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The map label for this gene is yjiK [H]

Identifier: 66048334

GI number: 66048334

Start: 6061710

End: 6062690

Strand: Direct

Name: yjiK [H]

Synonym: Psyr_5110

Alternate gene names: 66048334

Gene position: 6061710-6062690 (Clockwise)

Preceding gene: 66048333

Following gene: 66048335

Centisome position: 99.48

GC content: 56.47

Gene sequence:

>981_bases
ATGCAACTGGAAACGATCAAGGCAAAGCGCTTGACGTGGTCGAACGTCGCTCGAAGGCAGGTATCACTCGCACAACTTGT
GCTGAGTGCAGGTGCCCTCGGGCTGTTGATCCTGGCCTACGCCGTGTCGACACACTTTCAGGTCCACCAACAGCTGTACC
AGTACGGTCGCACCTGGTTAAAGGGCAATACGGCAGCCGACAAGAATATCTGGCTGCCGGATTTCCAGGTGGTTATCGAC
GCCAAACCACTTGCCCCGGACGTCGCCAATATCTCCGGGATCACCTACGACTACGACAATGACCGACTGCTGGCAGTGAC
CAACAAAGGCCCCATGCAACTGCTGGCGCTGAACACGAACGGCGACATAATCGACCGCTACCCACTGATCGGTTTCGACG
ACACAGAGGGTGTGGCTTATCTGGGCAACGGTCGCATCGTGCTGTGCGATGAAGATCTCCAGCAACTGGACATCATCACG
TTGCCGACGCAGGCACGCCCCATCCACGTCGAGGAAGCTCAGTTCATTGCGCTACTGATCAACCCCAGTATTCATAACAA
GGGATTCGAAGGCGTAACCTACGATCCCGCCAACGACCGCCTGTTCGCGATCAAAGAGCGCGATCCACGCCAGATGTTCG
AGGTTTCCGGCGTCCTGCGCTCCATCGATCAAGGCCGTTTGCAGATCAAAATTGCCGACCGGCTGGACTGGATCATGAAA
AGTGTCGCTGCACGCGACCTTTCAGACGGCTACTACGACCCGCGAACCAGCCATTTACTGCTGCTCAGCGACCAGTCGCG
CTCGATCACAGAACTGGACAGCAAAGGACGATTCGTCAGCATTCGATCACTGCTGGGTACCTTCTCCGACCTCAAGCACA
GCGCCCCCCAACCCGAAGGCCTGACCATGGATCGCGCAGGCAACCTGTACGTCGTGAACGAGCCGAATCTGTTTTACAAG
TTTTCGAAAGTGCCGGAATAG

Upstream 100 bases:

>100_bases
GTAAACCGCAACGCCCTATGCAGGCCTATCGCTTCGCCTGGCAGCAGAATGTTGATTAATCCCCCGCCCAGCCGCCCAAC
ACGCGGGAGTGCCTGACGCC

Downstream 100 bases:

>100_bases
TAGTGAAGAAACCTGGCCTTGAGGGTGACTTTCGGGGTGTGGGGGCAGGGTCTGTTTTGGGAGAGCTAATGGAATTCGGA
AAAATGTGCCAGTTGCTCAG

Product: SdiA-regulated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MQLETIKAKRLTWSNVARRQVSLAQLVLSAGALGLLILAYAVSTHFQVHQQLYQYGRTWLKGNTAADKNIWLPDFQVVID
AKPLAPDVANISGITYDYDNDRLLAVTNKGPMQLLALNTNGDIIDRYPLIGFDDTEGVAYLGNGRIVLCDEDLQQLDIIT
LPTQARPIHVEEAQFIALLINPSIHNKGFEGVTYDPANDRLFAIKERDPRQMFEVSGVLRSIDQGRLQIKIADRLDWIMK
SVAARDLSDGYYDPRTSHLLLLSDQSRSITELDSKGRFVSIRSLLGTFSDLKHSAPQPEGLTMDRAGNLYVVNEPNLFYK
FSKVPE

Sequences:

>Translated_326_residues
MQLETIKAKRLTWSNVARRQVSLAQLVLSAGALGLLILAYAVSTHFQVHQQLYQYGRTWLKGNTAADKNIWLPDFQVVID
AKPLAPDVANISGITYDYDNDRLLAVTNKGPMQLLALNTNGDIIDRYPLIGFDDTEGVAYLGNGRIVLCDEDLQQLDIIT
LPTQARPIHVEEAQFIALLINPSIHNKGFEGVTYDPANDRLFAIKERDPRQMFEVSGVLRSIDQGRLQIKIADRLDWIMK
SVAARDLSDGYYDPRTSHLLLLSDQSRSITELDSKGRFVSIRSLLGTFSDLKHSAPQPEGLTMDRAGNLYVVNEPNLFYK
FSKVPE
>Mature_326_residues
MQLETIKAKRLTWSNVARRQVSLAQLVLSAGALGLLILAYAVSTHFQVHQQLYQYGRTWLKGNTAADKNIWLPDFQVVID
AKPLAPDVANISGITYDYDNDRLLAVTNKGPMQLLALNTNGDIIDRYPLIGFDDTEGVAYLGNGRIVLCDEDLQQLDIIT
LPTQARPIHVEEAQFIALLINPSIHNKGFEGVTYDPANDRLFAIKERDPRQMFEVSGVLRSIDQGRLQIKIADRLDWIMK
SVAARDLSDGYYDPRTSHLLLLSDQSRSITELDSKGRFVSIRSLLGTFSDLKHSAPQPEGLTMDRAGNLYVVNEPNLFYK
FSKVPE

Specific function: Unknown

COG id: COG3204

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yjiK family [H]

Homologues:

Organism=Escherichia coli, GI145693216, Length=262, Percent_Identity=30.1526717557252, Blast_Score=125, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR009722 [H]

Pfam domain/function: PF06977 SdiA-regulated [H]

EC number: NA

Molecular weight: Translated: 36587; Mature: 36587

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLETIKAKRLTWSNVARRQVSLAQLVLSAGALGLLILAYAVSTHFQVHQQLYQYGRTWL
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
KGNTAADKNIWLPDFQVVIDAKPLAPDVANISGITYDYDNDRLLAVTNKGPMQLLALNTN
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEECCC
GDIIDRYPLIGFDDTEGVAYLGNGRIVLCDEDLQQLDIITLPTQARPIHVEEAQFIALLI
CCEEECCCEECCCCCCCEEEECCCEEEEECCCCCCEEEEECCCCCCCEEECCCEEEEEEE
NPSIHNKGFEGVTYDPANDRLFAIKERDPRQMFEVSGVLRSIDQGRLQIKIADRLDWIMK
CCCCCCCCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
SVAARDLSDGYYDPRTSHLLLLSDQSRSITELDSKGRFVSIRSLLGTFSDLKHSAPQPEG
HHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCC
LTMDRAGNLYVVNEPNLFYKFSKVPE
EEEECCCCEEEEECCCEEEEECCCCC
>Mature Secondary Structure
MQLETIKAKRLTWSNVARRQVSLAQLVLSAGALGLLILAYAVSTHFQVHQQLYQYGRTWL
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
KGNTAADKNIWLPDFQVVIDAKPLAPDVANISGITYDYDNDRLLAVTNKGPMQLLALNTN
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEEECCC
GDIIDRYPLIGFDDTEGVAYLGNGRIVLCDEDLQQLDIITLPTQARPIHVEEAQFIALLI
CCEEECCCEECCCCCCCEEEECCCEEEEECCCCCCEEEEECCCCCCCEEECCCEEEEEEE
NPSIHNKGFEGVTYDPANDRLFAIKERDPRQMFEVSGVLRSIDQGRLQIKIADRLDWIMK
CCCCCCCCCCCCEECCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
SVAARDLSDGYYDPRTSHLLLLSDQSRSITELDSKGRFVSIRSLLGTFSDLKHSAPQPEG
HHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCCC
LTMDRAGNLYVVNEPNLFYKFSKVPE
EEEECCCCEEEEECCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]