| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ansA [H]
Identifier: 66048277
GI number: 66048277
Start: 5995267
End: 5996271
Strand: Direct
Name: ansA [H]
Synonym: Psyr_5053
Alternate gene names: 66048277
Gene position: 5995267-5996271 (Clockwise)
Preceding gene: 66048276
Following gene: 66048281
Centisome position: 98.38
GC content: 64.18
Gene sequence:
>1005_bases ATGCCTGATGACGCACAACAACCCGCCCAACGCGTGATGGTTCTTTACACCGGCGGCACCATCGGCATGCAGGCCAGCGC CAACGGCCTGGCACCGGCCTCAGGTTTCGAAGCGCGAATGGCCGGGCAACTGGCCGAGCACCCGGAACTGGTGGTGCCGC AGTGGCGCTTTCGCGAGATGTCGCCGCTGATCGACAGCGCCAACATGACGCCTTCCTACTGGCTGCGCCTGCGCGCGGCG GTAATCGAGGCGGTTGAGGTCGACGGCTGCGATGCGGTGCTGGTCCTGCATGGCACCGACACCCTGGCGTACAGCGCAGC GGCGATGTGCTTCCAGTTGTTGGGGTTCAGCGCGCCGGTGCTGTTCACCGGTTCGATGCTGCCTGCCGGCGTGCAGGACA GCGATGCCTGGGAAAACGTCAACGGCGCTCTGCTGGCGCTGGGTTCGGGTCTGGTGTCAGGCGTTCAGCTGTATTTCCAC GGGCAACTGATGACACCCGTACGCTGCGCGAAAATTCGCAGCTTCGGTCGTCAACCCTTCGCACCGCTGCAACGCTCGCG GGGTGGCCATGCGGTGATTTCGCTCCCTGACGCACTGAACTATCGCCAGCCCAAGACACTTACAGAGGTGGCGGTATTGC CGCTGTTTCCCGGTGTCGGTGCTGCCCAGCTGGACGGTCTGATCAACAGTGGTATCCGCGGTCTGGTGCTCGAATGCTTC GGCAGCGGCACCGGCCCCAGTGACGATCCGCAATTTCTGGCCAGTCTGGAGAACGCACGAGCGCTGGGTATCTGTGTGGT AGCGATTACCCAGTGCCATGAGGGCGGTGTCGAACTTGATGTCTACGAAGCGGGCAGCCGTCTGCGCAGTGCAGGCGTGC TCTCCGGTGGTGGCATGACCCGTGAAGCAGCGCTCGGCAAACTGCATGCGCTGCTGGGCGCCGGCCTGACGACCGAAGAG GTCCGCCGCCTGGTCGAACTGGACCTGTGCGGCGAGCTGCGTTAA
Upstream 100 bases:
>100_bases CAGCCAATCCGACCCGTCAGTCGACGCAGGATGCCGAAGCGGCAGCCAAGCCTGCGCCCGAAGCACGATAACCACCGCGA CACTACGCCGGAGAAGAGCC
Downstream 100 bases:
>100_bases GCGGCTGCCTCTGCTTTACCCGAGGCGTCACGCACTCGCGCGACGCCTCACCCCTTCATGAAGCCTTGCATTCTTCCTGC GCGCCCCTGAGCATCGAATC
Product: asparaginase
Products: NA
Alternate protein names: L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPDDAQQPAQRVMVLYTGGTIGMQASANGLAPASGFEARMAGQLAEHPELVVPQWRFREMSPLIDSANMTPSYWLRLRAA VIEAVEVDGCDAVLVLHGTDTLAYSAAAMCFQLLGFSAPVLFTGSMLPAGVQDSDAWENVNGALLALGSGLVSGVQLYFH GQLMTPVRCAKIRSFGRQPFAPLQRSRGGHAVISLPDALNYRQPKTLTEVAVLPLFPGVGAAQLDGLINSGIRGLVLECF GSGTGPSDDPQFLASLENARALGICVVAITQCHEGGVELDVYEAGSRLRSAGVLSGGGMTREAALGKLHALLGAGLTTEE VRRLVELDLCGELR
Sequences:
>Translated_334_residues MPDDAQQPAQRVMVLYTGGTIGMQASANGLAPASGFEARMAGQLAEHPELVVPQWRFREMSPLIDSANMTPSYWLRLRAA VIEAVEVDGCDAVLVLHGTDTLAYSAAAMCFQLLGFSAPVLFTGSMLPAGVQDSDAWENVNGALLALGSGLVSGVQLYFH GQLMTPVRCAKIRSFGRQPFAPLQRSRGGHAVISLPDALNYRQPKTLTEVAVLPLFPGVGAAQLDGLINSGIRGLVLECF GSGTGPSDDPQFLASLENARALGICVVAITQCHEGGVELDVYEAGSRLRSAGVLSGGGMTREAALGKLHALLGAGLTTEE VRRLVELDLCGELR >Mature_333_residues PDDAQQPAQRVMVLYTGGTIGMQASANGLAPASGFEARMAGQLAEHPELVVPQWRFREMSPLIDSANMTPSYWLRLRAAV IEAVEVDGCDAVLVLHGTDTLAYSAAAMCFQLLGFSAPVLFTGSMLPAGVQDSDAWENVNGALLALGSGLVSGVQLYFHG QLMTPVRCAKIRSFGRQPFAPLQRSRGGHAVISLPDALNYRQPKTLTEVAVLPLFPGVGAAQLDGLINSGIRGLVLECFG SGTGPSDDPQFLASLENARALGICVVAITQCHEGGVELDVYEAGSRLRSAGVLSGGGMTREAALGKLHALLGAGLTTEEV RRLVELDLCGELR
