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The map label for this gene is 66767238

Identifier: 66767238

GI number: 66767238

Start: 1088815

End: 1089333

Strand: Reverse

Name: 66767238

Synonym: XC_0906

Alternate gene names: NA

Gene position: 1089333-1088815 (Counterclockwise)

Preceding gene: 66767239

Following gene: 66767235

Centisome position: 21.16

GC content: 56.45

Gene sequence:

>519_bases
GTGGCCCGCGCCAGACAGGAGCGCAACGCCTGCACCAGGTTCTTGATCGTGGACGCGCAGAGCGTAAAGAACACCGACAC
AGCAGGGCAAAAGGGATATGACGCGGGCAAGAAGGTGTCGGGCATCAAGCGGCATATCGCTGTTGATACTCAGGGATTGC
CCCATGCAATCGCGGTGACGACGGCGGAGGTGACCGACCGCAAAGGTGCGCTGCAAGCGTTGGAGCGCTGCCAGTCAAAC
TTGACGCATGTACAAAGCTTACTGTGCGACAGCGGTTACACCGGAGTACGGTTTGCCGACGGCGTGCGAGAGATTTTAGG
CGAACAGCTCACGGTGCAGATTGCCAAGCGCAGCGAACTGCATACCTTCAAGGTCATGCCCAAGCGATGGATCGTCGAGC
GTAGTTTTGCTTGGCTGGAGAAGAACCGAAGGCTATGGAAGAACTGCGAGCGCAAACTAAACACCAGCCTGCAGTTCATC
CATTTGGCCTTCTTGGCACTATTACTCAGAAGATCGTGA

Upstream 100 bases:

>100_bases
CCAAAGTGGCGGACCGTGCACTCGTACTTTGCCAAGTGGAGCGAGTGCGACGATGAGGGAGTGAGCCTGCTGGAGCAGGC
ACTTAAAAAATCAGGTTGGC

Downstream 100 bases:

>100_bases
ACAGGTTCTTACAGAAGCGACCTTTTGTGATGAGGCCAAGTTCTACAGCAGCCTCACCTTCCGATTCACGCTCTCCGTAT
TTTCTTCTTTGTTTATCGGT

Product: IS1480 transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; IS5 Family Transposase; Transposase IS5 Family Protein; Transposase Of; LOW QUALITY PROTEIN Transposase; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Isxo3 Transposase Protein; Transposase Fragment; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Transposase Protein

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MARARQERNACTRFLIVDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALERCQSN
LTHVQSLLCDSGYTGVRFADGVREILGEQLTVQIAKRSELHTFKVMPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFI
HLAFLALLLRRS

Sequences:

>Translated_172_residues
MARARQERNACTRFLIVDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALERCQSN
LTHVQSLLCDSGYTGVRFADGVREILGEQLTVQIAKRSELHTFKVMPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFI
HLAFLALLLRRS
>Mature_171_residues
ARARQERNACTRFLIVDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVTTAEVTDRKGALQALERCQSNL
THVQSLLCDSGYTGVRFADGVREILGEQLTVQIAKRSELHTFKVMPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFIH
LAFLALLLRRS

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19489; Mature: 19358

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARARQERNACTRFLIVDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVT
CCCCHHHHHHHHEEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEE
TAEVTDRKGALQALERCQSNLTHVQSLLCDSGYTGVRFADGVREILGEQLTVQIAKRSEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCC
HTFKVMPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFIHLAFLALLLRRS
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARARQERNACTRFLIVDAQSVKNTDTAGQKGYDAGKKVSGIKRHIAVDTQGLPHAIAVT
CCCHHHHHHHHEEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEE
TAEVTDRKGALQALERCQSNLTHVQSLLCDSGYTGVRFADGVREILGEQLTVQIAKRSEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCC
HTFKVMPKRWIVERSFAWLEKNRRLWKNCERKLNTSLQFIHLAFLALLLRRS
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA