BacMap

Definition	Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession	NC_007086
Length	5,148,708

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The map label for this gene is fabG [H]

Identifier: 66767254

GI number: 66767254

Start: 1106044

End: 1106874

Strand: Reverse

Name: fabG [H]

Synonym: XC_0922

Alternate gene names: 66767254

Gene position: 1106874-1106044 (Counterclockwise)

Preceding gene: 66767256

Following gene: 66767248

Centisome position: 21.5

GC content: 65.7

Gene sequence:

>831_bases
ATGTGGCGATTTATGTCATGCCGCAAGGCTAATAGCCTGCGTCCTGTCCATTCACTCGCGGAGCACGGCATGCACAGCAC
CACACCCATCACCCTGATCACCGGCGGCAGCCGCGGCCTGGGCCGCAACGCCGCACACGCACTGGCCGCCGCCGGCCACG
ACATCGTGCTGACCTATCACCGCCAGGCCGACGACGCGGCCGCAGCGGTGGCCCACATCCAGCAACTGGGCCGCCGCGCG
CATGCGCTGCAACTCGATACCGCAGACGTGTCCACGTTTGCCGACTTTGCTGCGCGGCTCAAAGACGTGCTGGCCAGTTG
GGAGCGGAACCAGTTCGATGCGCTGGTCAATAACGCCGGCACCGGCTTGCACGCGCCCATCGCCGACACCACCGCGGACC
AATTCGATGCGCTGGTGAACATCCATCTGAAAGGGCCGTATTTCCTGACCCAGACCCTGTTGCCGTTGATTGCCGACGGC
GGGCGCATTCTCAATGTCTCGAGTGGTCTGGCGCGTTTCGCGCTGCCGGGGTCTTCGGCCTACGCCATGATGAAGGGAGG
CATCGAAGTGTTTACGCGTTACCTGGCCAAGGAGCTCGGCGCACGCGGTATTTCCGCCAACACCCTGGCGCCGGGCGCGA
TCGAAACCGACTTCAATGGCGGCAGCGTGCGCGACAACGCGCAGGTGAACGCGATGGTGGCCTCGGTCACCGCATTGGGC
CGGCCGGGGCAGCCGGACGATATCGGCCCGGTGGTCGCCGCGCTACTTGCGCCCGGCACGGCGTGGATCAATGCGCAGCG
GATCGAGGCATCCGGCGGCATGCTGATCTGA

Upstream 100 bases:

>100_bases
GGCACGGGTGAAGCTGCCGAGCTCGGCAACGCGCAGGAAGGCGCGGAGCGTGTCCATTGTGTCCATGGATTGGTCGCTGA
GAGTGAACGGTGCAATCAGG

Downstream 100 bases:

>100_bases
GGATCACTGCCGTGCCTTCACTGCGCTGATGTGCCCATGCTGCACATCGGCGCAGGTGGGGGCTAGCAGCGGCTTTAGGT
GTTGAGTGATGGGGCCGAGC

Product: reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MWRFMSCRKANSLRPVHSLAEHGMHSTTPITLITGGSRGLGRNAAHALAAAGHDIVLTYHRQADDAAAAVAHIQQLGRRA
HALQLDTADVSTFADFAARLKDVLASWERNQFDALVNNAGTGLHAPIADTTADQFDALVNIHLKGPYFLTQTLLPLIADG
GRILNVSSGLARFALPGSSAYAMMKGGIEVFTRYLAKELGARGISANTLAPGAIETDFNGGSVRDNAQVNAMVASVTALG
RPGQPDDIGPVVAALLAPGTAWINAQRIEASGGMLI

Sequences:

>Translated_276_residues
MWRFMSCRKANSLRPVHSLAEHGMHSTTPITLITGGSRGLGRNAAHALAAAGHDIVLTYHRQADDAAAAVAHIQQLGRRA
HALQLDTADVSTFADFAARLKDVLASWERNQFDALVNNAGTGLHAPIADTTADQFDALVNIHLKGPYFLTQTLLPLIADG
GRILNVSSGLARFALPGSSAYAMMKGGIEVFTRYLAKELGARGISANTLAPGAIETDFNGGSVRDNAQVNAMVASVTALG
RPGQPDDIGPVVAALLAPGTAWINAQRIEASGGMLI
>Mature_276_residues
MWRFMSCRKANSLRPVHSLAEHGMHSTTPITLITGGSRGLGRNAAHALAAAGHDIVLTYHRQADDAAAAVAHIQQLGRRA
HALQLDTADVSTFADFAARLKDVLASWERNQFDALVNNAGTGLHAPIADTTADQFDALVNIHLKGPYFLTQTLLPLIADG
GRILNVSSGLARFALPGSSAYAMMKGGIEVFTRYLAKELGARGISANTLAPGAIETDFNGGSVRDNAQVNAMVASVTALG
RPGQPDDIGPVVAALLAPGTAWINAQRIEASGGMLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=278, Percent_Identity=27.6978417266187, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI15277342, Length=259, Percent_Identity=28.1853281853282, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=25.4901960784314, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI20149619, Length=220, Percent_Identity=28.1818181818182, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI44680136, Length=183, Percent_Identity=27.8688524590164, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI44680133, Length=183, Percent_Identity=27.8688524590164, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI17738292, Length=183, Percent_Identity=27.8688524590164, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=25.3061224489796, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI150247226, Length=195, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI40254992, Length=252, Percent_Identity=27.3809523809524, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI7706318, Length=213, Percent_Identity=25.8215962441315, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1788459, Length=250, Percent_Identity=29.2, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=30.8943089430894, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=30.7053941908714, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787335, Length=255, Percent_Identity=29.0196078431373, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI2367175, Length=254, Percent_Identity=30.3149606299213, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=30.4, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=31.5789473684211, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=29.4820717131474, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=27.6, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=24.1935483870968, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786701, Length=192, Percent_Identity=31.7708333333333, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787820, Length=228, Percent_Identity=23.6842105263158, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=26.5060240963855, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=254, Percent_Identity=27.1653543307087, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=29.3650793650794, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17562910, Length=258, Percent_Identity=27.906976744186, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=30, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17555706, Length=271, Percent_Identity=26.1992619926199, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=253, Percent_Identity=29.6442687747036, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=248, Percent_Identity=29.8387096774194, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=255, Percent_Identity=29.0196078431373, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=29.9242424242424, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=258, Percent_Identity=29.8449612403101, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=253, Percent_Identity=28.4584980237154, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=258, Percent_Identity=30.2325581395349, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=28.4090909090909, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=30.1158301158301, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=28.4090909090909, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=23.6, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=23.9837398373984, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17536651, Length=279, Percent_Identity=23.2974910394265, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=27.8625954198473, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17507613, Length=193, Percent_Identity=31.6062176165803, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=193, Percent_Identity=31.6062176165803, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=281, Percent_Identity=22.0640569395018, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=26.2548262548263, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=258, Percent_Identity=29.4573643410853, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=28.0155642023346, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=242, Percent_Identity=30.1652892561983, Blast_Score=66, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6324126, Length=247, Percent_Identity=24.2914979757085, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=29.6, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI21357041, Length=248, Percent_Identity=32.258064516129, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=28.6290322580645, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=28.740157480315, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=31.0483870967742, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=27.6, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI23397609, Length=260, Percent_Identity=28.8461538461538, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21358495, Length=236, Percent_Identity=28.3898305084746, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24651139, Length=199, Percent_Identity=30.1507537688442, Blast_Score=78, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 28950; Mature: 28950

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRFMSCRKANSLRPVHSLAEHGMHSTTPITLITGGSRGLGRNAAHALAAAGHDIVLTYH
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEEEE
RQADDAAAAVAHIQQLGRRAHALQLDTADVSTFADFAARLKDVLASWERNQFDALVNNAG
CCCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
TGLHAPIADTTADQFDALVNIHLKGPYFLTQTLLPLIADGGRILNVSSGLARFALPGSSA
CCCCCCCCCCCHHHHHEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHEECCCCCH
YAMMKGGIEVFTRYLAKELGARGISANTLAPGAIETDFNGGSVRDNAQVNAMVASVTALG
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCC
RPGQPDDIGPVVAALLAPGTAWINAQRIEASGGMLI
CCCCCCHHHHHHHHHHCCCHHEEEEEEEECCCCCCC
>Mature Secondary Structure
MWRFMSCRKANSLRPVHSLAEHGMHSTTPITLITGGSRGLGRNAAHALAAAGHDIVLTYH
CCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEEEE
RQADDAAAAVAHIQQLGRRAHALQLDTADVSTFADFAARLKDVLASWERNQFDALVNNAG
CCCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
TGLHAPIADTTADQFDALVNIHLKGPYFLTQTLLPLIADGGRILNVSSGLARFALPGSSA
CCCCCCCCCCCHHHHHEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCHHEECCCCCH
YAMMKGGIEVFTRYLAKELGARGISANTLAPGAIETDFNGGSVRDNAQVNAMVASVTALG
HHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCC
RPGQPDDIGPVVAALLAPGTAWINAQRIEASGGMLI
CCCCCCHHHHHHHHHHCCCHHEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9384377; 9534248; 8654983 [H]