| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767263
Identifier: 66767263
GI number: 66767263
Start: 1117497
End: 1119236
Strand: Reverse
Name: 66767263
Synonym: XC_0931
Alternate gene names: NA
Gene position: 1119236-1117497 (Counterclockwise)
Preceding gene: 66767264
Following gene: 66767262
Centisome position: 21.74
GC content: 70.63
Gene sequence:
>1740_bases ATGACGGGCAACGGGCACTGGCGCCGTGTGGCGATATGGCTGCTGAGCAGCAGCGTGGCGATCCTGGCGTTGCCCGCCGG CGCGGTGACGCGCGCCTGGCTGGACCGTGACAGCATCGATGCGGGCGATGCGGTGACCTTGAACATCGAGACCGACCAGC GCGGCGCCGAGCCCGATTACAGCCCGTTGCGCGGTGGGTTCGGGCTGGGGGCCAAGAACGCCAACCAGCAGATGCAGGTG ACCAATGGTTCGGTGACCATCCGGGCGTTGTTCGGGGTGGTGATCACGCCACGCCAGACTGGCGAGATCATCGTGCCGGC GATCCGGGTGGGCAACGAGCGCACCGAGCCGCTTCGGCTGCAGGTGGTGGCTACGGCTGTCGATGCCGGCGCTCCGGGGG ACGCTGGCGCAAGCGCGGCGCGAGGCAACGAAGAAGCGTTCGTCGAAACCCAGGTGGACGACCCGCAGCCCTACGTGCAG CAGAGCGTGGGCGTGGTGGTGCGGCTGTACTACGCCACCCAGCTGGCCTCTGGCGAACTGGATCTGCAAGCCCCGGACGG CGCGTCGCTGCAGCGCGTTGGCGATGATGTGAGTTCGGCCAGGGCGGTCAACGGGCGGCAGTACAACGTGGTGGAGCGGC GCTACCTGCTGGTTCCCGAGCGCAGCGGCCGCCTGGTGGTGCCGCCGGCCCGCTTCAACGGGCGCGCGGTGGGTGGGTTC TTCGACGATTATTTCGGGCGCGGCAATGGCGAATTGAACGCGCGCAGCGCCAGCATTCCGCTGCAGGTACGCGCGCAGCC GGCCAATGCGCCGCAGCCGTGGTTGCCGTTGCGCAGCCTGACGCTGCGCTACACCTCCACGCCGCAGCGGGCCACCGCCG GCGAGGCAGCGCAAATCGTGGTGGAAGCCAGCGCACGCGGCGCCACCCAGGCACAGTTCCCGGAGCTGCCGACGCCCAGC GTGCCGGACGCGCAAGTGTTTGCCGAACCGGCGCAGTACGAGGAGCGGTTTGTCGATGGCTCGCCACAGCTGCGGCTGAC GCGGCGCTATTCGATCGTGCCCAATCGCGCAGGTCCTCTGTTGATTCCCGGCCTGCAGGTGGCGTGGTGGGATGTGGGCG CGGCAGCGGCGAAGACGGCATCGCTGCCGGACCTCACGCTGGATGTGGCCGCACGCAGCGCTGCATTTGCAGCGCCCGCA GCGGCGCCTTCGCCAGCCAGCCAGCCAGCTGGTGAGGCCGTGGCACCTGCGCCGGCGGCCAGCACGCTGCGCCTGCAGGG TGCCCCTGCAGCCTCGCGCCCGTGGGGCTGGATCGCGGCGGCGGCGGGTTTCGCGGTGCTGTGGATTGCCACTCTGGTCT GGGCGCTGCGTCGTCGTCGCGGTGGAGTGCGCGCTGTGGCCGCGGGTGCTGGTGCTGCTGCGCCGGCGCCCGGCAGGCGC GGCACCCACAGCGTGGCCGACCTGCGCCGTGCGCTCGATACCGGTGGCATGGACGATGTGGCCACGGTGCTGTGTGGTAT GGCCGGCGTTGCCGACATCGACAGTGTGCTGGCAGCCTTGAGCGACCCGGCTCAGCGCGCGGCGGTGGCACAGATGCAAC GCGCCCGTTGGGGTGGCGATGGCGATGTGACTGCTGCGCGCGCTGCCTTGCGCGAGGCGTTCGCCAATGGCCCGCGCTGG CATCACGCCACGGCAGCAGAGCCGGAGGTGCTGGCACCGCTCTATCCGCCGGCGCATTGA
Upstream 100 bases:
>100_bases AGGCGGTGGATGCATGGATCCGGCGCGTGCCGGATGATCCGGGCAGCCTGTTGCGCGCCAAATTCAGGCTGGAACACGAA CGCAGGCAACGGGACGGACA
Downstream 100 bases:
>100_bases TTGCTTGCGCTGCCGCGACAGCGACACGACAGACGAGCCACGGCAAGGTTAAGTCGGGTGCGCAGGACCCGGCCGCTGCC AGCGCTGCTGCGTGGTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MTGNGHWRRVAIWLLSSSVAILALPAGAVTRAWLDRDSIDAGDAVTLNIETDQRGAEPDYSPLRGGFGLGAKNANQQMQV TNGSVTIRALFGVVITPRQTGEIIVPAIRVGNERTEPLRLQVVATAVDAGAPGDAGASAARGNEEAFVETQVDDPQPYVQ QSVGVVVRLYYATQLASGELDLQAPDGASLQRVGDDVSSARAVNGRQYNVVERRYLLVPERSGRLVVPPARFNGRAVGGF FDDYFGRGNGELNARSASIPLQVRAQPANAPQPWLPLRSLTLRYTSTPQRATAGEAAQIVVEASARGATQAQFPELPTPS VPDAQVFAEPAQYEERFVDGSPQLRLTRRYSIVPNRAGPLLIPGLQVAWWDVGAAAAKTASLPDLTLDVAARSAAFAAPA AAPSPASQPAGEAVAPAPAASTLRLQGAPAASRPWGWIAAAAGFAVLWIATLVWALRRRRGGVRAVAAGAGAAAPAPGRR GTHSVADLRRALDTGGMDDVATVLCGMAGVADIDSVLAALSDPAQRAAVAQMQRARWGGDGDVTAARAALREAFANGPRW HHATAAEPEVLAPLYPPAH
Sequences:
>Translated_579_residues MTGNGHWRRVAIWLLSSSVAILALPAGAVTRAWLDRDSIDAGDAVTLNIETDQRGAEPDYSPLRGGFGLGAKNANQQMQV TNGSVTIRALFGVVITPRQTGEIIVPAIRVGNERTEPLRLQVVATAVDAGAPGDAGASAARGNEEAFVETQVDDPQPYVQ QSVGVVVRLYYATQLASGELDLQAPDGASLQRVGDDVSSARAVNGRQYNVVERRYLLVPERSGRLVVPPARFNGRAVGGF FDDYFGRGNGELNARSASIPLQVRAQPANAPQPWLPLRSLTLRYTSTPQRATAGEAAQIVVEASARGATQAQFPELPTPS VPDAQVFAEPAQYEERFVDGSPQLRLTRRYSIVPNRAGPLLIPGLQVAWWDVGAAAAKTASLPDLTLDVAARSAAFAAPA AAPSPASQPAGEAVAPAPAASTLRLQGAPAASRPWGWIAAAAGFAVLWIATLVWALRRRRGGVRAVAAGAGAAAPAPGRR GTHSVADLRRALDTGGMDDVATVLCGMAGVADIDSVLAALSDPAQRAAVAQMQRARWGGDGDVTAARAALREAFANGPRW HHATAAEPEVLAPLYPPAH >Mature_578_residues TGNGHWRRVAIWLLSSSVAILALPAGAVTRAWLDRDSIDAGDAVTLNIETDQRGAEPDYSPLRGGFGLGAKNANQQMQVT NGSVTIRALFGVVITPRQTGEIIVPAIRVGNERTEPLRLQVVATAVDAGAPGDAGASAARGNEEAFVETQVDDPQPYVQQ SVGVVVRLYYATQLASGELDLQAPDGASLQRVGDDVSSARAVNGRQYNVVERRYLLVPERSGRLVVPPARFNGRAVGGFF DDYFGRGNGELNARSASIPLQVRAQPANAPQPWLPLRSLTLRYTSTPQRATAGEAAQIVVEASARGATQAQFPELPTPSV PDAQVFAEPAQYEERFVDGSPQLRLTRRYSIVPNRAGPLLIPGLQVAWWDVGAAAAKTASLPDLTLDVAARSAAFAAPAA APSPASQPAGEAVAPAPAASTLRLQGAPAASRPWGWIAAAAGFAVLWIATLVWALRRRRGGVRAVAAGAGAAAPAPGRRG THSVADLRRALDTGGMDDVATVLCGMAGVADIDSVLAALSDPAQRAAVAQMQRARWGGDGDVTAARAALREAFANGPRWH HATAAEPEVLAPLYPPAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60573; Mature: 60441
