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The map label for this gene is 66048195

Identifier: 66048195

GI number: 66048195

Start: 5895050

End: 5896006

Strand: Direct

Name: 66048195

Synonym: Psyr_4971

Alternate gene names: NA

Gene position: 5895050-5896006 (Clockwise)

Preceding gene: 66048194

Following gene: 66048196

Centisome position: 96.74

GC content: 46.08

Gene sequence:

>957_bases
ATGCCAAGCAAATCACAAATCGACTTTGCATATGAGCGGTTGAAATTTCAATGCGCACACGAATCTGACGCCCTGCAAAA
ACCAAATGACAATGCGGACATCCTTTATAAATATGCGCTTTTTCTAGAAAAACAAAAAAAAGAAAAAGACTACGATCAGA
TTGCAAAGTTTTATCGCATTTCGGCCGCACACGATCATTACAAATCAGCCACCAACTTACAAAACCTACTTTCAAGTGGT
CGCGCAAAATCACCAGACCCTAGGAAAGAAACGATCGACCTAGTGGAAAAATACATTTCCCAAAACGTGCCCGGCGCCTA
CTATGACATGGGGCATTATCTTGAAATAGGATATGGAGTAAAAAAAGATATTTCCAGCTCTCGCGCGTATTTTCGCAGAG
CCGCTGACCTAGGTAATCCCGATGCACAATATTATATAGCCGAGTTGTTAACCAAAGTCCCTAATACTGCAGACATAATG
CAGTCCATGTACAAGTGCGCGATGGAACAAGGCCATTCGATGGCTGGAAGAAGATACGCTAGCTATGCCTCAGTCACAAA
CGGATATAAGGATGCCGTCGCCGGTTACCAACTCTCAACCAAGAATGGCGACAACATTAGCGCTCGTCTTCTGGCGCGTG
GCTTCGAAGGACCAGAACCTTCTGACGAATTTTATTATTTGGCATTAGATAAAGATGAAGAGCGTGTCGCAAGATACGAT
AAAATCAGCAATTTCTTGGTTCGTCATGAACACTTGGGCGCCAAGATCCCTGATCTGGATGACATTGTTCCACTGCCCCC
AGCACCGTTGCCCGAGTGGGACGGCACGTTCAAATGGAAGCGTGATCGTGATGCCGCTGCACCACCTTCGCCTCCATCGG
AAGAGCTGATTCAACGGATGGCGGCAGAAAAGAACCTCGATCCTGAAACAGGTCTTCCATTACCTGCATCGAAGTGA

Upstream 100 bases:

>100_bases
AAAGCAGCGCTAGGAAAAACTTGGATTAATAATGAAGCGCAAACTAATAATCTTATACGTACTACTACTTCTAACAGCTT
GCTCAAAAAAGGACGAAGAG

Downstream 100 bases:

>100_bases
AAAAGACATGCGTTGAATCATACCCGACACATGCGTAGAGGAAGGGACTCCAATTCCGGGAAGCTTTTCTCACAAATAGG
CACATACAAGGGAATGGAAA

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: Lipoprotein; Sel1 Repeat-Containing Protein; Sel1 Domain Protein Repeat-Containing Protein; TPR Repeat-Containing Protein; Sel1-Like Lipoprotein; TPR Repeat Containing SEL1 Subfamily; Sel1-Like Repeat

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPSKSQIDFAYERLKFQCAHESDALQKPNDNADILYKYALFLEKQKKEKDYDQIAKFYRISAAHDHYKSATNLQNLLSSG
RAKSPDPRKETIDLVEKYISQNVPGAYYDMGHYLEIGYGVKKDISSSRAYFRRAADLGNPDAQYYIAELLTKVPNTADIM
QSMYKCAMEQGHSMAGRRYASYASVTNGYKDAVAGYQLSTKNGDNISARLLARGFEGPEPSDEFYYLALDKDEERVARYD
KISNFLVRHEHLGAKIPDLDDIVPLPPAPLPEWDGTFKWKRDRDAAAPPSPPSEELIQRMAAEKNLDPETGLPLPASK

Sequences:

>Translated_318_residues
MPSKSQIDFAYERLKFQCAHESDALQKPNDNADILYKYALFLEKQKKEKDYDQIAKFYRISAAHDHYKSATNLQNLLSSG
RAKSPDPRKETIDLVEKYISQNVPGAYYDMGHYLEIGYGVKKDISSSRAYFRRAADLGNPDAQYYIAELLTKVPNTADIM
QSMYKCAMEQGHSMAGRRYASYASVTNGYKDAVAGYQLSTKNGDNISARLLARGFEGPEPSDEFYYLALDKDEERVARYD
KISNFLVRHEHLGAKIPDLDDIVPLPPAPLPEWDGTFKWKRDRDAAAPPSPPSEELIQRMAAEKNLDPETGLPLPASK
>Mature_317_residues
PSKSQIDFAYERLKFQCAHESDALQKPNDNADILYKYALFLEKQKKEKDYDQIAKFYRISAAHDHYKSATNLQNLLSSGR
AKSPDPRKETIDLVEKYISQNVPGAYYDMGHYLEIGYGVKKDISSSRAYFRRAADLGNPDAQYYIAELLTKVPNTADIMQ
SMYKCAMEQGHSMAGRRYASYASVTNGYKDAVAGYQLSTKNGDNISARLLARGFEGPEPSDEFYYLALDKDEERVARYDK
ISNFLVRHEHLGAKIPDLDDIVPLPPAPLPEWDGTFKWKRDRDAAAPPSPPSEELIQRMAAEKNLDPETGLPLPASK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35968; Mature: 35836

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKSQIDFAYERLKFQCAHESDALQKPNDNADILYKYALFLEKQKKEKDYDQIAKFYRI
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SAAHDHYKSATNLQNLLSSGRAKSPDPRKETIDLVEKYISQNVPGAYYDMGHYLEIGYGV
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEEECCCH
KKDISSSRAYFRRAADLGNPDAQYYIAELLTKVPNTADIMQSMYKCAMEQGHSMAGRRYA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
SYASVTNGYKDAVAGYQLSTKNGDNISARLLARGFEGPEPSDEFYYLALDKDEERVARYD
HHHHHHCCHHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHH
KISNFLVRHEHLGAKIPDLDDIVPLPPAPLPEWDGTFKWKRDRDAAAPPSPPSEELIQRM
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AAEKNLDPETGLPLPASK
HHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSKSQIDFAYERLKFQCAHESDALQKPNDNADILYKYALFLEKQKKEKDYDQIAKFYRI
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SAAHDHYKSATNLQNLLSSGRAKSPDPRKETIDLVEKYISQNVPGAYYDMGHYLEIGYGV
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEEEECCCH
KKDISSSRAYFRRAADLGNPDAQYYIAELLTKVPNTADIMQSMYKCAMEQGHSMAGRRYA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHH
SYASVTNGYKDAVAGYQLSTKNGDNISARLLARGFEGPEPSDEFYYLALDKDEERVARYD
HHHHHHCCHHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHH
KISNFLVRHEHLGAKIPDLDDIVPLPPAPLPEWDGTFKWKRDRDAAAPPSPPSEELIQRM
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AAEKNLDPETGLPLPASK
HHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA