09

Gene sequence:

>615_bases
ATGAGCACGCTTATCCGCACCGCCCTCGCCATCGCTTTGGCCGCTTCGGCCACTCCTGCTTTTGCCCAGTCGGCCGGCCA
TTGGACGACCGGCTATGGCGCGGGATATGTCTCGCCCAAGTCCGAAAGCGGCGACTTCGCTGGCGTCCGCGGCGAAATCA
AGGGCGCGCCCGCGCTGTCGTTCACCTACGAATATTTCCTGCGCAACAACCTCGGCATCGAGGTGCACGCCGCCGTCTCG
GGCAAGCACGACCTGGAGCTTGCGGGTGTCGGCAAGGTGGGCAGCTACTGGTCGGTGCCGCCGAGCGTGCTGTTGCAGTA
CCACATCAACGGCTATGGCACGGTGTCGCCCTTCGTGGGCGTGGGCATCAACTACACCACCTTCCTGGGTGAAGACACAG
ACGAAGCGCTGGGCAGTGGCGATATCCGCTTCGACGATTCGGTGGGCGCCACCGCGCACGTGGGTGTGGACTTCATCTTC
AATGAGCGCAGCGGCCTGCGTGTGGATGCACGCTGGACCGATTCGTCCAGCAACGTCGATTTCAACGGCACCCGCCTGGG
CAAGGCGCAGATCGATCCGCTGACCTATGGCGTGTCGTACCTGGTCTATTTCTAA

Upstream 100 bases:

>100_bases
GCTTCTCTGGCACACTTGACGCCCAGGGACGTGAATCCACCGCCGGAGTTGCGGACAGGTAGGTGCACGTCGACCGCCTG
TCCGACTTACCGGGGATTCC

Downstream 100 bases:

>100_bases
GAACAGCAATCAAAACGACTGCGCGCCCGCCAGGCGGGGGCGGCCTGTGCTCGGAATCAGCATGTACCCCCCGTACACCC
CGGTTCCTCCGCGCCGTCCG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSTLIRTALAIALAASATPAFAQSAGHWTTGYGAGYVSPKSESGDFAGVRGEIKGAPALSFTYEYFLRNNLGIEVHAAVS
GKHDLELAGVGKVGSYWSVPPSVLLQYHINGYGTVSPFVGVGINYTTFLGEDTDEALGSGDIRFDDSVGATAHVGVDFIF
NERSGLRVDARWTDSSSNVDFNGTRLGKAQIDPLTYGVSYLVYF

Sequences:

>Translated_204_residues
MSTLIRTALAIALAASATPAFAQSAGHWTTGYGAGYVSPKSESGDFAGVRGEIKGAPALSFTYEYFLRNNLGIEVHAAVS
GKHDLELAGVGKVGSYWSVPPSVLLQYHINGYGTVSPFVGVGINYTTFLGEDTDEALGSGDIRFDDSVGATAHVGVDFIF
NERSGLRVDARWTDSSSNVDFNGTRLGKAQIDPLTYGVSYLVYF
>Mature_203_residues
STLIRTALAIALAASATPAFAQSAGHWTTGYGAGYVSPKSESGDFAGVRGEIKGAPALSFTYEYFLRNNLGIEVHAAVSG
KHDLELAGVGKVGSYWSVPPSVLLQYHINGYGTVSPFVGVGINYTTFLGEDTDEALGSGDIRFDDSVGATAHVGVDFIFN
ERSGLRVDARWTDSSSNVDFNGTRLGKAQIDPLTYGVSYLVYF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=211, Percent_Identity=28.436018957346, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 21634; Mature: 21503

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLIRTALAIALAASATPAFAQSAGHWTTGYGAGYVSPKSESGDFAGVRGEIKGAPALS
CCHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEH
FTYEYFLRNNLGIEVHAAVSGKHDLELAGVGKVGSYWSVPPSVLLQYHINGYGTVSPFVG
EEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHEEEEEECCCCCCCCCEE
VGINYTTFLGEDTDEALGSGDIRFDDSVGATAHVGVDFIFNERSGLRVDARWTDSSSNVD
CCCCEEEEECCCCHHHCCCCCEEECCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCC
FNGTRLGKAQIDPLTYGVSYLVYF
CCCEEECCEECCHHHCCEEEEEEC
>Mature Secondary Structure 
STLIRTALAIALAASATPAFAQSAGHWTTGYGAGYVSPKSESGDFAGVRGEIKGAPALS
CHHHHHHHHHHHHCCCCCHHHHCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCEEH
FTYEYFLRNNLGIEVHAAVSGKHDLELAGVGKVGSYWSVPPSVLLQYHINGYGTVSPFVG
EEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHEEEEEECCCCCCCCCEE
VGINYTTFLGEDTDEALGSGDIRFDDSVGATAHVGVDFIFNERSGLRVDARWTDSSSNVD
CCCCEEEEECCCCHHHCCCCCEEECCCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCC
FNGTRLGKAQIDPLTYGVSYLVYF
CCCEEECCEECCHHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]