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGNGHWRRVAIWLLSSSVAILALPAGAVTRAWLDRDSIDAGDAVTLNIETDQRGAEPDY CCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC SPLRGGFGLGAKNANQQMQVTNGSVTIRALFGVVITPRQTGEIIVPAIRVGNERTEPLRL CCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCEEE QVVATAVDAGAPGDAGASAARGNEEAFVETQVDDPQPYVQQSVGVVVRLYYATQLASGEL EEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHEEEEHHHHHCCCCE DLQAPDGASLQRVGDDVSSARAVNGRQYNVVERRYLLVPERSGRLVVPPARFNGRAVGGF EEECCCCCHHHHHCCCHHHHHHCCCCEEEEEEEEEEEEECCCCCEEECCCCCCCEEECCH FDDYFGRGNGELNARSASIPLQVRAQPANAPQPWLPLRSLTLRYTSTPQRATAGEAAQIV HHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEE VEASARGATQAQFPELPTPSVPDAQVFAEPAQYEERFVDGSPQLRLTRRYSIVPNRAGPL EEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCE LIPGLQVAWWDVGAAAAKTASLPDLTLDVAARSAAFAAPAAAPSPASQPAGEAVAPAPAA EECCCEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC STLRLQGAPAASRPWGWIAAAAGFAVLWIATLVWALRRRRGGVRAVAAGAGAAAPAPGRR CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC GTHSVADLRRALDTGGMDDVATVLCGMAGVADIDSVLAALSDPAQRAAVAQMQRARWGGD CCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC GDVTAARAALREAFANGPRWHHATAAEPEVLAPLYPPAH CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC >Mature Secondary Structure TGNGHWRRVAIWLLSSSVAILALPAGAVTRAWLDRDSIDAGDAVTLNIETDQRGAEPDY CCCCCEEEEEEEEECCCEEEEEECCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC SPLRGGFGLGAKNANQQMQVTNGSVTIRALFGVVITPRQTGEIIVPAIRVGNERTEPLRL CCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCEEE QVVATAVDAGAPGDAGASAARGNEEAFVETQVDDPQPYVQQSVGVVVRLYYATQLASGEL EEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHEEEEHHHHHCCCCE DLQAPDGASLQRVGDDVSSARAVNGRQYNVVERRYLLVPERSGRLVVPPARFNGRAVGGF EEECCCCCHHHHHCCCHHHHHHCCCCEEEEEEEEEEEEECCCCCEEECCCCCCCEEECCH FDDYFGRGNGELNARSASIPLQVRAQPANAPQPWLPLRSLTLRYTSTPQRATAGEAAQIV HHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEE VEASARGATQAQFPELPTPSVPDAQVFAEPAQYEERFVDGSPQLRLTRRYSIVPNRAGPL EEECCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCCE LIPGLQVAWWDVGAAAAKTASLPDLTLDVAARSAAFAAPAAAPSPASQPAGEAVAPAPAA EECCCEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC STLRLQGAPAASRPWGWIAAAAGFAVLWIATLVWALRRRRGGVRAVAAGAGAAAPAPGRR CEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC GTHSVADLRRALDTGGMDDVATVLCGMAGVADIDSVLAALSDPAQRAAVAQMQRARWGGD CCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC GDVTAARAALREAFANGPRWHHATAAEPEVLAPLYPPAH CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA