| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is fhuE [H]
Identifier: 66767256
GI number: 66767256
Start: 1108114
End: 1109634
Strand: Reverse
Name: fhuE [H]
Synonym: XC_0924
Alternate gene names: 66767256
Gene position: 1109634-1108114 (Counterclockwise)
Preceding gene: 66767257
Following gene: 66767254
Centisome position: 21.55
GC content: 62.52
Gene sequence:
>1521_bases GTGCGCGCACGTGTGATCGGCGTCTACCAGGACGGCGAATCGGACATGGACCGCTACAACCTGCGCAAGAAGATCGGCTC GGCGATCATTGATGCCGACCTCACCGACAGCACGCTGCTGAGCGTGGGCTACGAGTACCAGAAGAAGGAATCGGACGACG TCACCTGGGGCGGCTTCCCGCTGTTCTTCAGCGACGGCACGCGCACCAATTACGACCGCTCGTTCAATCCGGCCGCCGAT TGGACGTTCTGGGATACGCGTCTGCAGCGCACCTTCGCCAGCCTGCAGCAGGGCTTCGACAACGGCTGGACGCTCAAGGC CAATGTCAGCCATGAGAAGACCGAAGCGGCCAATCATCTGTTCTATCCGTTCTATACGATTTTCGGTTTCGACCGCGCCA CCGGCGGCGGCGTGGTGCCGTATTCGGGTAACTACCTCACCGAGCGCAAGGCCGACGGCGCCGACGTGTACGCGGAAGGC CCGTTCCAGCTGTTTGGCCGCGAGCATCACCTGGTCGCCGGCGCCAGTTACAACCGCCGCGAATTCACCAACAACGGCAC CTTCGATTTCCCGGCGCCGCTGGATACTTACTTCGGCTGGAATGGCGCGTATCCGGAACCCAACTGGAGCCCGCGCACGG TGCAGAGCACCGGCACGATCAAGCAAAAAGCCGCCTACGTGGCGGGCCGTTTCTCGCTGGCCGACCCGCTGACGCTGCTG GTGGGCGCGCGCTACACCGACTGGCAGATCGATGGTGGTAACTTCGATGCCGCGCAGGGGCTTGTACCGTTCTCCGACAC CCAGACCGAAGTCACCCCGTACGCCGGCCTGGTCTACGACATCAACGACGTGTGGTCCACCTACGTCAGCTACACCGAAA TCTTCAACCCGCAGACCTTGCGCGATGCCAACGGCGGCTACCTGGATCCGTTGACCGGCAAGGGCTACGAAGCCGGCGTC AAGGCTGCCTGGTTCGACGACAAGCTCAACGCCTCGCTTGCGGTGTTCCGCATCGAACAAGACAACCTGGGCGTGGCCAC CGGCGGCTTCGTTCCCGGTAGCAGTGAATCGGCGTATGAGGCCGCCAACGGCGTGGTCAGCGAAGGCTTCGACTTCGAGA TCTCCGGCCGTGTGACCGCCGGTTGGAACACCACCTTTGGTGCCTCGCATTACACCGCGCGCGATGACAGCGGCACGTCG ATCAATACGCAGCTGCCGCGTACCACCCTCAAGCTGTTCAACAGCTACACCCCGCAAGGTGCGTGGAGCGATCTGACCGT GGGTGGCGGCGTCAACTGGCAGAACCGTTCGTACTACGTGGACCCGGTGTACGGCGCGTTCCAGCAGAGTGCCTATGCCC TGGTCAGCGCGTTTGCGCGGTATCGTCTGTCACCGCAGTTCTCGGTGCAGCTCAATATCGACAACCTGCTCGACAAGCGT TACTACGCGCAGTTCAATGGCGGCTACGGCGCATGGGGCGCATCGCGCAACGGCATGCTGACCTTCAACTACACGTTCTG A
Upstream 100 bases:
>100_bases TCAGCCGCGAGTTCACCGGCACCGTGTCGGTGGGTGGCGGCGATTTCAACAAGACCCGCAGCGTGGCCGATGTCACCGTG CCGCTCAGCCCGGCGGCAAT
Downstream 100 bases:
>100_bases TCGACGCACACCTGGGGCGTTTTAACGTCTGATGGCTTGGCAATCACACAGGCATCTCGCAGAGATGCCTGTGTTTTTTT GTGCGCTGATGATCTGTAAC
Product: outer membrane receptor for ferric iron uptake
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MRARVIGVYQDGESDMDRYNLRKKIGSAIIDADLTDSTLLSVGYEYQKKESDDVTWGGFPLFFSDGTRTNYDRSFNPAAD WTFWDTRLQRTFASLQQGFDNGWTLKANVSHEKTEAANHLFYPFYTIFGFDRATGGGVVPYSGNYLTERKADGADVYAEG PFQLFGREHHLVAGASYNRREFTNNGTFDFPAPLDTYFGWNGAYPEPNWSPRTVQSTGTIKQKAAYVAGRFSLADPLTLL VGARYTDWQIDGGNFDAAQGLVPFSDTQTEVTPYAGLVYDINDVWSTYVSYTEIFNPQTLRDANGGYLDPLTGKGYEAGV KAAWFDDKLNASLAVFRIEQDNLGVATGGFVPGSSESAYEAANGVVSEGFDFEISGRVTAGWNTTFGASHYTARDDSGTS INTQLPRTTLKLFNSYTPQGAWSDLTVGGGVNWQNRSYYVDPVYGAFQQSAYALVSAFARYRLSPQFSVQLNIDNLLDKR YYAQFNGGYGAWGASRNGMLTFNYTF
Sequences:
>Translated_506_residues MRARVIGVYQDGESDMDRYNLRKKIGSAIIDADLTDSTLLSVGYEYQKKESDDVTWGGFPLFFSDGTRTNYDRSFNPAAD WTFWDTRLQRTFASLQQGFDNGWTLKANVSHEKTEAANHLFYPFYTIFGFDRATGGGVVPYSGNYLTERKADGADVYAEG PFQLFGREHHLVAGASYNRREFTNNGTFDFPAPLDTYFGWNGAYPEPNWSPRTVQSTGTIKQKAAYVAGRFSLADPLTLL VGARYTDWQIDGGNFDAAQGLVPFSDTQTEVTPYAGLVYDINDVWSTYVSYTEIFNPQTLRDANGGYLDPLTGKGYEAGV KAAWFDDKLNASLAVFRIEQDNLGVATGGFVPGSSESAYEAANGVVSEGFDFEISGRVTAGWNTTFGASHYTARDDSGTS INTQLPRTTLKLFNSYTPQGAWSDLTVGGGVNWQNRSYYVDPVYGAFQQSAYALVSAFARYRLSPQFSVQLNIDNLLDKR YYAQFNGGYGAWGASRNGMLTFNYTF >Mature_506_residues MRARVIGVYQDGESDMDRYNLRKKIGSAIIDADLTDSTLLSVGYEYQKKESDDVTWGGFPLFFSDGTRTNYDRSFNPAAD WTFWDTRLQRTFASLQQGFDNGWTLKANVSHEKTEAANHLFYPFYTIFGFDRATGGGVVPYSGNYLTERKADGADVYAEG PFQLFGREHHLVAGASYNRREFTNNGTFDFPAPLDTYFGWNGAYPEPNWSPRTVQSTGTIKQKAAYVAGRFSLADPLTLL VGARYTDWQIDGGNFDAAQGLVPFSDTQTEVTPYAGLVYDINDVWSTYVSYTEIFNPQTLRDANGGYLDPLTGKGYEAGV KAAWFDDKLNASLAVFRIEQDNLGVATGGFVPGSSESAYEAANGVVSEGFDFEISGRVTAGWNTTFGASHYTARDDSGTS INTQLPRTTLKLFNSYTPQGAWSDLTVGGGVNWQNRSYYVDPVYGAFQQSAYALVSAFARYRLSPQFSVQLNIDNLLDKR YYAQFNGGYGAWGASRNGMLTFNYTF
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=528, Percent_Identity=42.6136363636364, Blast_Score=414, Evalue=1e-117, Organism=Escherichia coli, GI1786344, Length=360, Percent_Identity=26.1111111111111, Blast_Score=76, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 56163; Mature: 56163
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARVIGVYQDGESDMDRYNLRKKIGSAIIDADLTDSTLLSVGYEYQKKESDDVTWGGFP CCCEEEEEEECCCCHHHHHHHHHHHCHHEEECCCCCCHHHHCCCHHHCCCCCCCEECCEE LFFSDGTRTNYDRSFNPAADWTFWDTRLQRTFASLQQGFDNGWTLKANVSHEKTEAANHL EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCEE FYPFYTIFGFDRATGGGVVPYSGNYLTERKADGADVYAEGPFQLFGREHHLVAGASYNRR EEEEHEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEECCCHHHCCCCEEEEECCCCCCC EFTNNGTFDFPAPLDTYFGWNGAYPEPNWSPRTVQSTGTIKQKAAYVAGRFSLADPLTLL CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHEEECCCCCCCHHHH VGARYTDWQIDGGNFDAAQGLVPFSDTQTEVTPYAGLVYDINDVWSTYVSYTEIFNPQTL HCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCE RDANGGYLDPLTGKGYEAGVKAAWFDDKLNASLAVFRIEQDNLGVATGGFVPGSSESAYE ECCCCCEECCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCCCCHHH AANGVVSEGFDFEISGRVTAGWNTTFGASHYTARDDSGTSINTQLPRTTLKLFNSYTPQG HHCCHHHCCCCEEECCEEEECCCCCCCCCCEECCCCCCCEEECCCCHHHHHHHHCCCCCC AWSDLTVGGGVNWQNRSYYVDPVYGAFQQSAYALVSAFARYRLSPQFSVQLNIDNLLDKR CCCCEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCC YYAQFNGGYGAWGASRNGMLTFNYTF EEEEECCCEEECCCCCCCEEEEEECC >Mature Secondary Structure MRARVIGVYQDGESDMDRYNLRKKIGSAIIDADLTDSTLLSVGYEYQKKESDDVTWGGFP CCCEEEEEEECCCCHHHHHHHHHHHCHHEEECCCCCCHHHHCCCHHHCCCCCCCEECCEE LFFSDGTRTNYDRSFNPAADWTFWDTRLQRTFASLQQGFDNGWTLKANVSHEKTEAANHL EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCEE FYPFYTIFGFDRATGGGVVPYSGNYLTERKADGADVYAEGPFQLFGREHHLVAGASYNRR EEEEHEEEECCCCCCCCCCCCCCCEEECCCCCCCCEEECCCHHHCCCCEEEEECCCCCCC EFTNNGTFDFPAPLDTYFGWNGAYPEPNWSPRTVQSTGTIKQKAAYVAGRFSLADPLTLL CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHEEECCCCCCCHHHH VGARYTDWQIDGGNFDAAQGLVPFSDTQTEVTPYAGLVYDINDVWSTYVSYTEIFNPQTL HCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCE RDANGGYLDPLTGKGYEAGVKAAWFDDKLNASLAVFRIEQDNLGVATGGFVPGSSESAYE ECCCCCEECCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCCCCHHH AANGVVSEGFDFEISGRVTAGWNTTFGASHYTARDDSGTSINTQLPRTTLKLFNSYTPQG HHCCHHHCCCCEEECCEEEECCCCCCCCCCEECCCCCCCEEECCCCHHHHHHHHCCCCCC AWSDLTVGGGVNWQNRSYYVDPVYGAFQQSAYALVSAFARYRLSPQFSVQLNIDNLLDKR CCCCEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHCCC YYAQFNGGYGAWGASRNGMLTFNYTF EEEEECCCEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]