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Homo sapiens, GI122937331, Length=365, Percent_Identity=32.6027397260274, Blast_Score=141, Evalue=8e-34, Organism=Escherichia coli, GI1788065, Length=334, Percent_Identity=35.0299401197605, Blast_Score=184, Evalue=9e-48, Organism=Caenorhabditis elegans, GI193207374, Length=364, Percent_Identity=29.6703296703297, Blast_Score=153, Evalue=1e-37, Organism=Caenorhabditis elegans, GI193207372, Length=364, Percent_Identity=29.6703296703297, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17558278, Length=364, Percent_Identity=29.6703296703297, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17558280, Length=364, Percent_Identity=29.6703296703297, Blast_Score=152, Evalue=2e-37, Organism=Drosophila melanogaster, GI24639609, Length=368, Percent_Identity=30.9782608695652, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI24645530, Length=377, Percent_Identity=30.7692307692308, Blast_Score=146, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006033 - InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 35172; Mature: 35041
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00144 ASN_GLN_ASE_1 ; PS00917 ASN_GLN_ASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDDAQQPAQRVMVLYTGGTIGMQASANGLAPASGFEARMAGQLAEHPELVVPQWRFREM CCCCHHCHHHEEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEECCCHHHHHH SPLIDSANMTPSYWLRLRAAVIEAVEVDGCDAVLVLHGTDTLAYSAAAMCFQLLGFSAPV HHHHCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCC LFTGSMLPAGVQDSDAWENVNGALLALGSGLVSGVQLYFHGQLMTPVRCAKIRSFGRQPF EEECCCCCCCCCCCCHHHCCCCEEEEHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCC APLQRSRGGHAVISLPDALNYRQPKTLTEVAVLPLFPGVGAAQLDGLINSGIRGLVLECF CHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHH GSGTGPSDDPQFLASLENARALGICVVAITQCHEGGVELDVYEAGSRLRSAGVLSGGGMT CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHCHHHHHCCEECCCCCC REAALGKLHALLGAGLTTEEVRRLVELDLCGELR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure PDDAQQPAQRVMVLYTGGTIGMQASANGLAPASGFEARMAGQLAEHPELVVPQWRFREM CCCHHCHHHEEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEECCCHHHHHH SPLIDSANMTPSYWLRLRAAVIEAVEVDGCDAVLVLHGTDTLAYSAAAMCFQLLGFSAPV HHHHCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCC LFTGSMLPAGVQDSDAWENVNGALLALGSGLVSGVQLYFHGQLMTPVRCAKIRSFGRQPF EEECCCCCCCCCCCCHHHCCCCEEEEHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCC APLQRSRGGHAVISLPDALNYRQPKTLTEVAVLPLFPGVGAAQLDGLINSGIRGLVLECF CHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHH GSGTGPSDDPQFLASLENARALGICVVAITQCHEGGVELDVYEAGSRLRSAGVLSGGGMT CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEHHCHHHHHCCEECCCCCC REAALGKLHALLGAGLTTEEVRRLVELDLCGELR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]