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The map label for this gene is 66766590

Identifier: 66766590

GI number: 66766590

Start: 295184

End: 295921

Strand: Reverse

Name: 66766590

Synonym: XC_0245

Alternate gene names: NA

Gene position: 295921-295184 (Counterclockwise)

Preceding gene: 66766591

Following gene: 66766589

Centisome position: 5.75

GC content: 72.36

Gene sequence:

>738_bases
ATGCCCGCTACGATGACCGACCTTGTGAGCCGTTATGCCGAACGCGCCGCACCTGCCGCGTTGCGCGGACAACTGCTGTG
CAGCTGGCGATTTCGCCAGGGTGCGGCGGCGGACGCGCCGGTGCGGGTGCTGCCTGACGCGCATGTCGACCTGATCTGGG
ATGGTGCGCAGCTGTTCGTGGCCGGGCCGGATCGCGCGGCCAACCTGGCCTGCGTGCCGGCCGGGCGCGTGCTCAGCGGT
GTGCGCCTGGCGCCCGGGGCGGCCACGGCGGTGCTGGGCACCGCATTGCACACGCTCACCGACCAGCGCGTGGCATTGGA
CGCGTTGTGGGGCACCGCCGGGCTGGCCTGGCAGCACCGGCTCGAAGACGGCGCCGACCCCGTGCTGACGCTGCAGGCAC
TGTGTCAGCAGCACGCTGGCCGCAGCGACCCGACCATGGCCTGGCTGTTCGCACAGCTGGCGGCCGGCATGCCGATGCAG
CTGGCCGCGCTCACCGCCACGCTGGGCATCAGCGAGCGTGCGCTGCGGCGGCGCTGCCAGACCGCCTTCGGTTATGGCGC
CAAGACCCTGGAGCGGATTCTGCGGCTGCAGCGCTTTTTGGCCATTGCACACCGGCACCGCACCCTGACCGACGCCGCGC
TGGCCGCAGGTTACGGCGATGCGCCGCACCTGGTACGCGATGCCCGCCAGTTGGCCGGGCTGGCGCCGCGCGAGCTGGTG
CAGCAACACGCGCGGTGA

Upstream 100 bases:

>100_bases
GAACTGATCCAGCCGGACCTGTTCACCCCGCGCGGCTACGACGAGAGTGGTCACTCCGAGCGCTGAGCGCGCGCTACGCT
GAGCTCTACGTCCACGCGCC

Downstream 100 bases:

>100_bases
GTTGGCCGTTTTCGCCAAGCCACAGGTGCGCGCGGCCGGCATGCTGGGGCCCTCGCCTTCGCAAGGACCCGCCGTGGACA
CCCAGCACCGTATCGACTAT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPATMTDLVSRYAERAAPAALRGQLLCSWRFRQGAAADAPVRVLPDAHVDLIWDGAQLFVAGPDRAANLACVPAGRVLSG
VRLAPGAATAVLGTALHTLTDQRVALDALWGTAGLAWQHRLEDGADPVLTLQALCQQHAGRSDPTMAWLFAQLAAGMPMQ
LAALTATLGISERALRRRCQTAFGYGAKTLERILRLQRFLAIAHRHRTLTDAALAAGYGDAPHLVRDARQLAGLAPRELV
QQHAR

Sequences:

>Translated_245_residues
MPATMTDLVSRYAERAAPAALRGQLLCSWRFRQGAAADAPVRVLPDAHVDLIWDGAQLFVAGPDRAANLACVPAGRVLSG
VRLAPGAATAVLGTALHTLTDQRVALDALWGTAGLAWQHRLEDGADPVLTLQALCQQHAGRSDPTMAWLFAQLAAGMPMQ
LAALTATLGISERALRRRCQTAFGYGAKTLERILRLQRFLAIAHRHRTLTDAALAAGYGDAPHLVRDARQLAGLAPRELV
QQHAR
>Mature_244_residues
PATMTDLVSRYAERAAPAALRGQLLCSWRFRQGAAADAPVRVLPDAHVDLIWDGAQLFVAGPDRAANLACVPAGRVLSGV
RLAPGAATAVLGTALHTLTDQRVALDALWGTAGLAWQHRLEDGADPVLTLQALCQQHAGRSDPTMAWLFAQLAAGMPMQL
AALTATLGISERALRRRCQTAFGYGAKTLERILRLQRFLAIAHRHRTLTDAALAAGYGDAPHLVRDARQLAGLAPRELVQ
QHAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26237; Mature: 26105

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATMTDLVSRYAERAAPAALRGQLLCSWRFRQGAAADAPVRVLPDAHVDLIWDGAQLFV
CCCHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCEEECCCCCEEEEECCCEEEE
AGPDRAANLACVPAGRVLSGVRLAPGAATAVLGTALHTLTDQRVALDALWGTAGLAWQHR
ECCCCCCCEEECCCHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDGADPVLTLQALCQQHAGRSDPTMAWLFAQLAAGMPMQLAALTATLGISERALRRRCQ
HCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH
TAFGYGAKTLERILRLQRFLAIAHRHRTLTDAALAAGYGDAPHLVRDARQLAGLAPRELV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
QQHAR
HHHCC
>Mature Secondary Structure 
PATMTDLVSRYAERAAPAALRGQLLCSWRFRQGAAADAPVRVLPDAHVDLIWDGAQLFV
CCHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCCCCCCEEECCCCCEEEEECCCEEEE
AGPDRAANLACVPAGRVLSGVRLAPGAATAVLGTALHTLTDQRVALDALWGTAGLAWQHR
ECCCCCCCEEECCCHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEDGADPVLTLQALCQQHAGRSDPTMAWLFAQLAAGMPMQLAALTATLGISERALRRRCQ
HCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH
TAFGYGAKTLERILRLQRFLAIAHRHRTLTDAALAAGYGDAPHLVRDARQLAGLAPRELV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
QQHAR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517396 [H]