| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is blh [H]
Identifier: 66767239
GI number: 66767239
Start: 1089719
End: 1090531
Strand: Reverse
Name: blh [H]
Synonym: XC_0907
Alternate gene names: 66767239
Gene position: 1090531-1089719 (Counterclockwise)
Preceding gene: 66767240
Following gene: 66767238
Centisome position: 21.18
GC content: 66.42
Gene sequence:
>813_bases ATGCAGCCGCAGGTCCTTGCGTTCTTCCATGCCGACAGCAACACCTTTACCTACGTGGTTGCCGATACGCGCACCGGGGC GGCGGCGGTGATCGACCCGGCGCTGGACTACGCTGCCGACACCGGCGCGATCACCACACAGGCGGCGCAAGCCATTGTCG ATGCCGTACAGCAGCATGGCTGGCAGGTGCAGTGGTTGTTGGAAACGCACGCACACGCCGATCACCTCAGCGCCGCGCAA TGGTTGAAGCAGCACTGGCCGGACGCGCGAGTCGGGATCGGCGAAGGCATCACACAGGTCCAGCAGACGCTGGCGCCGCA GTACGCATTGCCGGCCGGGTTTCGTGCCGATGGCGCGCAGTTCGACCATCTGTTTGCCGATGACGAGCGCTTCGCGTTGG GCGCGATTGCCTGCCGCGTGATTGCAGTGCCCGGGCACACCAGCGACAGCATCGCCTACCTGATGGGCGATGCACTGTTT CCTGGCGACTCGCTGTTCATGCCGGACGCGGGCACCGCGCGCTGCGACTTCCCCGGCGGTGACGCGCGTCAACTCTATGC GTCGATCCAACGCTTGTACGCCTTGCCGGATGCCACGCGCGTGTTCGTGTGCCATGACTACGGCCCGGGCGGGCGCGCGA TTGCACACGCGACCACCATCGGCGAGCAGCGCCGCAGCAATATCCATGTGCGCGATGGTGTGGACGTGGAGGCTTATGTG GCGCAACGGCAAGCCCGCGATGCCGGCCTGCCCGAACCCAAGTTGATGGGCCCGGCGTTGCAGGCCAATCTGCAGGCGGG CTGGCGCGGCTGA
Upstream 100 bases:
>100_bases ACCTATCGCCCGATTGCCGAGACCCAGCTGCGTGTCGCGGGCGACCGGCTGGCCGCGCTGCTCAATGCGGCGCTGCGCAG TCCCTGAGACGGAGATACCG
Downstream 100 bases:
>100_bases GTGCAGTACGTGCGGCCTGCGCGCGATGCTTCTTTCGGGCCGATGGTTTTCTTCCGTTCCTAAGAACCTGTTCACGATCT TTCCTGATCAGTGCAGACTA
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MQPQVLAFFHADSNTFTYVVADTRTGAAAVIDPALDYAADTGAITTQAAQAIVDAVQQHGWQVQWLLETHAHADHLSAAQ WLKQHWPDARVGIGEGITQVQQTLAPQYALPAGFRADGAQFDHLFADDERFALGAIACRVIAVPGHTSDSIAYLMGDALF PGDSLFMPDAGTARCDFPGGDARQLYASIQRLYALPDATRVFVCHDYGPGGRAIAHATTIGEQRRSNIHVRDGVDVEAYV AQRQARDAGLPEPKLMGPALQANLQAGWRG
Sequences:
>Translated_270_residues MQPQVLAFFHADSNTFTYVVADTRTGAAAVIDPALDYAADTGAITTQAAQAIVDAVQQHGWQVQWLLETHAHADHLSAAQ WLKQHWPDARVGIGEGITQVQQTLAPQYALPAGFRADGAQFDHLFADDERFALGAIACRVIAVPGHTSDSIAYLMGDALF PGDSLFMPDAGTARCDFPGGDARQLYASIQRLYALPDATRVFVCHDYGPGGRAIAHATTIGEQRRSNIHVRDGVDVEAYV AQRQARDAGLPEPKLMGPALQANLQAGWRG >Mature_270_residues MQPQVLAFFHADSNTFTYVVADTRTGAAAVIDPALDYAADTGAITTQAAQAIVDAVQQHGWQVQWLLETHAHADHLSAAQ WLKQHWPDARVGIGEGITQVQQTLAPQYALPAGFRADGAQFDHLFADDERFALGAIACRVIAVPGHTSDSIAYLMGDALF PGDSLFMPDAGTARCDFPGGDARQLYASIQRLYALPDATRVFVCHDYGPGGRAIAHATTIGEQRRSNIHVRDGVDVEAYV AQRQARDAGLPEPKLMGPALQANLQAGWRG
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=263, Percent_Identity=26.2357414448669, Blast_Score=89, Evalue=3e-18, Organism=Escherichia coli, GI1787158, Length=215, Percent_Identity=27.4418604651163, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17538952, Length=267, Percent_Identity=25.0936329588015, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI221330176, Length=263, Percent_Identity=28.5171102661597, Blast_Score=110, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 29057; Mature: 29057
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPQVLAFFHADSNTFTYVVADTRTGAAAVIDPALDYAADTGAITTQAAQAIVDAVQQHG CCCCEEEEEECCCCEEEEEEEECCCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCC WQVQWLLETHAHADHLSAAQWLKQHWPDARVGIGEGITQVQQTLAPQYALPAGFRADGAQ CEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC FDHLFADDERFALGAIACRVIAVPGHTSDSIAYLMGDALFPGDSLFMPDAGTARCDFPGG CCCEECCCCCHHHEEEEEEEEEECCCCCCCHHHHHCCCCCCCCCEECCCCCCCCCCCCCC DARQLYASIQRLYALPDATRVFVCHDYGPGGRAIAHATTIGEQRRSNIHVRDGVDVEAYV HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHCCEEEECCCCHHHHH AQRQARDAGLPEPKLMGPALQANLQAGWRG HHHHHHHCCCCCCHHCCHHHHHCCCCCCCC >Mature Secondary Structure MQPQVLAFFHADSNTFTYVVADTRTGAAAVIDPALDYAADTGAITTQAAQAIVDAVQQHG CCCCEEEEEECCCCEEEEEEEECCCCCEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCC WQVQWLLETHAHADHLSAAQWLKQHWPDARVGIGEGITQVQQTLAPQYALPAGFRADGAQ CEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC FDHLFADDERFALGAIACRVIAVPGHTSDSIAYLMGDALFPGDSLFMPDAGTARCDFPGG CCCEECCCCCHHHEEEEEEEEEECCCCCCCHHHHHCCCCCCCCCEECCCCCCCCCCCCCC DARQLYASIQRLYALPDATRVFVCHDYGPGGRAIAHATTIGEQRRSNIHVRDGVDVEAYV HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHCCEEEECCCCHHHHH AQRQARDAGLPEPKLMGPALQANLQAGWRG HHHHHHHCCCCCCHHCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]