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The map label for this gene is paiB [H]

Identifier: 66048281

GI number: 66048281

Start: 6000253

End: 6000891

Strand: Direct

Name: paiB [H]

Synonym: Psyr_5057

Alternate gene names: 66048281

Gene position: 6000253-6000891 (Clockwise)

Preceding gene: 66048277

Following gene: 66048282

Centisome position: 98.47

GC content: 60.09

Gene sequence:

>639_bases
ATGTACATCCCTGCCGCTTTCAACGATAACGACACGCCGAGCCTGCACCAGCAGATGGAGCAGACGCGCCTGGCGATCCT
GGTCACCGACGGCGCAGAAGGATTGCAGGCAACCCACCTGCCGCTGCTGTTGCGCCGCGATGAAGGTTCGTATGGCACGC
TTTACGGGCATCTGGCCAAAGCCAATCCGCAATGGCAGCAACTGAGCTCAGGTGCCGAAGCACTGGTGATTTTTCCTGGC
GGCGATGCCTACGTGAGCCCGTCGTTCTATCCGAGCAAGAGGGAGCATGGCAAGGTCGTACCCACGTGGAACTATGTGGC
CGTGCATGCTTATGGGCAGGCCGAGGTTTTCACCGACGCCGCGCAATTGCATCAATTGCTGGCTGACCTGACCCATCGCC
ATGAATCCGACCGAGCGCAACCCTGGTCCATTGACGATGCGCCAGCGGACTACATCGCGAAGATGCTCGGAGCGATTGTC
GGATTCGCCATTCCGGTGCAGCGGCTGCAGGGCAAACGTAAACTCAGTCAGAATCGCAGCGCTGCGGACATGGCCGGTGT
GCGCGACGGCCTTGCCGCAAGCCAGGATGCAAATGACCAACACATCGCTCGCCTGATGAGCGAAGGGAGCAGCTCATGA

Upstream 100 bases:

>100_bases
GATCAGGCATGCATTGGCCCTGTTAAAACGATCAAAAATGGATCTTACATCAGACCAATGCCTTGCCTACGATCCTGTCA
CTCGCCAAGGAACAGTCCCC

Downstream 100 bases:

>100_bases
CCGATATCCGGATTCGCCGCGTTACCGTCGACGATCATCACGCGTGGCTGCCTCTGTGGCAGGCCTACCTGCGCTTCTAC
AACACCGAGTTGGCCGAAGG

Product: negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MYIPAAFNDNDTPSLHQQMEQTRLAILVTDGAEGLQATHLPLLLRRDEGSYGTLYGHLAKANPQWQQLSSGAEALVIFPG
GDAYVSPSFYPSKREHGKVVPTWNYVAVHAYGQAEVFTDAAQLHQLLADLTHRHESDRAQPWSIDDAPADYIAKMLGAIV
GFAIPVQRLQGKRKLSQNRSAADMAGVRDGLAASQDANDQHIARLMSEGSSS

Sequences:

>Translated_212_residues
MYIPAAFNDNDTPSLHQQMEQTRLAILVTDGAEGLQATHLPLLLRRDEGSYGTLYGHLAKANPQWQQLSSGAEALVIFPG
GDAYVSPSFYPSKREHGKVVPTWNYVAVHAYGQAEVFTDAAQLHQLLADLTHRHESDRAQPWSIDDAPADYIAKMLGAIV
GFAIPVQRLQGKRKLSQNRSAADMAGVRDGLAASQDANDQHIARLMSEGSSS
>Mature_212_residues
MYIPAAFNDNDTPSLHQQMEQTRLAILVTDGAEGLQATHLPLLLRRDEGSYGTLYGHLAKANPQWQQLSSGAEALVIFPG
GDAYVSPSFYPSKREHGKVVPTWNYVAVHAYGQAEVFTDAAQLHQLLADLTHRHESDRAQPWSIDDAPADYIAKMLGAIV
GFAIPVQRLQGKRKLSQNRSAADMAGVRDGLAASQDANDQHIARLMSEGSSS

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=108, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 23106; Mature: 23106

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIPAAFNDNDTPSLHQQMEQTRLAILVTDGAEGLQATHLPLLLRRDEGSYGTLYGHLAK
CCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCCCEECCCEEEEEECCCCCCHHHHHHHC
ANPQWQQLSSGAEALVIFPGGDAYVSPSFYPSKREHGKVVPTWNYVAVHAYGQAEVFTDA
CCCHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
AQLHQLLADLTHRHESDRAQPWSIDDAPADYIAKMLGAIVGFAIPVQRLQGKRKLSQNRS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AADMAGVRDGLAASQDANDQHIARLMSEGSSS
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MYIPAAFNDNDTPSLHQQMEQTRLAILVTDGAEGLQATHLPLLLRRDEGSYGTLYGHLAK
CCCCCCCCCCCCHHHHHHHHHCEEEEEEECCCCCCEECCCEEEEEECCCCCCHHHHHHHC
ANPQWQQLSSGAEALVIFPGGDAYVSPSFYPSKREHGKVVPTWNYVAVHAYGQAEVFTDA
CCCHHHHHCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHH
AQLHQLLADLTHRHESDRAQPWSIDDAPADYIAKMLGAIVGFAIPVQRLQGKRKLSQNRS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AADMAGVRDGLAASQDANDQHIARLMSEGSSS
HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]