Click here to switch to the map view.

The map label for this gene is 66048335

Identifier: 66048335

GI number: 66048335

Start: 6063045

End: 6063770

Strand: Direct

Name: 66048335

Synonym: Psyr_5111

Alternate gene names: NA

Gene position: 6063045-6063770 (Clockwise)

Preceding gene: 66048334

Following gene: 66048336

Centisome position: 99.5

GC content: 57.3

Gene sequence:

>726_bases
ATGTCGCGTAAAGTTTTTGTAGCCGGCGCATCCGGTGTAATCGGCAGAGCCCTGCTCAAGCTCTTGGTAGCTGCGGATTA
CAGCGTATATGGCGCTACCCGTCGCGCCGAAAAAGTGAAAGACATTGAGGCCACAGGTGCTACGGCAGTAGTGGTCGATG
TCTATGACGCCGAGCGTTTAAACGAAGAGTTGGTCCGCATACAGCCATGGGCTGTTATTCATCAACTGACAGATCTGCCT
CGTGGCCTGAGCCCCGAATTGATGGCAAAAGCGGTCGAGAACAACGCTCGTATCCGTACAGAAGGAACGCGCAATCTGGT
AGCCGCCGCTCGAGCCGCTGGCGCTACCCGTCTGATAGCTCAAAGCATCGCCTGGGCCTACCGTCCAGGCGACACCCCTT
ATCTGGAAACCAGCCCTCTGGACGTAGAGGCACAAGGCAGCCGTGGCATCAGCGTGGAGGGTGTGGCGGCCCTGGAACAG
CAAGTGCTCAGCGAGCCTGCATTGAACGGCACCGTCTTGCGCTATGGTCAGTTGTATGGGCCCGACACCGGCACTGACGA
GCCGACCGGTACCAGCCCAGTACACGTACAAGACGCTGCGCGTGCAGTACTGCTGGCGTTGCAAAAAGAGCAAAGTGGTA
TTTTTAATATCACTCAGGACAGCCCGACCGTCAGCAACGAAAAAGCCAAGCGCATACTGGGGTGGTCTCCTACCGTGGAG
GCTTGA

Upstream 100 bases:

>100_bases
CCCGATAGAACCCACAGCTTTTGTTAGAGTGTATTGACACAGTGCCAGGCGAGTTGGCGCACGGCTTCCGCTGCAATGAA
CCCTCAAGGAGATGAGTGCA

Downstream 100 bases:

>100_bases
CGCCCCAACGCAGCTACTCCATACGAAGGCAGGCTTTCTATCTCCAGTCGCTTGCCTGCTACCGTCAATAGATGGCAACT
TTCAGACAGGAAAGTGTTAT

Product: dTDP-glucose 4,6-dehydratase

Products: NA

Alternate protein names: DTDP-Glucose 4 6-Dehydratase; Dehydrogenase; Epimerase/Dehydratase; Nucleoside-Diphosphate-Sugar Epimerase; Carbon-Nitrogen Family Hydrolase; Steroid Protein ; NAD Dependent Epimerase/Dehydratase Family; Glucose Epimerase Protein

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSRKVFVAGASGVIGRALLKLLVAADYSVYGATRRAEKVKDIEATGATAVVVDVYDAERLNEELVRIQPWAVIHQLTDLP
RGLSPELMAKAVENNARIRTEGTRNLVAAARAAGATRLIAQSIAWAYRPGDTPYLETSPLDVEAQGSRGISVEGVAALEQ
QVLSEPALNGTVLRYGQLYGPDTGTDEPTGTSPVHVQDAARAVLLALQKEQSGIFNITQDSPTVSNEKAKRILGWSPTVE
A

Sequences:

>Translated_241_residues
MSRKVFVAGASGVIGRALLKLLVAADYSVYGATRRAEKVKDIEATGATAVVVDVYDAERLNEELVRIQPWAVIHQLTDLP
RGLSPELMAKAVENNARIRTEGTRNLVAAARAAGATRLIAQSIAWAYRPGDTPYLETSPLDVEAQGSRGISVEGVAALEQ
QVLSEPALNGTVLRYGQLYGPDTGTDEPTGTSPVHVQDAARAVLLALQKEQSGIFNITQDSPTVSNEKAKRILGWSPTVE
A
>Mature_240_residues
SRKVFVAGASGVIGRALLKLLVAADYSVYGATRRAEKVKDIEATGATAVVVDVYDAERLNEELVRIQPWAVIHQLTDLPR
GLSPELMAKAVENNARIRTEGTRNLVAAARAAGATRLIAQSIAWAYRPGDTPYLETSPLDVEAQGSRGISVEGVAALEQQ
VLSEPALNGTVLRYGQLYGPDTGTDEPTGTSPVHVQDAARAVLLALQKEQSGIFNITQDSPTVSNEKAKRILGWSPTVEA

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25730; Mature: 25599

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKVFVAGASGVIGRALLKLLVAADYSVYGATRRAEKVKDIEATGATAVVVDVYDAERL
CCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH
NEELVRIQPWAVIHQLTDLPRGLSPELMAKAVENNARIRTEGTRNLVAAARAAGATRLIA
HHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHCCHHHHHH
QSIAWAYRPGDTPYLETSPLDVEAQGSRGISVEGVAALEQQVLSEPALNGTVLRYGQLYG
HHHHHEECCCCCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECEEEC
PDTGTDEPTGTSPVHVQDAARAVLLALQKEQSGIFNITQDSPTVSNEKAKRILGWSPTVE
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCCCCC
A
C
>Mature Secondary Structure 
SRKVFVAGASGVIGRALLKLLVAADYSVYGATRRAEKVKDIEATGATAVVVDVYDAERL
CCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH
NEELVRIQPWAVIHQLTDLPRGLSPELMAKAVENNARIRTEGTRNLVAAARAAGATRLIA
HHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHCCHHHHHH
QSIAWAYRPGDTPYLETSPLDVEAQGSRGISVEGVAALEQQVLSEPALNGTVLRYGQLYG
HHHHHEECCCCCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECEEEC
PDTGTDEPTGTSPVHVQDAARAVLLALQKEQSGIFNITQDSPTVSNEKAKRILGWSPTVE
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA